Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2484 and Psest_2485 are separated by 121 nucleotides Psest_2485 and Psest_2486 are separated by 69 nucleotides Psest_2486 and Psest_2487 overlap by 4 nucleotides
Psest_2484: Psest_2484 - Molecular chaperone, HSP90 family, at 2,656,354 to 2,658,258
_2484
Psest_2485: Psest_2485 - hypothetical protein, at 2,658,380 to 2,659,618
_2485
Psest_2486: Psest_2486 - Uncharacterized protein, possibly involved in aromatic compounds catabolism, at 2,659,688 to 2,660,131
_2486
Psest_2487: Psest_2487 - uncharacterized domain 1, at 2,660,128 to 2,660,589
_2487
Position (kb)
2658
2659
2660 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2657.405 kb on + strand, within Psest_2484 at 2657.405 kb on + strand, within Psest_2484 at 2657.405 kb on + strand, within Psest_2484 at 2657.405 kb on + strand, within Psest_2484 at 2657.405 kb on + strand, within Psest_2484 at 2657.406 kb on - strand, within Psest_2484 at 2657.406 kb on - strand, within Psest_2484 at 2657.406 kb on - strand, within Psest_2484 at 2657.406 kb on - strand, within Psest_2484 at 2657.406 kb on - strand, within Psest_2484 at 2657.406 kb on - strand, within Psest_2484 at 2657.420 kb on + strand, within Psest_2484 at 2657.420 kb on + strand, within Psest_2484 at 2657.420 kb on + strand, within Psest_2484 at 2657.492 kb on + strand, within Psest_2484 at 2657.492 kb on + strand, within Psest_2484 at 2657.492 kb on + strand, within Psest_2484 at 2657.492 kb on + strand, within Psest_2484 at 2657.493 kb on - strand, within Psest_2484 at 2657.493 kb on - strand, within Psest_2484 at 2657.493 kb on - strand, within Psest_2484 at 2657.651 kb on + strand, within Psest_2484 at 2657.651 kb on + strand, within Psest_2484 at 2657.652 kb on - strand, within Psest_2484 at 2657.652 kb on - strand, within Psest_2484 at 2657.652 kb on - strand, within Psest_2484 at 2657.724 kb on + strand, within Psest_2484 at 2657.730 kb on + strand, within Psest_2484 at 2657.831 kb on + strand, within Psest_2484 at 2657.831 kb on + strand, within Psest_2484 at 2657.832 kb on - strand, within Psest_2484 at 2657.832 kb on - strand, within Psest_2484 at 2657.832 kb on - strand, within Psest_2484 at 2657.867 kb on + strand, within Psest_2484 at 2657.868 kb on - strand, within Psest_2484 at 2657.868 kb on - strand, within Psest_2484 at 2657.868 kb on - strand, within Psest_2484 at 2658.155 kb on - strand at 2658.176 kb on + strand at 2658.263 kb on + strand at 2658.263 kb on + strand at 2658.429 kb on + strand at 2658.429 kb on + strand at 2658.429 kb on + strand at 2658.429 kb on + strand at 2658.429 kb on + strand at 2658.429 kb on + strand at 2658.429 kb on + strand at 2658.429 kb on + strand at 2658.429 kb on + strand at 2658.430 kb on - strand at 2658.430 kb on - strand at 2658.556 kb on - strand, within Psest_2485 at 2658.635 kb on + strand, within Psest_2485 at 2658.636 kb on - strand, within Psest_2485 at 2658.636 kb on - strand, within Psest_2485 at 2658.711 kb on - strand, within Psest_2485 at 2658.870 kb on + strand, within Psest_2485 at 2658.954 kb on + strand, within Psest_2485 at 2658.954 kb on + strand, within Psest_2485 at 2658.954 kb on + strand, within Psest_2485 at 2658.955 kb on - strand, within Psest_2485 at 2659.169 kb on - strand, within Psest_2485 at 2659.226 kb on + strand, within Psest_2485 at 2659.253 kb on + strand, within Psest_2485 at 2659.253 kb on + strand, within Psest_2485 at 2659.254 kb on - strand, within Psest_2485 at 2659.601 kb on + strand at 2659.602 kb on - strand at 2659.602 kb on - strand at 2659.602 kb on - strand at 2659.602 kb on - strand at 2659.602 kb on - strand at 2659.602 kb on - strand at 2659.608 kb on - strand at 2659.608 kb on - strand at 2659.608 kb on - strand at 2659.766 kb on + strand, within Psest_2486 at 2659.842 kb on + strand, within Psest_2486 at 2659.842 kb on + strand, within Psest_2486 at 2659.842 kb on + strand, within Psest_2486 at 2659.842 kb on + strand, within Psest_2486 at 2659.843 kb on - strand, within Psest_2486 at 2659.843 kb on - strand, within Psest_2486 at 2660.076 kb on + strand, within Psest_2486 at 2660.152 kb on + strand at 2660.152 kb on + strand at 2660.153 kb on - strand at 2660.194 kb on + strand, within Psest_2487 at 2660.195 kb on - strand, within Psest_2487 at 2660.195 kb on - strand, within Psest_2487 at 2660.195 kb on - strand, within Psest_2487 at 2660.195 kb on - strand, within Psest_2487 at 2660.195 kb on - strand, within Psest_2487 at 2660.263 kb on - strand, within Psest_2487 at 2660.271 kb on - strand, within Psest_2487 at 2660.321 kb on + strand, within Psest_2487 at 2660.321 kb on + strand, within Psest_2487 at 2660.322 kb on - strand, within Psest_2487 at 2660.322 kb on - strand, within Psest_2487 at 2660.322 kb on - strand, within Psest_2487 at 2660.515 kb on + strand, within Psest_2487 at 2660.515 kb on + strand, within Psest_2487 at 2660.515 kb on + strand, within Psest_2487 at 2660.516 kb on - strand, within Psest_2487 at 2660.516 kb on - strand, within Psest_2487
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,657,405 + Psest_2484 0.55 -0.3 2,657,405 + Psest_2484 0.55 +0.2 2,657,405 + Psest_2484 0.55 -0.9 2,657,405 + Psest_2484 0.55 +0.3 2,657,405 + Psest_2484 0.55 +0.8 2,657,406 - Psest_2484 0.55 -2.5 2,657,406 - Psest_2484 0.55 +0.2 2,657,406 - Psest_2484 0.55 +0.7 2,657,406 - Psest_2484 0.55 +2.1 2,657,406 - Psest_2484 0.55 +1.2 2,657,406 - Psest_2484 0.55 -0.5 2,657,420 + Psest_2484 0.56 +0.2 2,657,420 + Psest_2484 0.56 -0.2 2,657,420 + Psest_2484 0.56 +0.7 2,657,492 + Psest_2484 0.60 +0.3 2,657,492 + Psest_2484 0.60 +1.1 2,657,492 + Psest_2484 0.60 +1.3 2,657,492 + Psest_2484 0.60 +1.0 2,657,493 - Psest_2484 0.60 -1.1 2,657,493 - Psest_2484 0.60 -0.3 2,657,493 - Psest_2484 0.60 +2.6 2,657,651 + Psest_2484 0.68 +0.7 2,657,651 + Psest_2484 0.68 +3.4 2,657,652 - Psest_2484 0.68 +0.3 2,657,652 - Psest_2484 0.68 +1.7 2,657,652 - Psest_2484 0.68 +0.4 2,657,724 + Psest_2484 0.72 +0.1 2,657,730 + Psest_2484 0.72 +1.3 2,657,831 + Psest_2484 0.78 +0.8 2,657,831 + Psest_2484 0.78 +1.5 2,657,832 - Psest_2484 0.78 +2.2 2,657,832 - Psest_2484 0.78 -0.8 2,657,832 - Psest_2484 0.78 +0.2 2,657,867 + Psest_2484 0.79 +0.9 2,657,868 - Psest_2484 0.79 +1.2 2,657,868 - Psest_2484 0.79 -0.7 2,657,868 - Psest_2484 0.79 +1.8 2,658,155 - +0.7 2,658,176 + -1.0 2,658,263 + +0.8 2,658,263 + -2.0 2,658,429 + -0.3 2,658,429 + -0.7 2,658,429 + -1.3 2,658,429 + +1.0 2,658,429 + +0.8 2,658,429 + +0.4 2,658,429 + -0.6 2,658,429 + -1.0 2,658,429 + -1.2 2,658,430 - -0.2 2,658,430 - +0.6 2,658,556 - Psest_2485 0.14 -0.3 2,658,635 + Psest_2485 0.21 +1.1 2,658,636 - Psest_2485 0.21 -2.3 2,658,636 - Psest_2485 0.21 -0.8 2,658,711 - Psest_2485 0.27 -2.6 2,658,870 + Psest_2485 0.40 +3.2 2,658,954 + Psest_2485 0.46 -0.5 2,658,954 + Psest_2485 0.46 +0.6 2,658,954 + Psest_2485 0.46 +0.3 2,658,955 - Psest_2485 0.46 +0.2 2,659,169 - Psest_2485 0.64 +0.4 2,659,226 + Psest_2485 0.68 +0.7 2,659,253 + Psest_2485 0.70 -1.1 2,659,253 + Psest_2485 0.70 +0.0 2,659,254 - Psest_2485 0.71 -1.1 2,659,601 + -1.0 2,659,602 - +0.3 2,659,602 - +0.9 2,659,602 - +0.5 2,659,602 - -1.3 2,659,602 - -0.7 2,659,602 - +0.5 2,659,608 - +0.4 2,659,608 - +0.4 2,659,608 - -0.4 2,659,766 + Psest_2486 0.18 -1.4 2,659,842 + Psest_2486 0.35 +0.5 2,659,842 + Psest_2486 0.35 +0.9 2,659,842 + Psest_2486 0.35 -2.4 2,659,842 + Psest_2486 0.35 -2.4 2,659,843 - Psest_2486 0.35 +1.0 2,659,843 - Psest_2486 0.35 +0.8 2,660,076 + Psest_2486 0.87 -1.2 2,660,152 + +0.1 2,660,152 + +1.2 2,660,153 - +1.0 2,660,194 + Psest_2487 0.14 +1.3 2,660,195 - Psest_2487 0.15 -0.1 2,660,195 - Psest_2487 0.15 +0.3 2,660,195 - Psest_2487 0.15 +0.6 2,660,195 - Psest_2487 0.15 -2.8 2,660,195 - Psest_2487 0.15 +0.5 2,660,263 - Psest_2487 0.29 +0.1 2,660,271 - Psest_2487 0.31 -0.8 2,660,321 + Psest_2487 0.42 +0.5 2,660,321 + Psest_2487 0.42 +0.2 2,660,322 - Psest_2487 0.42 -0.1 2,660,322 - Psest_2487 0.42 -2.3 2,660,322 - Psest_2487 0.42 +0.4 2,660,515 + Psest_2487 0.84 +0.5 2,660,515 + Psest_2487 0.84 -0.9 2,660,515 + Psest_2487 0.84 -0.9 2,660,516 - Psest_2487 0.84 +0.9 2,660,516 - Psest_2487 0.84 +0.5
Or see this region's nucleotide sequence