Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2717 and Psest_2718 are separated by 12 nucleotides Psest_2718 and Psest_2719 are separated by 55 nucleotides
Psest_2717: Psest_2717 - Succinylglutamate desuccinylase, at 2,906,382 to 2,907,380
_2717
Psest_2718: Psest_2718 - hypothetical protein, at 2,907,393 to 2,907,674
_2718
Psest_2719: Psest_2719 - acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family, at 2,907,730 to 2,908,950
_2719
Position (kb)
2907
2908 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2906.420 kb on + strand at 2906.421 kb on - strand at 2906.421 kb on - strand at 2906.938 kb on + strand, within Psest_2717 at 2906.939 kb on - strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.508 kb on + strand, within Psest_2718 at 2907.535 kb on - strand, within Psest_2718 at 2907.577 kb on - strand, within Psest_2718 at 2907.676 kb on + strand at 2907.676 kb on + strand at 2907.676 kb on + strand at 2907.677 kb on - strand at 2907.677 kb on - strand at 2907.965 kb on + strand, within Psest_2719 at 2908.230 kb on - strand, within Psest_2719 at 2908.329 kb on - strand, within Psest_2719 at 2908.482 kb on - strand, within Psest_2719 at 2908.572 kb on - strand, within Psest_2719
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,906,420 + +0.4 2,906,421 - +0.1 2,906,421 - +1.0 2,906,938 + Psest_2717 0.56 +0.1 2,906,939 - Psest_2717 0.56 +1.8 2,907,024 + Psest_2717 0.64 -0.3 2,907,024 + Psest_2717 0.64 -0.7 2,907,024 + Psest_2717 0.64 +1.3 2,907,025 - Psest_2717 0.64 -0.2 2,907,025 - Psest_2717 0.64 +1.9 2,907,025 - Psest_2717 0.64 +0.3 2,907,183 + Psest_2717 0.80 +1.0 2,907,183 + Psest_2717 0.80 +0.7 2,907,183 + Psest_2717 0.80 +0.8 2,907,183 + Psest_2717 0.80 +0.7 2,907,183 + Psest_2717 0.80 -0.3 2,907,183 + Psest_2717 0.80 -0.7 2,907,183 + Psest_2717 0.80 -0.4 2,907,183 + Psest_2717 0.80 +0.4 2,907,183 + Psest_2717 0.80 +0.6 2,907,184 - Psest_2717 0.80 +0.1 2,907,184 - Psest_2717 0.80 +2.1 2,907,184 - Psest_2717 0.80 -0.3 2,907,184 - Psest_2717 0.80 -1.7 2,907,184 - Psest_2717 0.80 -0.6 2,907,184 - Psest_2717 0.80 -1.5 2,907,184 - Psest_2717 0.80 -0.8 2,907,184 - Psest_2717 0.80 -2.0 2,907,508 + Psest_2718 0.41 -1.7 2,907,535 - Psest_2718 0.50 -1.5 2,907,577 - Psest_2718 0.65 -1.0 2,907,676 + -1.0 2,907,676 + -1.2 2,907,676 + -0.8 2,907,677 - +1.6 2,907,677 - -0.5 2,907,965 + Psest_2719 0.19 +2.3 2,908,230 - Psest_2719 0.41 +1.3 2,908,329 - Psest_2719 0.49 +1.3 2,908,482 - Psest_2719 0.62 -1.0 2,908,572 - Psest_2719 0.69 +0.3
Or see this region's nucleotide sequence