Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3337 and Psest_3338 are separated by 109 nucleotides Psest_3338 and Psest_3339 are separated by 33 nucleotides
Psest_3337: Psest_3337 - Predicted permeases, at 3,501,720 to 3,502,661
_3337
Psest_3338: Psest_3338 - Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain, at 3,502,771 to 3,503,331
_3338
Psest_3339: Psest_3339 - Signal transduction histidine kinase, at 3,503,365 to 3,504,618
_3339
Position (kb)
3502
3503
3504 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7 at 3501.877 kb on + strand, within Psest_3337 at 3501.878 kb on - strand, within Psest_3337 at 3501.878 kb on - strand, within Psest_3337 at 3502.038 kb on + strand, within Psest_3337 at 3502.069 kb on + strand, within Psest_3337 at 3502.070 kb on - strand, within Psest_3337 at 3502.114 kb on + strand, within Psest_3337 at 3502.115 kb on - strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.210 kb on + strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.211 kb on - strand, within Psest_3337 at 3502.243 kb on + strand, within Psest_3337 at 3502.243 kb on + strand, within Psest_3337 at 3502.243 kb on + strand, within Psest_3337 at 3502.243 kb on + strand, within Psest_3337 at 3502.243 kb on + strand, within Psest_3337 at 3502.244 kb on - strand, within Psest_3337 at 3502.244 kb on - strand, within Psest_3337 at 3502.244 kb on - strand, within Psest_3337 at 3502.301 kb on - strand, within Psest_3337 at 3502.301 kb on - strand, within Psest_3337 at 3502.363 kb on + strand, within Psest_3337 at 3502.363 kb on + strand, within Psest_3337 at 3502.363 kb on + strand, within Psest_3337 at 3502.363 kb on + strand, within Psest_3337 at 3502.363 kb on + strand, within Psest_3337 at 3502.364 kb on - strand, within Psest_3337 at 3502.447 kb on + strand, within Psest_3337 at 3502.447 kb on + strand, within Psest_3337 at 3502.447 kb on + strand, within Psest_3337 at 3502.448 kb on - strand, within Psest_3337 at 3502.448 kb on - strand, within Psest_3337 at 3502.502 kb on + strand, within Psest_3337 at 3502.503 kb on - strand, within Psest_3337 at 3502.503 kb on - strand, within Psest_3337 at 3502.551 kb on - strand, within Psest_3337 at 3502.678 kb on + strand at 3502.678 kb on + strand at 3502.678 kb on + strand at 3502.678 kb on + strand at 3502.678 kb on + strand at 3502.678 kb on + strand at 3502.678 kb on + strand at 3502.678 kb on + strand at 3502.679 kb on - strand at 3502.679 kb on - strand at 3502.679 kb on - strand at 3502.679 kb on - strand at 3502.679 kb on - strand at 3502.679 kb on - strand at 3502.679 kb on - strand at 3502.695 kb on + strand at 3502.695 kb on + strand at 3502.696 kb on - strand at 3502.885 kb on - strand, within Psest_3338 at 3503.004 kb on - strand, within Psest_3338 at 3503.004 kb on - strand, within Psest_3338 at 3503.167 kb on - strand, within Psest_3338 at 3503.429 kb on + strand at 3503.429 kb on + strand at 3503.429 kb on + strand at 3503.430 kb on - strand at 3503.430 kb on - strand at 3503.733 kb on - strand, within Psest_3339 at 3503.767 kb on + strand, within Psest_3339 at 3503.920 kb on - strand, within Psest_3339 at 3503.921 kb on + strand, within Psest_3339 at 3503.922 kb on - strand, within Psest_3339 at 3504.216 kb on + strand, within Psest_3339 at 3504.216 kb on + strand, within Psest_3339 at 3504.216 kb on + strand, within Psest_3339 at 3504.217 kb on - strand, within Psest_3339 at 3504.217 kb on - strand, within Psest_3339 at 3504.217 kb on - strand, within Psest_3339 at 3504.219 kb on - strand, within Psest_3339 at 3504.255 kb on - strand, within Psest_3339 at 3504.255 kb on - strand, within Psest_3339 at 3504.299 kb on + strand, within Psest_3339 at 3504.302 kb on + strand, within Psest_3339 at 3504.303 kb on - strand, within Psest_3339 at 3504.303 kb on - strand, within Psest_3339
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,501,877 + Psest_3337 0.17 -0.4 3,501,878 - Psest_3337 0.17 +2.1 3,501,878 - Psest_3337 0.17 -0.1 3,502,038 + Psest_3337 0.34 +1.3 3,502,069 + Psest_3337 0.37 +0.7 3,502,070 - Psest_3337 0.37 +0.6 3,502,114 + Psest_3337 0.42 +1.0 3,502,115 - Psest_3337 0.42 +1.3 3,502,210 + Psest_3337 0.52 -1.9 3,502,210 + Psest_3337 0.52 +1.2 3,502,210 + Psest_3337 0.52 +0.3 3,502,210 + Psest_3337 0.52 -0.6 3,502,210 + Psest_3337 0.52 -2.6 3,502,210 + Psest_3337 0.52 +1.9 3,502,210 + Psest_3337 0.52 +0.4 3,502,210 + Psest_3337 0.52 +0.9 3,502,210 + Psest_3337 0.52 +0.1 3,502,210 + Psest_3337 0.52 +2.1 3,502,210 + Psest_3337 0.52 -0.9 3,502,210 + Psest_3337 0.52 -0.6 3,502,210 + Psest_3337 0.52 +0.2 3,502,210 + Psest_3337 0.52 -1.2 3,502,210 + Psest_3337 0.52 +0.6 3,502,210 + Psest_3337 0.52 +0.9 3,502,210 + Psest_3337 0.52 +0.2 3,502,210 + Psest_3337 0.52 -0.0 3,502,210 + Psest_3337 0.52 +1.4 3,502,210 + Psest_3337 0.52 +0.3 3,502,211 - Psest_3337 0.52 +1.2 3,502,211 - Psest_3337 0.52 +1.5 3,502,211 - Psest_3337 0.52 +0.3 3,502,211 - Psest_3337 0.52 -2.0 3,502,211 - Psest_3337 0.52 +1.0 3,502,211 - Psest_3337 0.52 +0.6 3,502,211 - Psest_3337 0.52 -0.4 3,502,211 - Psest_3337 0.52 +2.9 3,502,211 - Psest_3337 0.52 -0.3 3,502,211 - Psest_3337 0.52 +0.1 3,502,211 - Psest_3337 0.52 +0.7 3,502,211 - Psest_3337 0.52 +1.1 3,502,211 - Psest_3337 0.52 -2.5 3,502,211 - Psest_3337 0.52 +2.3 3,502,211 - Psest_3337 0.52 -1.0 3,502,211 - Psest_3337 0.52 -0.3 3,502,243 + Psest_3337 0.56 +1.7 3,502,243 + Psest_3337 0.56 -2.8 3,502,243 + Psest_3337 0.56 +0.9 3,502,243 + Psest_3337 0.56 -1.2 3,502,243 + Psest_3337 0.56 +0.8 3,502,244 - Psest_3337 0.56 -0.4 3,502,244 - Psest_3337 0.56 +0.6 3,502,244 - Psest_3337 0.56 +1.4 3,502,301 - Psest_3337 0.62 +0.3 3,502,301 - Psest_3337 0.62 +0.1 3,502,363 + Psest_3337 0.68 -1.0 3,502,363 + Psest_3337 0.68 -2.0 3,502,363 + Psest_3337 0.68 +0.1 3,502,363 + Psest_3337 0.68 +1.4 3,502,363 + Psest_3337 0.68 -0.7 3,502,364 - Psest_3337 0.68 +0.2 3,502,447 + Psest_3337 0.77 +0.2 3,502,447 + Psest_3337 0.77 +1.0 3,502,447 + Psest_3337 0.77 -2.0 3,502,448 - Psest_3337 0.77 -1.2 3,502,448 - Psest_3337 0.77 +1.4 3,502,502 + Psest_3337 0.83 +1.2 3,502,503 - Psest_3337 0.83 +1.0 3,502,503 - Psest_3337 0.83 -0.8 3,502,551 - Psest_3337 0.88 +0.5 3,502,678 + -1.6 3,502,678 + +1.9 3,502,678 + -0.6 3,502,678 + -0.8 3,502,678 + +1.0 3,502,678 + +0.4 3,502,678 + +2.2 3,502,678 + -1.4 3,502,679 - -1.2 3,502,679 - +1.7 3,502,679 - -0.6 3,502,679 - +1.2 3,502,679 - +0.4 3,502,679 - +1.5 3,502,679 - +0.6 3,502,695 + +0.3 3,502,695 + +1.0 3,502,696 - +0.5 3,502,885 - Psest_3338 0.20 +3.4 3,503,004 - Psest_3338 0.42 +1.3 3,503,004 - Psest_3338 0.42 +3.7 3,503,167 - Psest_3338 0.71 +7.0 3,503,429 + -0.4 3,503,429 + +2.7 3,503,429 + +1.4 3,503,430 - +3.2 3,503,430 - +0.7 3,503,733 - Psest_3339 0.29 +1.5 3,503,767 + Psest_3339 0.32 +2.0 3,503,920 - Psest_3339 0.44 +1.0 3,503,921 + Psest_3339 0.44 +3.0 3,503,922 - Psest_3339 0.44 +3.1 3,504,216 + Psest_3339 0.68 +4.7 3,504,216 + Psest_3339 0.68 +4.2 3,504,216 + Psest_3339 0.68 +1.4 3,504,217 - Psest_3339 0.68 +0.2 3,504,217 - Psest_3339 0.68 -1.8 3,504,217 - Psest_3339 0.68 +2.6 3,504,219 - Psest_3339 0.68 -1.8 3,504,255 - Psest_3339 0.71 -1.3 3,504,255 - Psest_3339 0.71 -1.4 3,504,299 + Psest_3339 0.74 +5.7 3,504,302 + Psest_3339 0.75 +1.5 3,504,303 - Psest_3339 0.75 +0.7 3,504,303 - Psest_3339 0.75 -1.8
Or see this region's nucleotide sequence