Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1658 and Psest_1659 overlap by 1 nucleotides Psest_1659 and Psest_1660 are separated by 15 nucleotides Psest_1660 and Psest_1661 are separated by 1 nucleotides
Psest_1658: Psest_1658 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit, at 1,768,214 to 1,768,882
_1658
Psest_1659: Psest_1659 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit, at 1,768,882 to 1,769,490
_1659
Psest_1660: Psest_1660 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit, at 1,769,506 to 1,770,729
_1660
Psest_1661: Psest_1661 - Membrane-associated lipoprotein involved in thiamine biosynthesis, at 1,770,731 to 1,771,783
_1661
Position (kb)
1769
1770
1771 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 1768.716 kb on + strand, within Psest_1658 at 1768.891 kb on + strand at 1769.059 kb on + strand, within Psest_1659 at 1769.060 kb on - strand, within Psest_1659 at 1769.065 kb on + strand, within Psest_1659 at 1769.140 kb on + strand, within Psest_1659 at 1769.140 kb on + strand, within Psest_1659 at 1769.194 kb on + strand, within Psest_1659 at 1769.209 kb on + strand, within Psest_1659 at 1769.293 kb on + strand, within Psest_1659 at 1769.317 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.480 kb on + strand at 1769.488 kb on + strand at 1770.064 kb on + strand, within Psest_1660 at 1770.100 kb on + strand, within Psest_1660 at 1770.244 kb on + strand, within Psest_1660 at 1770.457 kb on + strand, within Psest_1660 at 1770.469 kb on + strand, within Psest_1660 at 1770.469 kb on + strand, within Psest_1660 at 1770.589 kb on + strand, within Psest_1660 at 1770.628 kb on + strand at 1770.628 kb on + strand at 1770.628 kb on + strand at 1770.770 kb on + strand at 1770.770 kb on + strand at 1770.872 kb on + strand, within Psest_1661 at 1770.872 kb on + strand, within Psest_1661 at 1770.872 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1771.647 kb on + strand, within Psest_1661
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,768,716 + Psest_1658 0.75 +1.3 1,768,891 + -1.5 1,769,059 + Psest_1659 0.29 +0.3 1,769,060 - Psest_1659 0.29 -1.0 1,769,065 + Psest_1659 0.30 +1.0 1,769,140 + Psest_1659 0.42 -0.3 1,769,140 + Psest_1659 0.42 -2.0 1,769,194 + Psest_1659 0.51 +2.3 1,769,209 + Psest_1659 0.54 +1.3 1,769,293 + Psest_1659 0.67 +0.9 1,769,317 + Psest_1659 0.71 -1.7 1,769,389 + Psest_1659 0.83 -1.0 1,769,389 + Psest_1659 0.83 +5.0 1,769,389 + Psest_1659 0.83 +5.5 1,769,389 + Psest_1659 0.83 +3.4 1,769,389 + Psest_1659 0.83 +0.9 1,769,480 + -1.3 1,769,488 + -0.7 1,770,064 + Psest_1660 0.46 +4.1 1,770,100 + Psest_1660 0.49 +0.5 1,770,244 + Psest_1660 0.60 +2.8 1,770,457 + Psest_1660 0.78 -1.7 1,770,469 + Psest_1660 0.79 +0.8 1,770,469 + Psest_1660 0.79 +1.9 1,770,589 + Psest_1660 0.88 +3.7 1,770,628 + +1.9 1,770,628 + +4.0 1,770,628 + +0.5 1,770,770 + +1.6 1,770,770 + +4.0 1,770,872 + Psest_1661 0.13 +2.5 1,770,872 + Psest_1661 0.13 +4.7 1,770,872 + Psest_1661 0.13 +5.7 1,770,884 + Psest_1661 0.15 +1.3 1,770,884 + Psest_1661 0.15 +0.3 1,770,884 + Psest_1661 0.15 +0.3 1,770,884 + Psest_1661 0.15 +3.6 1,770,884 + Psest_1661 0.15 +1.3 1,770,884 + Psest_1661 0.15 +4.0 1,770,884 + Psest_1661 0.15 +6.9 1,771,647 + Psest_1661 0.87 +1.9
Or see this region's nucleotide sequence