Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2861 and Psest_2862 are separated by 45 nucleotides Psest_2862 and Psest_2863 are separated by 113 nucleotides Psest_2863 and Psest_2864 are separated by 24 nucleotides Psest_2864 and Psest_2865 are separated by 245 nucleotides
Psest_2861: Psest_2861 - Uncharacterized protein conserved in bacteria, at 3,051,705 to 3,052,190
_2861
Psest_2862: Psest_2862 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1, at 3,052,236 to 3,053,012
_2862
Psest_2863: Psest_2863 - Transcriptional regulator, at 3,053,126 to 3,054,052
_2863
Psest_2864: Psest_2864 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 3,054,077 to 3,054,727
_2864
Psest_2865: Psest_2865 - Predicted permease, DMT superfamily, at 3,054,973 to 3,055,884
_2865
Position (kb)
3053
3054
3055 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 3052.182 kb on + strand at 3052.182 kb on + strand at 3052.183 kb on - strand at 3052.183 kb on - strand at 3052.183 kb on - strand at 3052.183 kb on - strand at 3052.268 kb on - strand at 3052.268 kb on - strand at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.576 kb on + strand, within Psest_2862 at 3052.618 kb on + strand, within Psest_2862 at 3052.618 kb on + strand, within Psest_2862 at 3052.619 kb on - strand, within Psest_2862 at 3052.675 kb on - strand, within Psest_2862 at 3052.675 kb on - strand, within Psest_2862 at 3052.681 kb on + strand, within Psest_2862 at 3052.681 kb on + strand, within Psest_2862 at 3052.682 kb on - strand, within Psest_2862 at 3052.682 kb on - strand, within Psest_2862 at 3052.682 kb on - strand, within Psest_2862 at 3052.826 kb on - strand, within Psest_2862 at 3052.835 kb on - strand, within Psest_2862 at 3052.835 kb on - strand, within Psest_2862 at 3052.835 kb on - strand, within Psest_2862 at 3052.850 kb on + strand, within Psest_2862 at 3052.851 kb on - strand, within Psest_2862 at 3052.855 kb on + strand, within Psest_2862 at 3052.856 kb on - strand, within Psest_2862 at 3053.049 kb on + strand at 3053.065 kb on - strand at 3053.065 kb on - strand at 3053.121 kb on + strand at 3053.435 kb on + strand, within Psest_2863 at 3053.435 kb on + strand, within Psest_2863 at 3053.435 kb on + strand, within Psest_2863 at 3053.435 kb on + strand, within Psest_2863 at 3053.436 kb on - strand, within Psest_2863 at 3053.622 kb on + strand, within Psest_2863 at 3053.795 kb on - strand, within Psest_2863 at 3053.795 kb on - strand, within Psest_2863 at 3053.930 kb on + strand, within Psest_2863 at 3053.930 kb on + strand, within Psest_2863 at 3053.930 kb on + strand, within Psest_2863 at 3053.931 kb on - strand, within Psest_2863 at 3053.931 kb on - strand, within Psest_2863 at 3053.931 kb on - strand, within Psest_2863 at 3053.931 kb on - strand, within Psest_2863 at 3053.955 kb on - strand, within Psest_2863 at 3054.107 kb on + strand at 3054.107 kb on + strand at 3054.107 kb on + strand at 3054.133 kb on + strand at 3054.134 kb on - strand at 3054.134 kb on - strand at 3054.499 kb on - strand, within Psest_2864 at 3054.635 kb on + strand, within Psest_2864 at 3054.635 kb on + strand, within Psest_2864 at 3054.636 kb on - strand, within Psest_2864 at 3054.636 kb on - strand, within Psest_2864 at 3054.636 kb on - strand, within Psest_2864 at 3054.636 kb on - strand, within Psest_2864 at 3054.636 kb on - strand, within Psest_2864 at 3054.710 kb on + strand at 3054.711 kb on - strand at 3054.711 kb on - strand at 3054.711 kb on - strand at 3054.711 kb on - strand at 3054.711 kb on - strand at 3054.711 kb on - strand at 3054.747 kb on - strand at 3054.837 kb on - strand at 3054.873 kb on + strand at 3054.873 kb on + strand at 3054.873 kb on + strand at 3054.873 kb on + strand at 3054.874 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.934 kb on + strand at 3054.934 kb on + strand at 3054.937 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,052,182 + -0.7 3,052,182 + +0.7 3,052,183 - -0.8 3,052,183 - -0.2 3,052,183 - +0.2 3,052,183 - +1.0 3,052,268 - +1.6 3,052,268 - +2.7 3,052,486 + Psest_2862 0.32 +3.3 3,052,486 + Psest_2862 0.32 +3.1 3,052,486 + Psest_2862 0.32 +1.4 3,052,486 + Psest_2862 0.32 +5.0 3,052,486 + Psest_2862 0.32 +3.6 3,052,486 + Psest_2862 0.32 +1.5 3,052,486 + Psest_2862 0.32 +4.0 3,052,486 + Psest_2862 0.32 +2.7 3,052,486 + Psest_2862 0.32 +4.2 3,052,486 + Psest_2862 0.32 +4.0 3,052,487 - Psest_2862 0.32 +1.9 3,052,487 - Psest_2862 0.32 +4.6 3,052,487 - Psest_2862 0.32 +1.4 3,052,487 - Psest_2862 0.32 +4.0 3,052,487 - Psest_2862 0.32 +3.0 3,052,487 - Psest_2862 0.32 +3.4 3,052,487 - Psest_2862 0.32 +4.4 3,052,487 - Psest_2862 0.32 +1.8 3,052,487 - Psest_2862 0.32 +3.5 3,052,487 - Psest_2862 0.32 +1.4 3,052,576 + Psest_2862 0.44 +3.8 3,052,618 + Psest_2862 0.49 +1.6 3,052,618 + Psest_2862 0.49 +1.4 3,052,619 - Psest_2862 0.49 -1.0 3,052,675 - Psest_2862 0.56 +1.2 3,052,675 - Psest_2862 0.56 +2.0 3,052,681 + Psest_2862 0.57 +3.5 3,052,681 + Psest_2862 0.57 +5.3 3,052,682 - Psest_2862 0.57 +3.4 3,052,682 - Psest_2862 0.57 +3.0 3,052,682 - Psest_2862 0.57 +6.1 3,052,826 - Psest_2862 0.76 +1.7 3,052,835 - Psest_2862 0.77 +1.5 3,052,835 - Psest_2862 0.77 +0.0 3,052,835 - Psest_2862 0.77 +3.2 3,052,850 + Psest_2862 0.79 +3.9 3,052,851 - Psest_2862 0.79 +4.4 3,052,855 + Psest_2862 0.80 +2.1 3,052,856 - Psest_2862 0.80 +0.0 3,053,049 + +0.5 3,053,065 - +1.7 3,053,065 - -1.2 3,053,121 + +3.3 3,053,435 + Psest_2863 0.33 +5.1 3,053,435 + Psest_2863 0.33 +2.7 3,053,435 + Psest_2863 0.33 +3.8 3,053,435 + Psest_2863 0.33 +1.8 3,053,436 - Psest_2863 0.33 -0.4 3,053,622 + Psest_2863 0.54 +2.5 3,053,795 - Psest_2863 0.72 +0.7 3,053,795 - Psest_2863 0.72 +0.9 3,053,930 + Psest_2863 0.87 +1.4 3,053,930 + Psest_2863 0.87 +1.8 3,053,930 + Psest_2863 0.87 +3.2 3,053,931 - Psest_2863 0.87 -2.1 3,053,931 - Psest_2863 0.87 +1.4 3,053,931 - Psest_2863 0.87 +2.2 3,053,931 - Psest_2863 0.87 +1.1 3,053,955 - Psest_2863 0.89 +3.7 3,054,107 + +0.4 3,054,107 + -2.7 3,054,107 + -3.0 3,054,133 + -0.5 3,054,134 - +0.8 3,054,134 - -0.2 3,054,499 - Psest_2864 0.65 +1.0 3,054,635 + Psest_2864 0.86 +0.8 3,054,635 + Psest_2864 0.86 +0.6 3,054,636 - Psest_2864 0.86 -0.1 3,054,636 - Psest_2864 0.86 +0.8 3,054,636 - Psest_2864 0.86 -0.8 3,054,636 - Psest_2864 0.86 -0.2 3,054,636 - Psest_2864 0.86 +0.7 3,054,710 + -0.8 3,054,711 - -0.3 3,054,711 - +0.7 3,054,711 - +1.7 3,054,711 - -0.1 3,054,711 - -0.2 3,054,711 - -0.7 3,054,747 - +1.1 3,054,837 - +0.3 3,054,873 + +1.0 3,054,873 + +1.8 3,054,873 + -0.6 3,054,873 + +1.8 3,054,874 - -0.0 3,054,913 - +2.2 3,054,913 - -0.3 3,054,913 - +1.8 3,054,913 - +0.5 3,054,913 - -1.1 3,054,913 - +1.7 3,054,913 - +0.5 3,054,913 - +0.0 3,054,913 - -0.2 3,054,934 + -0.8 3,054,934 + +0.5 3,054,937 - +1.6
Or see this region's nucleotide sequence