Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2742 and Psest_2743 are separated by 58 nucleotides Psest_2743 and Psest_2744 are separated by 160 nucleotides Psest_2744 and Psest_2745 are separated by 129 nucleotides Psest_2745 and Psest_2746 are separated by 22 nucleotides
Psest_2742: Psest_2742 - Predicted acetyltransferase, at 2,934,050 to 2,934,721
_2742
Psest_2743: Psest_2743 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 2,934,780 to 2,935,523
_2743
Psest_2744: Psest_2744 - Uncharacterized conserved protein, at 2,935,684 to 2,936,130
_2744
Psest_2745: Psest_2745 - Transcriptional regulator, at 2,936,260 to 2,936,943
_2745
Psest_2746: Psest_2746 - Protein of unknown function (DUF2855)., at 2,936,966 to 2,938,069
_2746
Position (kb)
2935
2936
2937 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2934.789 kb on + strand at 2934.801 kb on + strand at 2934.844 kb on + strand at 2934.874 kb on + strand, within Psest_2743 at 2934.875 kb on - strand, within Psest_2743 at 2935.198 kb on + strand, within Psest_2743 at 2935.199 kb on - strand, within Psest_2743 at 2935.199 kb on - strand, within Psest_2743 at 2935.199 kb on - strand, within Psest_2743 at 2935.334 kb on + strand, within Psest_2743 at 2935.483 kb on + strand at 2935.483 kb on + strand at 2935.483 kb on + strand at 2935.483 kb on + strand at 2935.484 kb on - strand at 2935.484 kb on - strand at 2935.484 kb on - strand at 2935.486 kb on + strand at 2935.504 kb on + strand at 2935.504 kb on + strand at 2935.504 kb on + strand at 2935.505 kb on - strand at 2935.565 kb on + strand at 2935.565 kb on + strand at 2935.566 kb on - strand at 2935.566 kb on - strand at 2935.566 kb on - strand at 2935.566 kb on - strand at 2935.566 kb on - strand at 2935.599 kb on + strand at 2935.600 kb on - strand at 2935.600 kb on - strand at 2936.076 kb on - strand, within Psest_2744 at 2936.076 kb on - strand, within Psest_2744 at 2936.174 kb on - strand at 2936.247 kb on + strand at 2936.289 kb on + strand at 2936.289 kb on + strand at 2936.290 kb on - strand at 2936.290 kb on - strand at 2936.480 kb on + strand, within Psest_2745 at 2936.678 kb on + strand, within Psest_2745 at 2936.678 kb on + strand, within Psest_2745 at 2936.711 kb on + strand, within Psest_2745 at 2936.711 kb on + strand, within Psest_2745 at 2936.711 kb on + strand, within Psest_2745 at 2936.711 kb on + strand, within Psest_2745 at 2936.712 kb on - strand, within Psest_2745 at 2936.712 kb on - strand, within Psest_2745 at 2936.712 kb on - strand, within Psest_2745 at 2936.712 kb on - strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.804 kb on + strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.805 kb on - strand, within Psest_2745 at 2936.824 kb on + strand, within Psest_2745 at 2936.825 kb on - strand, within Psest_2745 at 2936.945 kb on + strand at 2936.945 kb on + strand at 2936.946 kb on - strand at 2936.946 kb on - strand at 2936.946 kb on - strand at 2936.946 kb on - strand at 2937.071 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,934,789 + -0.7 2,934,801 + -0.1 2,934,844 + -0.4 2,934,874 + Psest_2743 0.13 -1.9 2,934,875 - Psest_2743 0.13 -0.4 2,935,198 + Psest_2743 0.56 -0.0 2,935,199 - Psest_2743 0.56 +0.6 2,935,199 - Psest_2743 0.56 +0.5 2,935,199 - Psest_2743 0.56 +1.3 2,935,334 + Psest_2743 0.74 -2.0 2,935,483 + +0.8 2,935,483 + -0.3 2,935,483 + -0.5 2,935,483 + +1.1 2,935,484 - -0.8 2,935,484 - +0.7 2,935,484 - +0.9 2,935,486 + -1.0 2,935,504 + +1.6 2,935,504 + -0.5 2,935,504 + +0.5 2,935,505 - -1.3 2,935,565 + +0.8 2,935,565 + +0.6 2,935,566 - +0.3 2,935,566 - +1.3 2,935,566 - -1.8 2,935,566 - -0.1 2,935,566 - +0.9 2,935,599 + +1.8 2,935,600 - -0.3 2,935,600 - -1.2 2,936,076 - Psest_2744 0.88 +2.7 2,936,076 - Psest_2744 0.88 +0.6 2,936,174 - -1.0 2,936,247 + +0.3 2,936,289 + -0.2 2,936,289 + +2.9 2,936,290 - -2.1 2,936,290 - +1.2 2,936,480 + Psest_2745 0.32 +0.0 2,936,678 + Psest_2745 0.61 -0.8 2,936,678 + Psest_2745 0.61 -2.6 2,936,711 + Psest_2745 0.66 +0.3 2,936,711 + Psest_2745 0.66 +0.2 2,936,711 + Psest_2745 0.66 -1.4 2,936,711 + Psest_2745 0.66 -1.2 2,936,712 - Psest_2745 0.66 +0.2 2,936,712 - Psest_2745 0.66 +2.2 2,936,712 - Psest_2745 0.66 -1.2 2,936,712 - Psest_2745 0.66 -0.8 2,936,804 + Psest_2745 0.80 -1.5 2,936,804 + Psest_2745 0.80 +1.5 2,936,804 + Psest_2745 0.80 -1.6 2,936,804 + Psest_2745 0.80 +0.3 2,936,804 + Psest_2745 0.80 +1.4 2,936,804 + Psest_2745 0.80 +0.4 2,936,804 + Psest_2745 0.80 +0.7 2,936,804 + Psest_2745 0.80 -1.2 2,936,804 + Psest_2745 0.80 +0.7 2,936,804 + Psest_2745 0.80 +1.4 2,936,804 + Psest_2745 0.80 -2.4 2,936,804 + Psest_2745 0.80 -0.1 2,936,804 + Psest_2745 0.80 -0.6 2,936,804 + Psest_2745 0.80 +0.2 2,936,804 + Psest_2745 0.80 -0.4 2,936,804 + Psest_2745 0.80 +1.6 2,936,805 - Psest_2745 0.80 -1.9 2,936,805 - Psest_2745 0.80 -0.1 2,936,805 - Psest_2745 0.80 -1.1 2,936,805 - Psest_2745 0.80 -0.7 2,936,805 - Psest_2745 0.80 +1.7 2,936,805 - Psest_2745 0.80 +0.3 2,936,805 - Psest_2745 0.80 +0.5 2,936,805 - Psest_2745 0.80 +0.3 2,936,805 - Psest_2745 0.80 +2.1 2,936,805 - Psest_2745 0.80 -1.1 2,936,805 - Psest_2745 0.80 -0.4 2,936,805 - Psest_2745 0.80 -0.7 2,936,805 - Psest_2745 0.80 -1.2 2,936,805 - Psest_2745 0.80 +0.0 2,936,805 - Psest_2745 0.80 -1.6 2,936,805 - Psest_2745 0.80 -2.2 2,936,805 - Psest_2745 0.80 -1.2 2,936,805 - Psest_2745 0.80 -3.7 2,936,824 + Psest_2745 0.82 -0.8 2,936,825 - Psest_2745 0.83 -0.8 2,936,945 + -2.0 2,936,945 + -0.5 2,936,946 - -0.9 2,936,946 - -0.4 2,936,946 - +0.9 2,936,946 - -0.5 2,937,071 - +0.4
Or see this region's nucleotide sequence