Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1720 and Psest_1721 are separated by 19 nucleotides Psest_1721 and Psest_1722 overlap by 11 nucleotides
Psest_1720: Psest_1720 - flagellar motor switch protein FliG, at 1,826,830 to 1,827,846
_1720
Psest_1721: Psest_1721 - Flagellar biosynthesis/type III secretory pathway protein, at 1,827,866 to 1,828,642
_1721
Psest_1722: Psest_1722 - flagellar protein export ATPase FliI, at 1,828,632 to 1,829,990
_1722
Position (kb)
1827
1828
1829 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 1827.073 kb on + strand, within Psest_1720 at 1827.073 kb on + strand, within Psest_1720 at 1827.073 kb on + strand, within Psest_1720 at 1827.073 kb on + strand, within Psest_1720 at 1827.074 kb on - strand, within Psest_1720 at 1827.136 kb on - strand, within Psest_1720 at 1827.153 kb on + strand, within Psest_1720 at 1827.251 kb on - strand, within Psest_1720 at 1827.425 kb on + strand, within Psest_1720 at 1827.425 kb on + strand, within Psest_1720 at 1827.425 kb on + strand, within Psest_1720 at 1827.426 kb on - strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.815 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.844 kb on + strand at 1827.845 kb on - strand at 1827.845 kb on - strand at 1827.852 kb on + strand at 1827.861 kb on + strand at 1828.088 kb on + strand, within Psest_1721 at 1828.088 kb on + strand, within Psest_1721 at 1828.089 kb on - strand, within Psest_1721 at 1828.089 kb on - strand, within Psest_1721 at 1828.140 kb on + strand, within Psest_1721 at 1828.674 kb on + strand at 1828.675 kb on - strand at 1828.809 kb on + strand, within Psest_1722 at 1828.809 kb on + strand, within Psest_1722 at 1828.809 kb on + strand, within Psest_1722 at 1828.809 kb on + strand, within Psest_1722 at 1828.810 kb on - strand, within Psest_1722 at 1828.863 kb on + strand, within Psest_1722 at 1828.863 kb on + strand, within Psest_1722 at 1828.863 kb on + strand, within Psest_1722 at 1829.364 kb on + strand, within Psest_1722 at 1829.364 kb on + strand, within Psest_1722 at 1829.364 kb on + strand, within Psest_1722 at 1829.385 kb on + strand, within Psest_1722 at 1829.586 kb on + strand, within Psest_1722 at 1829.586 kb on + strand, within Psest_1722 at 1829.586 kb on + strand, within Psest_1722 at 1829.586 kb on + strand, within Psest_1722 at 1829.586 kb on + strand, within Psest_1722 at 1829.586 kb on + strand, within Psest_1722 at 1829.586 kb on + strand, within Psest_1722 at 1829.586 kb on + strand, within Psest_1722 at 1829.587 kb on - strand, within Psest_1722 at 1829.587 kb on - strand, within Psest_1722 at 1829.588 kb on + strand, within Psest_1722 at 1829.593 kb on + strand, within Psest_1722 at 1829.593 kb on + strand, within Psest_1722 at 1829.593 kb on + strand, within Psest_1722 at 1829.593 kb on + strand, within Psest_1722
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,827,073 + Psest_1720 0.24 +2.8 1,827,073 + Psest_1720 0.24 +4.7 1,827,073 + Psest_1720 0.24 +5.6 1,827,073 + Psest_1720 0.24 +2.9 1,827,074 - Psest_1720 0.24 +1.8 1,827,136 - Psest_1720 0.30 +1.1 1,827,153 + Psest_1720 0.32 +2.9 1,827,251 - Psest_1720 0.41 +3.0 1,827,425 + Psest_1720 0.59 +3.3 1,827,425 + Psest_1720 0.59 +0.3 1,827,425 + Psest_1720 0.59 +5.8 1,827,426 - Psest_1720 0.59 +4.3 1,827,460 + Psest_1720 0.62 +3.9 1,827,460 + Psest_1720 0.62 +2.5 1,827,460 + Psest_1720 0.62 +2.7 1,827,460 + Psest_1720 0.62 +3.4 1,827,460 + Psest_1720 0.62 +2.8 1,827,460 + Psest_1720 0.62 +1.9 1,827,543 + Psest_1720 0.70 +1.5 1,827,543 + Psest_1720 0.70 +4.0 1,827,543 + Psest_1720 0.70 +2.5 1,827,543 + Psest_1720 0.70 +4.2 1,827,543 + Psest_1720 0.70 +2.5 1,827,543 + Psest_1720 0.70 +3.5 1,827,543 + Psest_1720 0.70 +4.4 1,827,543 + Psest_1720 0.70 +3.2 1,827,544 - Psest_1720 0.70 +3.4 1,827,544 - Psest_1720 0.70 +3.3 1,827,544 - Psest_1720 0.70 +4.0 1,827,544 - Psest_1720 0.70 +4.2 1,827,544 - Psest_1720 0.70 +2.6 1,827,544 - Psest_1720 0.70 -2.0 1,827,544 - Psest_1720 0.70 +3.6 1,827,544 - Psest_1720 0.70 +2.7 1,827,544 - Psest_1720 0.70 +2.7 1,827,544 - Psest_1720 0.70 +2.6 1,827,544 - Psest_1720 0.70 +4.5 1,827,544 - Psest_1720 0.70 +1.4 1,827,544 - Psest_1720 0.70 +1.7 1,827,544 - Psest_1720 0.70 +2.9 1,827,815 + +1.4 1,827,844 + +1.8 1,827,844 + -0.3 1,827,844 + -0.5 1,827,844 + +0.7 1,827,844 + -1.4 1,827,844 + -0.5 1,827,844 + -0.4 1,827,844 + +2.1 1,827,844 + +0.6 1,827,844 + -1.9 1,827,845 - +5.4 1,827,845 - +3.2 1,827,852 + +1.3 1,827,861 + +2.1 1,828,088 + Psest_1721 0.29 +3.9 1,828,088 + Psest_1721 0.29 +2.0 1,828,089 - Psest_1721 0.29 +2.8 1,828,089 - Psest_1721 0.29 +4.1 1,828,140 + Psest_1721 0.35 +4.6 1,828,674 + +6.0 1,828,675 - +1.9 1,828,809 + Psest_1722 0.13 +3.6 1,828,809 + Psest_1722 0.13 +3.3 1,828,809 + Psest_1722 0.13 +4.1 1,828,809 + Psest_1722 0.13 +2.8 1,828,810 - Psest_1722 0.13 +4.2 1,828,863 + Psest_1722 0.17 +3.7 1,828,863 + Psest_1722 0.17 +4.0 1,828,863 + Psest_1722 0.17 +3.2 1,829,364 + Psest_1722 0.54 +3.3 1,829,364 + Psest_1722 0.54 +2.2 1,829,364 + Psest_1722 0.54 +3.8 1,829,385 + Psest_1722 0.55 +3.2 1,829,586 + Psest_1722 0.70 +2.5 1,829,586 + Psest_1722 0.70 +4.4 1,829,586 + Psest_1722 0.70 +3.1 1,829,586 + Psest_1722 0.70 +3.4 1,829,586 + Psest_1722 0.70 +2.2 1,829,586 + Psest_1722 0.70 +1.8 1,829,586 + Psest_1722 0.70 +2.0 1,829,586 + Psest_1722 0.70 +3.3 1,829,587 - Psest_1722 0.70 +3.3 1,829,587 - Psest_1722 0.70 +3.9 1,829,588 + Psest_1722 0.70 +3.0 1,829,593 + Psest_1722 0.71 +4.5 1,829,593 + Psest_1722 0.71 +2.9 1,829,593 + Psest_1722 0.71 +1.7 1,829,593 + Psest_1722 0.71 +4.4
Or see this region's nucleotide sequence