Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2530 and Psest_2531 are separated by 137 nucleotides Psest_2531 and Psest_2532 are separated by 12 nucleotides Psest_2532 and Psest_2533 are separated by 7 nucleotides
Psest_2530: Psest_2530 - cytochrome c oxidase, cbb3-type, subunit III, at 2,710,129 to 2,711,046
_2530
Psest_2531: Psest_2531 - cytochrome c oxidase accessory protein FixG, at 2,711,184 to 2,712,596
_2531
Psest_2532: Psest_2532 - Uncharacterized protein conserved in bacteria, at 2,712,609 to 2,713,109
_2532
Psest_2533: Psest_2533 - copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase, at 2,713,117 to 2,715,531
_2533
Position (kb)
2711
2712
2713 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2710.277 kb on - strand, within Psest_2530 at 2710.416 kb on - strand, within Psest_2530 at 2710.469 kb on - strand, within Psest_2530 at 2710.469 kb on - strand, within Psest_2530 at 2710.478 kb on - strand, within Psest_2530 at 2710.478 kb on - strand, within Psest_2530 at 2710.478 kb on - strand, within Psest_2530 at 2710.739 kb on - strand, within Psest_2530 at 2710.826 kb on + strand, within Psest_2530 at 2710.826 kb on + strand, within Psest_2530 at 2710.827 kb on - strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.893 kb on - strand, within Psest_2530 at 2710.893 kb on - strand, within Psest_2530 at 2710.893 kb on - strand, within Psest_2530 at 2710.900 kb on + strand, within Psest_2530 at 2711.011 kb on + strand at 2711.011 kb on + strand at 2711.011 kb on + strand at 2711.011 kb on + strand at 2711.102 kb on - strand at 2711.175 kb on - strand at 2711.212 kb on + strand at 2711.529 kb on + strand, within Psest_2531 at 2711.812 kb on - strand, within Psest_2531 at 2711.850 kb on + strand, within Psest_2531 at 2711.850 kb on + strand, within Psest_2531 at 2711.850 kb on + strand, within Psest_2531 at 2711.850 kb on + strand, within Psest_2531 at 2711.850 kb on + strand, within Psest_2531 at 2711.850 kb on + strand, within Psest_2531 at 2711.850 kb on + strand, within Psest_2531 at 2711.850 kb on + strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.851 kb on - strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.852 kb on + strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.853 kb on - strand, within Psest_2531 at 2711.913 kb on + strand, within Psest_2531 at 2711.914 kb on - strand, within Psest_2531 at 2711.964 kb on + strand, within Psest_2531 at 2711.965 kb on - strand, within Psest_2531 at 2712.138 kb on + strand, within Psest_2531 at 2712.138 kb on + strand, within Psest_2531 at 2712.139 kb on - strand, within Psest_2531 at 2712.139 kb on - strand, within Psest_2531 at 2712.139 kb on - strand, within Psest_2531 at 2712.139 kb on - strand, within Psest_2531 at 2712.201 kb on + strand, within Psest_2531 at 2712.249 kb on + strand, within Psest_2531 at 2712.250 kb on - strand, within Psest_2531 at 2712.250 kb on - strand, within Psest_2531 at 2712.333 kb on + strand, within Psest_2531 at 2712.334 kb on - strand, within Psest_2531 at 2712.334 kb on - strand, within Psest_2531 at 2712.411 kb on + strand, within Psest_2531 at 2712.431 kb on - strand, within Psest_2531 at 2712.493 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.606 kb on + strand at 2712.753 kb on + strand, within Psest_2532 at 2712.753 kb on + strand, within Psest_2532 at 2712.753 kb on + strand, within Psest_2532 at 2712.753 kb on + strand, within Psest_2532 at 2712.753 kb on + strand, within Psest_2532 at 2712.753 kb on + strand, within Psest_2532 at 2712.756 kb on + strand, within Psest_2532 at 2712.756 kb on + strand, within Psest_2532 at 2712.975 kb on + strand, within Psest_2532
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,710,277 - Psest_2530 0.16 +3.6 2,710,416 - Psest_2530 0.31 -1.7 2,710,469 - Psest_2530 0.37 +0.2 2,710,469 - Psest_2530 0.37 +2.3 2,710,478 - Psest_2530 0.38 +1.6 2,710,478 - Psest_2530 0.38 -2.4 2,710,478 - Psest_2530 0.38 +1.1 2,710,739 - Psest_2530 0.66 +0.9 2,710,826 + Psest_2530 0.76 -0.3 2,710,826 + Psest_2530 0.76 +0.6 2,710,827 - Psest_2530 0.76 +0.5 2,710,892 + Psest_2530 0.83 +2.3 2,710,892 + Psest_2530 0.83 +2.5 2,710,892 + Psest_2530 0.83 +2.3 2,710,892 + Psest_2530 0.83 +0.6 2,710,892 + Psest_2530 0.83 +2.1 2,710,892 + Psest_2530 0.83 +1.3 2,710,892 + Psest_2530 0.83 +5.6 2,710,892 + Psest_2530 0.83 +1.3 2,710,892 + Psest_2530 0.83 +1.3 2,710,893 - Psest_2530 0.83 +1.5 2,710,893 - Psest_2530 0.83 +2.0 2,710,893 - Psest_2530 0.83 +2.9 2,710,900 + Psest_2530 0.84 +1.7 2,711,011 + -0.8 2,711,011 + +0.3 2,711,011 + -0.8 2,711,011 + +1.3 2,711,102 - +0.6 2,711,175 - +1.7 2,711,212 + +1.0 2,711,529 + Psest_2531 0.24 +1.2 2,711,812 - Psest_2531 0.44 +3.6 2,711,850 + Psest_2531 0.47 +0.2 2,711,850 + Psest_2531 0.47 +1.2 2,711,850 + Psest_2531 0.47 +1.8 2,711,850 + Psest_2531 0.47 +0.5 2,711,850 + Psest_2531 0.47 +0.5 2,711,850 + Psest_2531 0.47 +1.5 2,711,850 + Psest_2531 0.47 +1.4 2,711,850 + Psest_2531 0.47 +1.2 2,711,851 - Psest_2531 0.47 +0.3 2,711,851 - Psest_2531 0.47 +2.8 2,711,851 - Psest_2531 0.47 +0.8 2,711,851 - Psest_2531 0.47 +0.6 2,711,851 - Psest_2531 0.47 +2.2 2,711,851 - Psest_2531 0.47 +2.1 2,711,851 - Psest_2531 0.47 +1.6 2,711,851 - Psest_2531 0.47 +3.6 2,711,851 - Psest_2531 0.47 +2.7 2,711,851 - Psest_2531 0.47 +2.9 2,711,851 - Psest_2531 0.47 +1.9 2,711,851 - Psest_2531 0.47 +4.9 2,711,851 - Psest_2531 0.47 +3.7 2,711,851 - Psest_2531 0.47 +3.5 2,711,851 - Psest_2531 0.47 +3.7 2,711,851 - Psest_2531 0.47 +3.1 2,711,851 - Psest_2531 0.47 +1.7 2,711,851 - Psest_2531 0.47 +4.6 2,711,851 - Psest_2531 0.47 +1.3 2,711,851 - Psest_2531 0.47 -0.2 2,711,851 - Psest_2531 0.47 +2.1 2,711,851 - Psest_2531 0.47 +2.6 2,711,851 - Psest_2531 0.47 +2.0 2,711,851 - Psest_2531 0.47 +0.3 2,711,851 - Psest_2531 0.47 +2.7 2,711,852 + Psest_2531 0.47 +0.1 2,711,852 + Psest_2531 0.47 +0.3 2,711,852 + Psest_2531 0.47 +0.5 2,711,852 + Psest_2531 0.47 -0.2 2,711,852 + Psest_2531 0.47 +1.0 2,711,852 + Psest_2531 0.47 +0.4 2,711,852 + Psest_2531 0.47 +1.2 2,711,852 + Psest_2531 0.47 +1.8 2,711,852 + Psest_2531 0.47 +0.9 2,711,852 + Psest_2531 0.47 +1.9 2,711,852 + Psest_2531 0.47 +0.4 2,711,852 + Psest_2531 0.47 +0.3 2,711,852 + Psest_2531 0.47 -0.4 2,711,852 + Psest_2531 0.47 -0.3 2,711,852 + Psest_2531 0.47 +0.3 2,711,852 + Psest_2531 0.47 -0.5 2,711,852 + Psest_2531 0.47 +0.5 2,711,853 - Psest_2531 0.47 +2.1 2,711,853 - Psest_2531 0.47 +3.6 2,711,853 - Psest_2531 0.47 -0.3 2,711,853 - Psest_2531 0.47 +2.6 2,711,853 - Psest_2531 0.47 +3.0 2,711,853 - Psest_2531 0.47 +1.0 2,711,853 - Psest_2531 0.47 +2.4 2,711,853 - Psest_2531 0.47 +4.5 2,711,853 - Psest_2531 0.47 +0.3 2,711,853 - Psest_2531 0.47 +1.6 2,711,853 - Psest_2531 0.47 +2.2 2,711,853 - Psest_2531 0.47 +2.5 2,711,853 - Psest_2531 0.47 +1.3 2,711,853 - Psest_2531 0.47 +3.9 2,711,853 - Psest_2531 0.47 +2.2 2,711,853 - Psest_2531 0.47 +0.5 2,711,853 - Psest_2531 0.47 +1.1 2,711,853 - Psest_2531 0.47 +0.5 2,711,853 - Psest_2531 0.47 +2.3 2,711,913 + Psest_2531 0.52 +0.8 2,711,914 - Psest_2531 0.52 -0.7 2,711,964 + Psest_2531 0.55 +3.0 2,711,965 - Psest_2531 0.55 +2.5 2,712,138 + Psest_2531 0.68 -0.1 2,712,138 + Psest_2531 0.68 +2.6 2,712,139 - Psest_2531 0.68 +4.4 2,712,139 - Psest_2531 0.68 +1.5 2,712,139 - Psest_2531 0.68 +0.7 2,712,139 - Psest_2531 0.68 +3.8 2,712,201 + Psest_2531 0.72 +0.6 2,712,249 + Psest_2531 0.75 +0.9 2,712,250 - Psest_2531 0.75 +5.1 2,712,250 - Psest_2531 0.75 +0.5 2,712,333 + Psest_2531 0.81 +2.3 2,712,334 - Psest_2531 0.81 +3.9 2,712,334 - Psest_2531 0.81 +1.0 2,712,411 + Psest_2531 0.87 +1.1 2,712,431 - Psest_2531 0.88 +1.3 2,712,493 + -0.0 2,712,606 + -0.5 2,712,606 + +0.8 2,712,606 + +0.0 2,712,606 + +1.7 2,712,606 + +1.6 2,712,606 + +1.1 2,712,606 + +1.9 2,712,606 + +2.5 2,712,606 + +0.4 2,712,606 + +0.9 2,712,606 + -0.2 2,712,606 + -0.2 2,712,753 + Psest_2532 0.29 -0.3 2,712,753 + Psest_2532 0.29 +3.9 2,712,753 + Psest_2532 0.29 +2.3 2,712,753 + Psest_2532 0.29 +1.6 2,712,753 + Psest_2532 0.29 +1.3 2,712,753 + Psest_2532 0.29 +3.9 2,712,756 + Psest_2532 0.29 +1.0 2,712,756 + Psest_2532 0.29 +2.0 2,712,975 + Psest_2532 0.73 +0.8
Or see this region's nucleotide sequence