Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1688 and Psest_1689 are separated by 192 nucleotides Psest_1689 and Psest_1690 are separated by 172 nucleotides Psest_1690 and Psest_1691 overlap by 4 nucleotides Psest_1691 and Psest_1692 overlap by 4 nucleotides
Psest_1688: Psest_1688 - 3-oxoacyl-(acyl-carrier-protein) reductase, at 1,796,337 to 1,797,080
_1688
Psest_1689: Psest_1689 - acyl carrier protein, at 1,797,273 to 1,797,509
_1689
Psest_1690: Psest_1690 - beta-ketoacyl-acyl-carrier-protein synthase II, at 1,797,682 to 1,798,926
_1690
Psest_1691: Psest_1691 - aminodeoxychorismate lyase, at 1,798,923 to 1,799,744
_1691
Psest_1692: Psest_1692 - conserved hypothetical protein, YceG family, at 1,799,741 to 1,800,811
_1692
Position (kb)
1797
1798
1799 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.126 kb on + strand at 1797.126 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.132 kb on + strand at 1797.132 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.507 kb on + strand at 1797.514 kb on + strand at 1797.662 kb on + strand at 1797.666 kb on + strand at 1797.666 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1798.955 kb on + strand at 1798.957 kb on + strand at 1799.027 kb on + strand, within Psest_1691 at 1799.028 kb on - strand, within Psest_1691 at 1799.423 kb on + strand, within Psest_1691 at 1799.423 kb on + strand, within Psest_1691 at 1799.640 kb on + strand, within Psest_1691 at 1799.640 kb on + strand, within Psest_1691
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,797,069 + -1.5 1,797,069 + -1.5 1,797,069 + +1.0 1,797,069 + -0.3 1,797,069 + -2.5 1,797,069 + -1.5 1,797,069 + +1.3 1,797,069 + -0.7 1,797,069 + -1.0 1,797,069 + -1.7 1,797,069 + +1.3 1,797,069 + -0.0 1,797,069 + -1.3 1,797,126 + +0.2 1,797,126 + -0.3 1,797,130 + -1.1 1,797,130 + +1.3 1,797,130 + -0.7 1,797,130 + +0.5 1,797,132 + -0.3 1,797,132 + -2.5 1,797,217 + +1.3 1,797,217 + +1.9 1,797,217 + -0.9 1,797,217 + +5.0 1,797,217 + -1.0 1,797,219 + +4.1 1,797,219 + -0.5 1,797,219 + +0.1 1,797,219 + -0.3 1,797,219 + +0.7 1,797,507 + -0.7 1,797,514 + -0.7 1,797,662 + +3.1 1,797,666 + +2.5 1,797,666 + -0.4 1,797,668 + -2.5 1,797,668 + +1.0 1,797,668 + +2.3 1,797,668 + +3.5 1,797,668 + +2.9 1,798,955 + +1.4 1,798,957 + +2.7 1,799,027 + Psest_1691 0.13 -1.0 1,799,028 - Psest_1691 0.13 +0.6 1,799,423 + Psest_1691 0.61 +1.4 1,799,423 + Psest_1691 0.61 +1.2 1,799,640 + Psest_1691 0.87 -1.7 1,799,640 + Psest_1691 0.87 +0.1
Or see this region's nucleotide sequence