Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1203 and Psest_1204 are separated by 347 nucleotides Psest_1204 and Psest_1205 are separated by 306 nucleotides Psest_1205 and Psest_1206 overlap by 4 nucleotides
Psest_1203: Psest_1203 - Permeases, at 1,305,714 to 1,307,060
_1203
Psest_1204: Psest_1204 - Transcriptional regulators, at 1,307,408 to 1,308,163
_1204
Psest_1205: Psest_1205 - ABC-type Mn/Zn transport systems, ATPase component, at 1,308,470 to 1,309,141
_1205
Psest_1206: Psest_1206 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 1,309,138 to 1,310,001
_1206
Position (kb)
1307
1308
1309 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1306.434 kb on + strand, within Psest_1203 at 1306.434 kb on + strand, within Psest_1203 at 1306.435 kb on - strand, within Psest_1203 at 1306.435 kb on - strand, within Psest_1203 at 1306.435 kb on - strand, within Psest_1203 at 1306.707 kb on + strand, within Psest_1203 at 1306.707 kb on + strand, within Psest_1203 at 1306.742 kb on + strand, within Psest_1203 at 1306.742 kb on + strand, within Psest_1203 at 1306.743 kb on - strand, within Psest_1203 at 1306.743 kb on - strand, within Psest_1203 at 1306.743 kb on - strand, within Psest_1203 at 1306.743 kb on - strand, within Psest_1203 at 1306.743 kb on - strand, within Psest_1203 at 1306.743 kb on - strand, within Psest_1203 at 1306.743 kb on - strand, within Psest_1203 at 1306.743 kb on - strand, within Psest_1203 at 1306.745 kb on - strand, within Psest_1203 at 1306.745 kb on - strand, within Psest_1203 at 1306.745 kb on - strand, within Psest_1203 at 1306.745 kb on - strand, within Psest_1203 at 1306.745 kb on - strand, within Psest_1203 at 1306.802 kb on - strand, within Psest_1203 at 1306.802 kb on - strand, within Psest_1203 at 1306.912 kb on + strand, within Psest_1203 at 1306.913 kb on - strand, within Psest_1203 at 1306.913 kb on - strand, within Psest_1203 at 1306.913 kb on - strand, within Psest_1203 at 1306.913 kb on - strand, within Psest_1203 at 1306.913 kb on - strand, within Psest_1203 at 1306.913 kb on - strand, within Psest_1203 at 1307.103 kb on + strand at 1307.104 kb on - strand at 1307.180 kb on + strand at 1307.192 kb on + strand at 1307.210 kb on + strand at 1307.252 kb on + strand at 1307.253 kb on - strand at 1307.261 kb on + strand at 1307.261 kb on + strand at 1307.262 kb on - strand at 1307.262 kb on - strand at 1307.329 kb on + strand at 1307.486 kb on + strand, within Psest_1204 at 1307.565 kb on + strand, within Psest_1204 at 1307.565 kb on + strand, within Psest_1204 at 1307.566 kb on - strand, within Psest_1204 at 1307.629 kb on - strand, within Psest_1204 at 1307.973 kb on - strand, within Psest_1204 at 1307.973 kb on - strand, within Psest_1204 at 1308.207 kb on + strand at 1308.207 kb on + strand at 1308.208 kb on - strand at 1308.287 kb on + strand at 1308.288 kb on - strand at 1308.288 kb on - strand at 1308.322 kb on - strand at 1308.343 kb on + strand at 1308.343 kb on + strand at 1308.343 kb on + strand at 1308.343 kb on + strand at 1308.344 kb on - strand at 1308.465 kb on + strand at 1308.465 kb on + strand at 1308.466 kb on - strand at 1308.466 kb on - strand at 1308.518 kb on - strand at 1308.607 kb on - strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.640 kb on + strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.641 kb on - strand, within Psest_1205 at 1308.642 kb on + strand, within Psest_1205 at 1308.642 kb on + strand, within Psest_1205 at 1308.642 kb on + strand, within Psest_1205 at 1308.642 kb on + strand, within Psest_1205 at 1308.642 kb on + strand, within Psest_1205 at 1308.643 kb on - strand, within Psest_1205 at 1308.643 kb on - strand, within Psest_1205 at 1308.677 kb on + strand, within Psest_1205 at 1309.022 kb on - strand, within Psest_1205
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,306,434 + Psest_1203 0.53 -0.2 1,306,434 + Psest_1203 0.53 +0.2 1,306,435 - Psest_1203 0.54 -0.7 1,306,435 - Psest_1203 0.54 +0.6 1,306,435 - Psest_1203 0.54 -0.2 1,306,707 + Psest_1203 0.74 +1.2 1,306,707 + Psest_1203 0.74 +1.3 1,306,742 + Psest_1203 0.76 +0.3 1,306,742 + Psest_1203 0.76 -0.9 1,306,743 - Psest_1203 0.76 -2.7 1,306,743 - Psest_1203 0.76 +0.6 1,306,743 - Psest_1203 0.76 -1.1 1,306,743 - Psest_1203 0.76 +0.6 1,306,743 - Psest_1203 0.76 -0.0 1,306,743 - Psest_1203 0.76 -2.2 1,306,743 - Psest_1203 0.76 -2.4 1,306,743 - Psest_1203 0.76 -1.2 1,306,745 - Psest_1203 0.77 -0.7 1,306,745 - Psest_1203 0.77 -2.1 1,306,745 - Psest_1203 0.77 +0.2 1,306,745 - Psest_1203 0.77 -0.3 1,306,745 - Psest_1203 0.77 +1.2 1,306,802 - Psest_1203 0.81 -0.7 1,306,802 - Psest_1203 0.81 -0.5 1,306,912 + Psest_1203 0.89 +1.6 1,306,913 - Psest_1203 0.89 -1.4 1,306,913 - Psest_1203 0.89 -1.4 1,306,913 - Psest_1203 0.89 +1.1 1,306,913 - Psest_1203 0.89 +0.1 1,306,913 - Psest_1203 0.89 -1.8 1,306,913 - Psest_1203 0.89 +0.4 1,307,103 + -0.7 1,307,104 - +3.3 1,307,180 + +0.3 1,307,192 + -0.4 1,307,210 + -0.2 1,307,252 + +0.2 1,307,253 - +0.9 1,307,261 + -1.9 1,307,261 + +0.2 1,307,262 - -1.5 1,307,262 - +2.2 1,307,329 + +1.0 1,307,486 + Psest_1204 0.10 +2.7 1,307,565 + Psest_1204 0.21 +0.3 1,307,565 + Psest_1204 0.21 +2.0 1,307,566 - Psest_1204 0.21 -1.4 1,307,629 - Psest_1204 0.29 +2.1 1,307,973 - Psest_1204 0.75 +2.4 1,307,973 - Psest_1204 0.75 +1.4 1,308,207 + +0.5 1,308,207 + +0.2 1,308,208 - -0.8 1,308,287 + +2.6 1,308,288 - +0.0 1,308,288 - -1.9 1,308,322 - +0.3 1,308,343 + -1.3 1,308,343 + +1.0 1,308,343 + -0.4 1,308,343 + -1.2 1,308,344 - -0.6 1,308,465 + +1.0 1,308,465 + +0.7 1,308,466 - -2.0 1,308,466 - +0.0 1,308,518 - -1.2 1,308,607 - Psest_1205 0.20 -0.8 1,308,640 + Psest_1205 0.25 +1.0 1,308,640 + Psest_1205 0.25 -0.6 1,308,640 + Psest_1205 0.25 -0.0 1,308,640 + Psest_1205 0.25 +0.5 1,308,640 + Psest_1205 0.25 -0.2 1,308,640 + Psest_1205 0.25 +0.1 1,308,640 + Psest_1205 0.25 +0.2 1,308,640 + Psest_1205 0.25 -0.6 1,308,640 + Psest_1205 0.25 +0.4 1,308,640 + Psest_1205 0.25 +0.7 1,308,640 + Psest_1205 0.25 +0.3 1,308,640 + Psest_1205 0.25 -0.4 1,308,641 - Psest_1205 0.25 -1.2 1,308,641 - Psest_1205 0.25 -1.1 1,308,641 - Psest_1205 0.25 -1.2 1,308,641 - Psest_1205 0.25 +0.5 1,308,641 - Psest_1205 0.25 +0.0 1,308,641 - Psest_1205 0.25 +1.3 1,308,641 - Psest_1205 0.25 +1.1 1,308,641 - Psest_1205 0.25 +0.1 1,308,641 - Psest_1205 0.25 -1.4 1,308,641 - Psest_1205 0.25 +0.4 1,308,641 - Psest_1205 0.25 +1.4 1,308,642 + Psest_1205 0.26 -1.4 1,308,642 + Psest_1205 0.26 -2.7 1,308,642 + Psest_1205 0.26 -1.2 1,308,642 + Psest_1205 0.26 +0.4 1,308,642 + Psest_1205 0.26 +0.1 1,308,643 - Psest_1205 0.26 +1.0 1,308,643 - Psest_1205 0.26 -1.3 1,308,677 + Psest_1205 0.31 +0.2 1,309,022 - Psest_1205 0.82 +0.2
Or see this region's nucleotide sequence