Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0776 and Psest_0777 are separated by 4 nucleotides Psest_0777 and Psest_0778 are separated by 84 nucleotides Psest_0778 and Psest_0779 are separated by 195 nucleotides
Psest_0776: Psest_0776 - FOG: Ankyrin repeat, at 845,785 to 846,339
_0776
Psest_0777: Psest_0777 - cyanate hydratase, at 846,344 to 846,793
_0777
Psest_0778: Psest_0778 - Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin, at 846,878 to 847,639
_0778
Psest_0779: Psest_0779 - tyrosine aminotransferase (EC 2.6.1.57) <small>(from data)</small>, at 847,835 to 849,031
_0779
Position (kb) 846
847
848 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 845.906 kb on - strand, within Psest_0776 at 845.998 kb on + strand, within Psest_0776 at 845.999 kb on - strand, within Psest_0776 at 846.022 kb on + strand, within Psest_0776 at 846.023 kb on - strand, within Psest_0776 at 846.023 kb on - strand, within Psest_0776 at 846.023 kb on - strand, within Psest_0776 at 846.211 kb on + strand, within Psest_0776 at 846.211 kb on + strand, within Psest_0776 at 846.212 kb on + strand, within Psest_0776 at 846.212 kb on - strand, within Psest_0776 at 846.212 kb on - strand, within Psest_0776 at 846.212 kb on - strand, within Psest_0776 at 846.212 kb on - strand, within Psest_0776 at 846.212 kb on - strand, within Psest_0776 at 846.348 kb on + strand at 846.348 kb on + strand at 846.349 kb on - strand at 846.519 kb on + strand, within Psest_0777 at 846.528 kb on + strand, within Psest_0777 at 846.573 kb on + strand, within Psest_0777 at 846.574 kb on - strand, within Psest_0777 at 846.574 kb on - strand, within Psest_0777 at 846.743 kb on + strand, within Psest_0777 at 846.743 kb on + strand, within Psest_0777 at 846.743 kb on + strand, within Psest_0777 at 846.743 kb on + strand, within Psest_0777 at 846.743 kb on + strand, within Psest_0777 at 846.744 kb on - strand, within Psest_0777 at 846.744 kb on - strand, within Psest_0777 at 846.885 kb on + strand at 846.885 kb on + strand at 846.973 kb on - strand, within Psest_0778 at 846.973 kb on - strand, within Psest_0778 at 847.020 kb on - strand, within Psest_0778 at 847.230 kb on + strand, within Psest_0778 at 847.230 kb on + strand, within Psest_0778 at 847.230 kb on + strand, within Psest_0778 at 847.231 kb on - strand, within Psest_0778 at 847.375 kb on + strand, within Psest_0778 at 847.671 kb on + strand at 847.671 kb on + strand at 847.671 kb on + strand at 847.671 kb on + strand at 847.671 kb on + strand at 847.672 kb on - strand at 847.672 kb on - strand at 847.672 kb on - strand at 847.836 kb on + strand at 847.836 kb on + strand at 847.837 kb on - strand at 847.929 kb on + strand at 847.929 kb on + strand at 847.929 kb on + strand at 847.929 kb on + strand at 847.929 kb on + strand at 847.930 kb on - strand at 847.959 kb on - strand, within Psest_0779 at 847.983 kb on + strand, within Psest_0779 at 847.983 kb on + strand, within Psest_0779 at 847.983 kb on + strand, within Psest_0779 at 847.984 kb on - strand, within Psest_0779 at 848.584 kb on - strand, within Psest_0779 at 848.584 kb on - strand, within Psest_0779
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 845,906 - Psest_0776 0.22 +1.0 845,998 + Psest_0776 0.38 +2.3 845,999 - Psest_0776 0.39 -0.2 846,022 + Psest_0776 0.43 -0.6 846,023 - Psest_0776 0.43 +0.2 846,023 - Psest_0776 0.43 -0.6 846,023 - Psest_0776 0.43 -1.0 846,211 + Psest_0776 0.77 +1.6 846,211 + Psest_0776 0.77 -0.6 846,212 + Psest_0776 0.77 +1.0 846,212 - Psest_0776 0.77 +0.0 846,212 - Psest_0776 0.77 -0.7 846,212 - Psest_0776 0.77 +0.8 846,212 - Psest_0776 0.77 -0.1 846,212 - Psest_0776 0.77 -0.9 846,348 + -0.3 846,348 + +0.1 846,349 - -2.1 846,519 + Psest_0777 0.39 +0.1 846,528 + Psest_0777 0.41 +0.1 846,573 + Psest_0777 0.51 +1.1 846,574 - Psest_0777 0.51 +2.1 846,574 - Psest_0777 0.51 +0.4 846,743 + Psest_0777 0.89 +0.3 846,743 + Psest_0777 0.89 +1.5 846,743 + Psest_0777 0.89 -0.1 846,743 + Psest_0777 0.89 -1.3 846,743 + Psest_0777 0.89 +0.9 846,744 - Psest_0777 0.89 -3.3 846,744 - Psest_0777 0.89 -0.2 846,885 + -2.8 846,885 + -0.2 846,973 - Psest_0778 0.12 -0.8 846,973 - Psest_0778 0.12 +0.1 847,020 - Psest_0778 0.19 -1.5 847,230 + Psest_0778 0.46 -1.2 847,230 + Psest_0778 0.46 +0.5 847,230 + Psest_0778 0.46 -1.0 847,231 - Psest_0778 0.46 -0.8 847,375 + Psest_0778 0.65 -0.6 847,671 + -0.2 847,671 + -0.4 847,671 + +0.2 847,671 + +1.1 847,671 + +0.1 847,672 - -1.1 847,672 - -0.8 847,672 - +0.5 847,836 + -1.6 847,836 + -0.7 847,837 - -0.0 847,929 + +0.4 847,929 + +0.9 847,929 + +0.6 847,929 + +1.7 847,929 + +0.8 847,930 - -0.9 847,959 - Psest_0779 0.10 +1.2 847,983 + Psest_0779 0.12 -0.9 847,983 + Psest_0779 0.12 -1.0 847,983 + Psest_0779 0.12 +0.1 847,984 - Psest_0779 0.12 +0.5 848,584 - Psest_0779 0.63 -0.0 848,584 - Psest_0779 0.63 -0.9
Or see this region's nucleotide sequence