Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2860 and Psest_2861 are separated by 1 nucleotides Psest_2861 and Psest_2862 are separated by 45 nucleotides Psest_2862 and Psest_2863 are separated by 113 nucleotides
Psest_2860: Psest_2860 - hypothetical protein, at 3,051,206 to 3,051,703
_2860
Psest_2861: Psest_2861 - Uncharacterized protein conserved in bacteria, at 3,051,705 to 3,052,190
_2861
Psest_2862: Psest_2862 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1, at 3,052,236 to 3,053,012
_2862
Psest_2863: Psest_2863 - Transcriptional regulator, at 3,053,126 to 3,054,052
_2863
Position (kb)
3052
3053
3054 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 3051.266 kb on + strand, within Psest_2860 at 3051.285 kb on + strand, within Psest_2860 at 3051.285 kb on + strand, within Psest_2860 at 3051.548 kb on + strand, within Psest_2860 at 3051.549 kb on - strand, within Psest_2860 at 3051.549 kb on - strand, within Psest_2860 at 3051.549 kb on - strand, within Psest_2860 at 3051.549 kb on - strand, within Psest_2860 at 3051.614 kb on + strand, within Psest_2860 at 3051.615 kb on - strand, within Psest_2860 at 3051.629 kb on + strand, within Psest_2860 at 3051.629 kb on + strand, within Psest_2860 at 3051.630 kb on - strand, within Psest_2860 at 3051.692 kb on + strand at 3051.692 kb on + strand at 3051.731 kb on + strand at 3051.732 kb on - strand at 3051.780 kb on + strand, within Psest_2861 at 3051.780 kb on + strand, within Psest_2861 at 3051.781 kb on - strand, within Psest_2861 at 3051.814 kb on + strand, within Psest_2861 at 3051.814 kb on + strand, within Psest_2861 at 3051.840 kb on + strand, within Psest_2861 at 3051.840 kb on + strand, within Psest_2861 at 3051.840 kb on + strand, within Psest_2861 at 3051.840 kb on + strand, within Psest_2861 at 3051.840 kb on + strand, within Psest_2861 at 3051.841 kb on - strand, within Psest_2861 at 3051.841 kb on - strand, within Psest_2861 at 3051.861 kb on + strand, within Psest_2861 at 3051.861 kb on + strand, within Psest_2861 at 3051.862 kb on - strand, within Psest_2861 at 3051.862 kb on - strand, within Psest_2861 at 3051.973 kb on + strand, within Psest_2861 at 3051.973 kb on + strand, within Psest_2861 at 3051.973 kb on + strand, within Psest_2861 at 3051.973 kb on + strand, within Psest_2861 at 3051.973 kb on + strand, within Psest_2861 at 3051.974 kb on - strand, within Psest_2861 at 3051.974 kb on - strand, within Psest_2861 at 3051.974 kb on - strand, within Psest_2861 at 3052.089 kb on + strand, within Psest_2861 at 3052.090 kb on - strand, within Psest_2861 at 3052.090 kb on - strand, within Psest_2861 at 3052.090 kb on - strand, within Psest_2861 at 3052.090 kb on - strand, within Psest_2861 at 3052.108 kb on + strand, within Psest_2861 at 3052.182 kb on + strand at 3052.182 kb on + strand at 3052.183 kb on - strand at 3052.183 kb on - strand at 3052.183 kb on - strand at 3052.183 kb on - strand at 3052.268 kb on - strand at 3052.268 kb on - strand at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.486 kb on + strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.487 kb on - strand, within Psest_2862 at 3052.576 kb on + strand, within Psest_2862 at 3052.618 kb on + strand, within Psest_2862 at 3052.618 kb on + strand, within Psest_2862 at 3052.619 kb on - strand, within Psest_2862 at 3052.675 kb on - strand, within Psest_2862 at 3052.675 kb on - strand, within Psest_2862 at 3052.681 kb on + strand, within Psest_2862 at 3052.681 kb on + strand, within Psest_2862 at 3052.682 kb on - strand, within Psest_2862 at 3052.682 kb on - strand, within Psest_2862 at 3052.682 kb on - strand, within Psest_2862 at 3052.826 kb on - strand, within Psest_2862 at 3052.835 kb on - strand, within Psest_2862 at 3052.835 kb on - strand, within Psest_2862 at 3052.835 kb on - strand, within Psest_2862 at 3052.850 kb on + strand, within Psest_2862 at 3052.851 kb on - strand, within Psest_2862 at 3052.855 kb on + strand, within Psest_2862 at 3052.856 kb on - strand, within Psest_2862 at 3053.049 kb on + strand at 3053.065 kb on - strand at 3053.065 kb on - strand at 3053.121 kb on + strand at 3053.435 kb on + strand, within Psest_2863 at 3053.435 kb on + strand, within Psest_2863 at 3053.435 kb on + strand, within Psest_2863 at 3053.435 kb on + strand, within Psest_2863 at 3053.436 kb on - strand, within Psest_2863 at 3053.622 kb on + strand, within Psest_2863 at 3053.795 kb on - strand, within Psest_2863 at 3053.795 kb on - strand, within Psest_2863 at 3053.930 kb on + strand, within Psest_2863 at 3053.930 kb on + strand, within Psest_2863 at 3053.930 kb on + strand, within Psest_2863 at 3053.931 kb on - strand, within Psest_2863 at 3053.931 kb on - strand, within Psest_2863 at 3053.931 kb on - strand, within Psest_2863 at 3053.931 kb on - strand, within Psest_2863 at 3053.955 kb on - strand, within Psest_2863
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,051,266 + Psest_2860 0.12 -2.0 3,051,285 + Psest_2860 0.16 -0.6 3,051,285 + Psest_2860 0.16 +2.2 3,051,548 + Psest_2860 0.69 +0.1 3,051,549 - Psest_2860 0.69 -1.0 3,051,549 - Psest_2860 0.69 -2.0 3,051,549 - Psest_2860 0.69 -3.3 3,051,549 - Psest_2860 0.69 +0.6 3,051,614 + Psest_2860 0.82 +0.6 3,051,615 - Psest_2860 0.82 -1.5 3,051,629 + Psest_2860 0.85 -0.1 3,051,629 + Psest_2860 0.85 -2.3 3,051,630 - Psest_2860 0.85 -0.2 3,051,692 + -0.6 3,051,692 + +0.7 3,051,731 + +0.5 3,051,732 - -1.6 3,051,780 + Psest_2861 0.15 -0.2 3,051,780 + Psest_2861 0.15 -3.7 3,051,781 - Psest_2861 0.16 -0.1 3,051,814 + Psest_2861 0.22 -0.3 3,051,814 + Psest_2861 0.22 -0.4 3,051,840 + Psest_2861 0.28 +0.9 3,051,840 + Psest_2861 0.28 -1.4 3,051,840 + Psest_2861 0.28 +0.7 3,051,840 + Psest_2861 0.28 +0.6 3,051,840 + Psest_2861 0.28 +0.4 3,051,841 - Psest_2861 0.28 -1.0 3,051,841 - Psest_2861 0.28 -0.6 3,051,861 + Psest_2861 0.32 +0.4 3,051,861 + Psest_2861 0.32 -0.1 3,051,862 - Psest_2861 0.32 -0.3 3,051,862 - Psest_2861 0.32 -0.0 3,051,973 + Psest_2861 0.55 +1.4 3,051,973 + Psest_2861 0.55 -0.1 3,051,973 + Psest_2861 0.55 +1.3 3,051,973 + Psest_2861 0.55 -0.8 3,051,973 + Psest_2861 0.55 +0.7 3,051,974 - Psest_2861 0.55 -1.1 3,051,974 - Psest_2861 0.55 -0.7 3,051,974 - Psest_2861 0.55 +0.5 3,052,089 + Psest_2861 0.79 -0.6 3,052,090 - Psest_2861 0.79 -1.8 3,052,090 - Psest_2861 0.79 -1.1 3,052,090 - Psest_2861 0.79 +0.5 3,052,090 - Psest_2861 0.79 +0.6 3,052,108 + Psest_2861 0.83 -0.2 3,052,182 + -0.7 3,052,182 + +0.7 3,052,183 - -0.8 3,052,183 - -0.2 3,052,183 - +0.2 3,052,183 - +1.0 3,052,268 - +1.6 3,052,268 - +2.7 3,052,486 + Psest_2862 0.32 +3.3 3,052,486 + Psest_2862 0.32 +3.1 3,052,486 + Psest_2862 0.32 +1.4 3,052,486 + Psest_2862 0.32 +5.0 3,052,486 + Psest_2862 0.32 +3.6 3,052,486 + Psest_2862 0.32 +1.5 3,052,486 + Psest_2862 0.32 +4.0 3,052,486 + Psest_2862 0.32 +2.7 3,052,486 + Psest_2862 0.32 +4.2 3,052,486 + Psest_2862 0.32 +4.0 3,052,487 - Psest_2862 0.32 +1.9 3,052,487 - Psest_2862 0.32 +4.6 3,052,487 - Psest_2862 0.32 +1.4 3,052,487 - Psest_2862 0.32 +4.0 3,052,487 - Psest_2862 0.32 +3.0 3,052,487 - Psest_2862 0.32 +3.4 3,052,487 - Psest_2862 0.32 +4.4 3,052,487 - Psest_2862 0.32 +1.8 3,052,487 - Psest_2862 0.32 +3.5 3,052,487 - Psest_2862 0.32 +1.4 3,052,576 + Psest_2862 0.44 +3.8 3,052,618 + Psest_2862 0.49 +1.6 3,052,618 + Psest_2862 0.49 +1.4 3,052,619 - Psest_2862 0.49 -1.0 3,052,675 - Psest_2862 0.56 +1.2 3,052,675 - Psest_2862 0.56 +2.0 3,052,681 + Psest_2862 0.57 +3.5 3,052,681 + Psest_2862 0.57 +5.3 3,052,682 - Psest_2862 0.57 +3.4 3,052,682 - Psest_2862 0.57 +3.0 3,052,682 - Psest_2862 0.57 +6.1 3,052,826 - Psest_2862 0.76 +1.7 3,052,835 - Psest_2862 0.77 +1.5 3,052,835 - Psest_2862 0.77 +0.0 3,052,835 - Psest_2862 0.77 +3.2 3,052,850 + Psest_2862 0.79 +3.9 3,052,851 - Psest_2862 0.79 +4.4 3,052,855 + Psest_2862 0.80 +2.1 3,052,856 - Psest_2862 0.80 +0.0 3,053,049 + +0.5 3,053,065 - +1.7 3,053,065 - -1.2 3,053,121 + +3.3 3,053,435 + Psest_2863 0.33 +5.1 3,053,435 + Psest_2863 0.33 +2.7 3,053,435 + Psest_2863 0.33 +3.8 3,053,435 + Psest_2863 0.33 +1.8 3,053,436 - Psest_2863 0.33 -0.4 3,053,622 + Psest_2863 0.54 +2.5 3,053,795 - Psest_2863 0.72 +0.7 3,053,795 - Psest_2863 0.72 +0.9 3,053,930 + Psest_2863 0.87 +1.4 3,053,930 + Psest_2863 0.87 +1.8 3,053,930 + Psest_2863 0.87 +3.2 3,053,931 - Psest_2863 0.87 -2.1 3,053,931 - Psest_2863 0.87 +1.4 3,053,931 - Psest_2863 0.87 +2.2 3,053,931 - Psest_2863 0.87 +1.1 3,053,955 - Psest_2863 0.89 +3.7
Or see this region's nucleotide sequence