Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1656 and Psest_1657 overlap by 8 nucleotides Psest_1657 and Psest_1658 are separated by 2 nucleotides Psest_1658 and Psest_1659 overlap by 1 nucleotides
Psest_1656: Psest_1656 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit, at 1,766,213 to 1,767,424
_1656
Psest_1657: Psest_1657 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit, at 1,767,417 to 1,768,211
_1657
Psest_1658: Psest_1658 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit, at 1,768,214 to 1,768,882
_1658
Psest_1659: Psest_1659 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit, at 1,768,882 to 1,769,490
_1659
Position (kb)
1767
1768
1769 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1766.576 kb on + strand, within Psest_1656 at 1766.576 kb on + strand, within Psest_1656 at 1766.591 kb on + strand, within Psest_1656 at 1766.591 kb on + strand, within Psest_1656 at 1767.172 kb on + strand, within Psest_1656 at 1767.172 kb on + strand, within Psest_1656 at 1767.415 kb on + strand at 1767.415 kb on + strand at 1767.415 kb on + strand at 1767.422 kb on + strand at 1767.798 kb on + strand, within Psest_1657 at 1767.798 kb on + strand, within Psest_1657 at 1767.798 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1768.187 kb on + strand at 1768.487 kb on + strand, within Psest_1658 at 1768.716 kb on + strand, within Psest_1658 at 1768.891 kb on + strand at 1769.059 kb on + strand, within Psest_1659 at 1769.060 kb on - strand, within Psest_1659 at 1769.065 kb on + strand, within Psest_1659 at 1769.140 kb on + strand, within Psest_1659 at 1769.140 kb on + strand, within Psest_1659 at 1769.194 kb on + strand, within Psest_1659 at 1769.209 kb on + strand, within Psest_1659
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,766,576 + Psest_1656 0.30 +1.8 1,766,576 + Psest_1656 0.30 +1.5 1,766,591 + Psest_1656 0.31 +3.8 1,766,591 + Psest_1656 0.31 +3.9 1,767,172 + Psest_1656 0.79 +1.6 1,767,172 + Psest_1656 0.79 -1.0 1,767,415 + +5.0 1,767,415 + +1.3 1,767,415 + +4.0 1,767,422 + +4.1 1,767,798 + Psest_1657 0.48 +0.1 1,767,798 + Psest_1657 0.48 +3.9 1,767,798 + Psest_1657 0.48 +0.5 1,767,800 + Psest_1657 0.48 +0.9 1,767,800 + Psest_1657 0.48 +0.3 1,767,800 + Psest_1657 0.48 +1.0 1,768,187 + +2.8 1,768,487 + Psest_1658 0.41 +1.3 1,768,716 + Psest_1658 0.75 +1.3 1,768,891 + -1.5 1,769,059 + Psest_1659 0.29 +0.3 1,769,060 - Psest_1659 0.29 -1.0 1,769,065 + Psest_1659 0.30 +1.0 1,769,140 + Psest_1659 0.42 -0.3 1,769,140 + Psest_1659 0.42 -2.0 1,769,194 + Psest_1659 0.51 +2.3 1,769,209 + Psest_1659 0.54 +1.3
Or see this region's nucleotide sequence