Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1837

Experiment: Bacitracin 0.25 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_1836 and Psest_1837 are separated by 19 nucleotidesPsest_1837 and Psest_1838 are separated by 131 nucleotides Psest_1836: Psest_1836 - Uncharacterized conserved protein, at 1,938,112 to 1,939,299 _1836 Psest_1837: Psest_1837 - Endoglucanase, at 1,939,319 to 1,940,398 _1837 Psest_1838: Psest_1838 - capsular exopolysaccharide family, at 1,940,530 to 1,942,746 _1838 Position (kb) 1939 1940 1941Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1939.438 kb on - strand, within Psest_1837at 1939.438 kb on - strand, within Psest_1837at 1939.498 kb on - strand, within Psest_1837at 1939.620 kb on - strand, within Psest_1837at 1939.663 kb on - strand, within Psest_1837at 1939.663 kb on - strand, within Psest_1837at 1939.663 kb on - strand, within Psest_1837at 1939.663 kb on - strand, within Psest_1837at 1939.663 kb on - strand, within Psest_1837at 1939.663 kb on - strand, within Psest_1837at 1939.663 kb on - strand, within Psest_1837at 1939.705 kb on - strand, within Psest_1837at 1939.957 kb on - strand, within Psest_1837at 1939.957 kb on - strand, within Psest_1837at 1939.957 kb on - strand, within Psest_1837at 1939.957 kb on - strand, within Psest_1837at 1939.966 kb on - strand, within Psest_1837at 1940.011 kb on - strand, within Psest_1837at 1940.011 kb on - strand, within Psest_1837at 1940.011 kb on - strand, within Psest_1837at 1940.011 kb on - strand, within Psest_1837at 1940.011 kb on - strand, within Psest_1837at 1940.011 kb on - strand, within Psest_1837at 1940.011 kb on - strand, within Psest_1837at 1940.175 kb on + strand, within Psest_1837at 1940.176 kb on - strand, within Psest_1837at 1940.176 kb on - strand, within Psest_1837at 1940.206 kb on - strand, within Psest_1837at 1940.206 kb on - strand, within Psest_1837at 1940.206 kb on - strand, within Psest_1837at 1940.410 kb on - strandat 1940.410 kb on - strandat 1940.453 kb on + strandat 1940.454 kb on - strandat 1940.454 kb on - strandat 1940.456 kb on + strandat 1940.457 kb on - strandat 1940.562 kb on - strandat 1940.562 kb on - strandat 1940.562 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml
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1,939,438 - Psest_1837 0.11 -1.7
1,939,438 - Psest_1837 0.11 -2.4
1,939,498 - Psest_1837 0.17 -1.6
1,939,620 - Psest_1837 0.28 -1.5
1,939,663 - Psest_1837 0.32 -3.2
1,939,663 - Psest_1837 0.32 -1.4
1,939,663 - Psest_1837 0.32 -2.9
1,939,663 - Psest_1837 0.32 -3.5
1,939,663 - Psest_1837 0.32 -2.4
1,939,663 - Psest_1837 0.32 -1.4
1,939,663 - Psest_1837 0.32 -2.4
1,939,705 - Psest_1837 0.36 -4.2
1,939,957 - Psest_1837 0.59 -1.2
1,939,957 - Psest_1837 0.59 -4.4
1,939,957 - Psest_1837 0.59 -4.0
1,939,957 - Psest_1837 0.59 -2.7
1,939,966 - Psest_1837 0.60 -3.6
1,940,011 - Psest_1837 0.64 -1.6
1,940,011 - Psest_1837 0.64 -1.4
1,940,011 - Psest_1837 0.64 -3.4
1,940,011 - Psest_1837 0.64 -4.4
1,940,011 - Psest_1837 0.64 -3.3
1,940,011 - Psest_1837 0.64 -4.7
1,940,011 - Psest_1837 0.64 -2.1
1,940,175 + Psest_1837 0.79 -1.1
1,940,176 - Psest_1837 0.79 -4.0
1,940,176 - Psest_1837 0.79 -3.6
1,940,206 - Psest_1837 0.82 -3.3
1,940,206 - Psest_1837 0.82 -2.7
1,940,206 - Psest_1837 0.82 -1.4
1,940,410 - +0.2
1,940,410 - -2.2
1,940,453 + -2.9
1,940,454 - -1.0
1,940,454 - +1.8
1,940,456 + -2.4
1,940,457 - +0.5
1,940,562 - -1.6
1,940,562 - -2.2
1,940,562 - -1.9

Or see this region's nucleotide sequence