Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3210 and Psest_3211 are separated by 137 nucleotides Psest_3211 and Psest_3212 are separated by 114 nucleotides Psest_3212 and Psest_3213 are separated by 237 nucleotides
Psest_3210: Psest_3210 - Transcriptional regulator, at 3,378,815 to 3,379,474
_3210
Psest_3211: Psest_3211 - Glutathione peroxidase, at 3,379,612 to 3,380,094
_3211
Psest_3212: Psest_3212 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 3,380,209 to 3,380,694
_3212
Psest_3213: Psest_3213 - acetate kinase, at 3,380,932 to 3,382,119
_3213
Position (kb)
3380
3381 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.284 kb on + strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.285 kb on - strand, within Psest_3210 at 3379.290 kb on + strand, within Psest_3210 at 3379.290 kb on + strand, within Psest_3210 at 3379.290 kb on + strand, within Psest_3210 at 3379.290 kb on + strand, within Psest_3210 at 3379.290 kb on + strand, within Psest_3210 at 3379.291 kb on - strand, within Psest_3210 at 3379.291 kb on - strand, within Psest_3210 at 3379.291 kb on - strand, within Psest_3210 at 3379.291 kb on - strand, within Psest_3210 at 3379.291 kb on - strand, within Psest_3210 at 3379.332 kb on + strand, within Psest_3210 at 3379.332 kb on + strand, within Psest_3210 at 3379.332 kb on + strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.333 kb on - strand, within Psest_3210 at 3379.338 kb on + strand, within Psest_3210 at 3379.339 kb on - strand, within Psest_3210 at 3379.339 kb on - strand, within Psest_3210 at 3379.339 kb on - strand, within Psest_3210 at 3379.339 kb on - strand, within Psest_3210 at 3379.485 kb on + strand at 3379.839 kb on - strand, within Psest_3211 at 3379.940 kb on + strand, within Psest_3211 at 3380.356 kb on + strand, within Psest_3212 at 3380.356 kb on + strand, within Psest_3212 at 3380.356 kb on + strand, within Psest_3212 at 3380.356 kb on + strand, within Psest_3212 at 3380.357 kb on - strand, within Psest_3212 at 3380.357 kb on - strand, within Psest_3212 at 3380.357 kb on - strand, within Psest_3212 at 3380.357 kb on - strand, within Psest_3212 at 3380.357 kb on - strand, within Psest_3212 at 3380.357 kb on - strand, within Psest_3212 at 3380.464 kb on - strand, within Psest_3212 at 3380.483 kb on + strand, within Psest_3212 at 3380.484 kb on - strand, within Psest_3212 at 3380.595 kb on - strand, within Psest_3212 at 3380.657 kb on + strand at 3380.680 kb on - strand at 3380.809 kb on + strand at 3380.809 kb on + strand at 3380.809 kb on + strand at 3380.809 kb on + strand at 3380.810 kb on - strand at 3380.810 kb on - strand at 3380.810 kb on - strand at 3380.810 kb on - strand at 3380.810 kb on - strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.822 kb on + strand at 3380.823 kb on - strand at 3380.823 kb on - strand at 3380.823 kb on - strand at 3380.823 kb on - strand at 3380.823 kb on - strand at 3380.823 kb on - strand at 3380.823 kb on - strand at 3380.830 kb on + strand at 3380.831 kb on - strand at 3380.912 kb on + strand at 3380.913 kb on - strand at 3380.943 kb on + strand at 3380.943 kb on + strand at 3380.958 kb on + strand at 3380.959 kb on - strand at 3380.959 kb on - strand at 3381.020 kb on + strand at 3381.021 kb on - strand at 3381.021 kb on - strand at 3381.350 kb on + strand, within Psest_3213 at 3381.351 kb on - strand, within Psest_3213 at 3381.351 kb on - strand, within Psest_3213 at 3381.351 kb on - strand, within Psest_3213 at 3381.424 kb on + strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.522 kb on + strand, within Psest_3213 at 3381.522 kb on + strand, within Psest_3213 at 3381.523 kb on - strand, within Psest_3213 at 3381.523 kb on - strand, within Psest_3213 at 3381.523 kb on - strand, within Psest_3213
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,379,284 + Psest_3210 0.71 -0.2 3,379,284 + Psest_3210 0.71 -1.2 3,379,284 + Psest_3210 0.71 +0.4 3,379,284 + Psest_3210 0.71 +0.1 3,379,284 + Psest_3210 0.71 -1.2 3,379,284 + Psest_3210 0.71 -2.8 3,379,284 + Psest_3210 0.71 -0.4 3,379,284 + Psest_3210 0.71 -3.7 3,379,284 + Psest_3210 0.71 +0.5 3,379,284 + Psest_3210 0.71 -1.1 3,379,284 + Psest_3210 0.71 +0.4 3,379,284 + Psest_3210 0.71 -1.0 3,379,284 + Psest_3210 0.71 +0.2 3,379,284 + Psest_3210 0.71 +1.0 3,379,285 - Psest_3210 0.71 +1.1 3,379,285 - Psest_3210 0.71 -0.2 3,379,285 - Psest_3210 0.71 +0.0 3,379,285 - Psest_3210 0.71 -0.4 3,379,285 - Psest_3210 0.71 -0.5 3,379,285 - Psest_3210 0.71 +0.6 3,379,285 - Psest_3210 0.71 -0.7 3,379,285 - Psest_3210 0.71 -2.0 3,379,285 - Psest_3210 0.71 +0.7 3,379,285 - Psest_3210 0.71 -0.9 3,379,285 - Psest_3210 0.71 -1.7 3,379,285 - Psest_3210 0.71 +0.2 3,379,290 + Psest_3210 0.72 +0.4 3,379,290 + Psest_3210 0.72 +0.4 3,379,290 + Psest_3210 0.72 -0.6 3,379,290 + Psest_3210 0.72 -0.9 3,379,290 + Psest_3210 0.72 +0.4 3,379,291 - Psest_3210 0.72 -1.0 3,379,291 - Psest_3210 0.72 -1.5 3,379,291 - Psest_3210 0.72 +0.8 3,379,291 - Psest_3210 0.72 +0.5 3,379,291 - Psest_3210 0.72 +0.1 3,379,332 + Psest_3210 0.78 -0.1 3,379,332 + Psest_3210 0.78 -2.5 3,379,332 + Psest_3210 0.78 -1.8 3,379,333 - Psest_3210 0.78 +0.2 3,379,333 - Psest_3210 0.78 -1.8 3,379,333 - Psest_3210 0.78 -0.2 3,379,333 - Psest_3210 0.78 +0.4 3,379,333 - Psest_3210 0.78 -0.5 3,379,333 - Psest_3210 0.78 +1.9 3,379,333 - Psest_3210 0.78 -0.0 3,379,333 - Psest_3210 0.78 +0.1 3,379,333 - Psest_3210 0.78 -0.3 3,379,333 - Psest_3210 0.78 -2.9 3,379,338 + Psest_3210 0.79 -1.8 3,379,339 - Psest_3210 0.79 -1.8 3,379,339 - Psest_3210 0.79 +0.3 3,379,339 - Psest_3210 0.79 +1.3 3,379,339 - Psest_3210 0.79 -0.1 3,379,485 + -1.6 3,379,839 - Psest_3211 0.47 +0.7 3,379,940 + Psest_3211 0.68 +0.1 3,380,356 + Psest_3212 0.30 +1.2 3,380,356 + Psest_3212 0.30 +2.2 3,380,356 + Psest_3212 0.30 +0.3 3,380,356 + Psest_3212 0.30 +2.4 3,380,357 - Psest_3212 0.30 -0.8 3,380,357 - Psest_3212 0.30 +1.4 3,380,357 - Psest_3212 0.30 +0.7 3,380,357 - Psest_3212 0.30 +4.2 3,380,357 - Psest_3212 0.30 +1.4 3,380,357 - Psest_3212 0.30 -0.9 3,380,464 - Psest_3212 0.52 -1.6 3,380,483 + Psest_3212 0.56 -0.5 3,380,484 - Psest_3212 0.57 +1.4 3,380,595 - Psest_3212 0.79 +3.1 3,380,657 + -2.6 3,380,680 - +1.2 3,380,809 + -3.3 3,380,809 + -2.0 3,380,809 + -0.2 3,380,809 + +2.2 3,380,810 - -0.0 3,380,810 - -1.3 3,380,810 - -2.8 3,380,810 - +2.3 3,380,810 - -1.7 3,380,822 + +0.4 3,380,822 + -1.9 3,380,822 + -2.6 3,380,822 + -0.6 3,380,822 + -1.0 3,380,822 + -1.4 3,380,822 + +0.8 3,380,822 + -1.4 3,380,822 + -2.5 3,380,822 + -3.2 3,380,823 - +0.5 3,380,823 - +0.8 3,380,823 - +0.1 3,380,823 - -0.1 3,380,823 - +0.3 3,380,823 - -1.7 3,380,823 - +1.8 3,380,830 + -2.0 3,380,831 - +0.5 3,380,912 + +0.4 3,380,913 - +0.3 3,380,943 + +0.1 3,380,943 + +0.4 3,380,958 + +1.7 3,380,959 - -2.0 3,380,959 - +0.3 3,381,020 + +0.0 3,381,021 - -1.0 3,381,021 - +1.3 3,381,350 + Psest_3213 0.35 -0.1 3,381,351 - Psest_3213 0.35 +2.6 3,381,351 - Psest_3213 0.35 +0.0 3,381,351 - Psest_3213 0.35 +0.5 3,381,424 + Psest_3213 0.41 +1.1 3,381,425 - Psest_3213 0.41 -0.8 3,381,425 - Psest_3213 0.41 +0.6 3,381,425 - Psest_3213 0.41 -1.3 3,381,425 - Psest_3213 0.41 -1.5 3,381,425 - Psest_3213 0.41 +0.7 3,381,522 + Psest_3213 0.50 -2.2 3,381,522 + Psest_3213 0.50 +0.4 3,381,523 - Psest_3213 0.50 +0.9 3,381,523 - Psest_3213 0.50 -2.7 3,381,523 - Psest_3213 0.50 -1.6
Or see this region's nucleotide sequence