Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0071 and Psest_0072 are separated by 96 nucleotides Psest_0072 and Psest_0073 overlap by 4 nucleotides
Psest_0071: Psest_0071 - UDP-galactopyranose mutase, at 71,892 to 73,112
_0071
Psest_0072: Psest_0072 - hypothetical protein, at 73,209 to 74,363
_0072
Psest_0073: Psest_0073 - ABC-type multidrug transport system, ATPase and permease components, at 74,360 to 76,165
_0073
Position (kb) 73
74
75 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 72.211 kb on - strand, within Psest_0071 at 72.559 kb on - strand, within Psest_0071 at 72.559 kb on - strand, within Psest_0071 at 72.615 kb on - strand, within Psest_0071 at 72.648 kb on + strand, within Psest_0071 at 72.684 kb on + strand, within Psest_0071 at 72.684 kb on + strand, within Psest_0071 at 72.684 kb on + strand, within Psest_0071 at 72.684 kb on + strand, within Psest_0071 at 72.685 kb on - strand, within Psest_0071 at 72.685 kb on - strand, within Psest_0071 at 72.685 kb on - strand, within Psest_0071 at 72.685 kb on - strand, within Psest_0071 at 72.685 kb on - strand, within Psest_0071 at 72.693 kb on + strand, within Psest_0071 at 72.694 kb on - strand, within Psest_0071 at 72.804 kb on + strand, within Psest_0071 at 72.822 kb on + strand, within Psest_0071 at 72.823 kb on - strand, within Psest_0071 at 72.868 kb on - strand, within Psest_0071 at 72.868 kb on - strand, within Psest_0071 at 72.868 kb on - strand, within Psest_0071 at 72.868 kb on - strand, within Psest_0071 at 72.868 kb on - strand, within Psest_0071 at 72.868 kb on - strand, within Psest_0071 at 72.898 kb on - strand, within Psest_0071 at 72.898 kb on - strand, within Psest_0071 at 72.900 kb on + strand, within Psest_0071 at 72.901 kb on - strand, within Psest_0071 at 72.933 kb on + strand, within Psest_0071 at 72.933 kb on + strand, within Psest_0071 at 72.934 kb on - strand, within Psest_0071 at 72.934 kb on - strand, within Psest_0071 at 72.999 kb on + strand at 72.999 kb on + strand at 72.999 kb on + strand at 72.999 kb on + strand at 72.999 kb on + strand at 72.999 kb on + strand at 72.999 kb on + strand at 72.999 kb on + strand at 72.999 kb on + strand at 72.999 kb on + strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.000 kb on - strand at 73.005 kb on + strand at 73.005 kb on + strand at 73.005 kb on + strand at 73.005 kb on + strand at 73.005 kb on + strand at 73.005 kb on + strand at 73.005 kb on + strand at 73.005 kb on + strand at 73.006 kb on - strand at 73.006 kb on - strand at 73.006 kb on - strand at 73.006 kb on - strand at 73.006 kb on - strand at 73.006 kb on - strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.008 kb on + strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.009 kb on - strand at 73.047 kb on + strand at 73.047 kb on + strand at 73.047 kb on + strand at 73.047 kb on + strand at 73.047 kb on + strand at 73.047 kb on + strand at 73.048 kb on - strand at 73.048 kb on - strand at 73.048 kb on - strand at 73.048 kb on - strand at 73.048 kb on - strand at 73.127 kb on + strand at 73.203 kb on + strand at 73.204 kb on - strand at 73.204 kb on - strand at 73.419 kb on + strand, within Psest_0072 at 73.420 kb on - strand, within Psest_0072 at 73.611 kb on + strand, within Psest_0072 at 73.611 kb on + strand, within Psest_0072 at 73.611 kb on + strand, within Psest_0072 at 73.611 kb on + strand, within Psest_0072 at 73.611 kb on + strand, within Psest_0072 at 73.612 kb on - strand, within Psest_0072 at 73.612 kb on - strand, within Psest_0072 at 73.612 kb on - strand, within Psest_0072 at 73.612 kb on - strand, within Psest_0072 at 73.612 kb on - strand, within Psest_0072 at 73.612 kb on - strand, within Psest_0072 at 73.665 kb on + strand, within Psest_0072 at 73.665 kb on + strand, within Psest_0072 at 73.666 kb on - strand, within Psest_0072 at 73.666 kb on - strand, within Psest_0072 at 73.666 kb on - strand, within Psest_0072 at 73.666 kb on - strand, within Psest_0072 at 73.666 kb on - strand, within Psest_0072 at 73.923 kb on + strand, within Psest_0072 at 73.923 kb on + strand, within Psest_0072 at 73.924 kb on - strand, within Psest_0072 at 73.924 kb on - strand, within Psest_0072 at 73.924 kb on - strand, within Psest_0072 at 73.947 kb on + strand, within Psest_0072 at 73.947 kb on + strand, within Psest_0072 at 73.947 kb on + strand, within Psest_0072 at 73.947 kb on + strand, within Psest_0072 at 73.948 kb on - strand, within Psest_0072 at 73.948 kb on - strand, within Psest_0072 at 73.948 kb on - strand, within Psest_0072 at 73.948 kb on - strand, within Psest_0072 at 73.948 kb on - strand, within Psest_0072 at 73.948 kb on - strand, within Psest_0072 at 73.948 kb on - strand, within Psest_0072 at 73.950 kb on + strand, within Psest_0072 at 73.950 kb on + strand, within Psest_0072 at 73.950 kb on + strand, within Psest_0072 at 73.951 kb on - strand, within Psest_0072 at 74.118 kb on + strand, within Psest_0072 at 74.119 kb on - strand, within Psest_0072 at 74.119 kb on - strand, within Psest_0072 at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.441 kb on + strand at 74.442 kb on - strand at 74.442 kb on - strand at 74.442 kb on - strand at 74.442 kb on - strand at 74.442 kb on - strand at 74.535 kb on + strand at 74.535 kb on + strand at 74.536 kb on - strand at 74.810 kb on + strand, within Psest_0073 at 74.810 kb on + strand, within Psest_0073 at 74.810 kb on + strand, within Psest_0073 at 74.810 kb on + strand, within Psest_0073 at 74.811 kb on - strand, within Psest_0073 at 75.135 kb on - strand, within Psest_0073 at 75.135 kb on - strand, within Psest_0073 at 75.135 kb on - strand, within Psest_0073
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 72,211 - Psest_0071 0.26 +0.4 72,559 - Psest_0071 0.55 -1.3 72,559 - Psest_0071 0.55 -1.4 72,615 - Psest_0071 0.59 -0.8 72,648 + Psest_0071 0.62 -1.3 72,684 + Psest_0071 0.65 -0.1 72,684 + Psest_0071 0.65 -0.1 72,684 + Psest_0071 0.65 -0.4 72,684 + Psest_0071 0.65 -0.4 72,685 - Psest_0071 0.65 -1.8 72,685 - Psest_0071 0.65 -0.9 72,685 - Psest_0071 0.65 +1.0 72,685 - Psest_0071 0.65 +0.4 72,685 - Psest_0071 0.65 -1.3 72,693 + Psest_0071 0.66 -0.2 72,694 - Psest_0071 0.66 -0.7 72,804 + Psest_0071 0.75 +0.8 72,822 + Psest_0071 0.76 +0.9 72,823 - Psest_0071 0.76 -1.1 72,868 - Psest_0071 0.80 -0.3 72,868 - Psest_0071 0.80 -2.0 72,868 - Psest_0071 0.80 +1.7 72,868 - Psest_0071 0.80 -1.3 72,868 - Psest_0071 0.80 -0.5 72,868 - Psest_0071 0.80 -0.4 72,898 - Psest_0071 0.82 -0.6 72,898 - Psest_0071 0.82 +0.4 72,900 + Psest_0071 0.83 -0.3 72,901 - Psest_0071 0.83 +0.7 72,933 + Psest_0071 0.85 -0.6 72,933 + Psest_0071 0.85 -0.6 72,934 - Psest_0071 0.85 -1.0 72,934 - Psest_0071 0.85 -0.6 72,999 + +1.5 72,999 + +0.1 72,999 + +0.7 72,999 + +0.7 72,999 + +1.1 72,999 + +0.3 72,999 + +1.0 72,999 + +1.0 72,999 + -0.3 72,999 + -0.5 73,000 - +0.4 73,000 - +2.2 73,000 - +0.4 73,000 - -2.1 73,000 - +0.5 73,000 - +0.3 73,000 - +0.4 73,000 - +0.0 73,000 - -0.9 73,000 - -0.7 73,000 - -1.3 73,005 + -0.4 73,005 + -1.3 73,005 + -1.7 73,005 + +1.6 73,005 + -1.2 73,005 + -0.2 73,005 + +0.8 73,005 + -0.3 73,006 - +1.0 73,006 - -0.9 73,006 - +0.7 73,006 - +0.2 73,006 - -2.1 73,006 - -2.6 73,008 + +0.5 73,008 + +0.9 73,008 + +0.8 73,008 + -0.9 73,008 + +1.0 73,009 - -1.0 73,009 - +0.6 73,009 - +0.1 73,009 - +0.3 73,009 - +0.6 73,009 - -0.6 73,009 - +3.9 73,009 - +0.6 73,047 + -0.8 73,047 + +0.3 73,047 + -0.5 73,047 + +0.9 73,047 + +0.2 73,047 + -0.7 73,048 - -0.1 73,048 - +0.2 73,048 - -0.7 73,048 - -1.4 73,048 - +0.3 73,127 + +0.2 73,203 + -0.8 73,204 - -1.3 73,204 - +0.8 73,419 + Psest_0072 0.18 -1.1 73,420 - Psest_0072 0.18 +1.3 73,611 + Psest_0072 0.35 +1.4 73,611 + Psest_0072 0.35 +0.2 73,611 + Psest_0072 0.35 -0.9 73,611 + Psest_0072 0.35 -2.1 73,611 + Psest_0072 0.35 +1.3 73,612 - Psest_0072 0.35 +0.6 73,612 - Psest_0072 0.35 -0.9 73,612 - Psest_0072 0.35 -1.8 73,612 - Psest_0072 0.35 -1.1 73,612 - Psest_0072 0.35 +1.5 73,612 - Psest_0072 0.35 -0.0 73,665 + Psest_0072 0.39 +0.2 73,665 + Psest_0072 0.39 -0.1 73,666 - Psest_0072 0.40 +0.2 73,666 - Psest_0072 0.40 +3.5 73,666 - Psest_0072 0.40 -0.7 73,666 - Psest_0072 0.40 +3.8 73,666 - Psest_0072 0.40 +1.8 73,923 + Psest_0072 0.62 -0.1 73,923 + Psest_0072 0.62 +0.0 73,924 - Psest_0072 0.62 -0.5 73,924 - Psest_0072 0.62 -0.6 73,924 - Psest_0072 0.62 -0.3 73,947 + Psest_0072 0.64 +0.5 73,947 + Psest_0072 0.64 +1.4 73,947 + Psest_0072 0.64 +0.2 73,947 + Psest_0072 0.64 +0.4 73,948 - Psest_0072 0.64 -0.3 73,948 - Psest_0072 0.64 +1.4 73,948 - Psest_0072 0.64 -0.4 73,948 - Psest_0072 0.64 -1.1 73,948 - Psest_0072 0.64 +1.2 73,948 - Psest_0072 0.64 +0.4 73,948 - Psest_0072 0.64 +1.1 73,950 + Psest_0072 0.64 +0.1 73,950 + Psest_0072 0.64 +1.2 73,950 + Psest_0072 0.64 +1.6 73,951 - Psest_0072 0.64 -0.6 74,118 + Psest_0072 0.79 +0.3 74,119 - Psest_0072 0.79 +0.5 74,119 - Psest_0072 0.79 +0.7 74,441 + -0.6 74,441 + -0.3 74,441 + +0.3 74,441 + +2.2 74,441 + +0.5 74,441 + +1.2 74,441 + +0.2 74,441 + -1.6 74,441 + -2.6 74,441 + -0.6 74,441 + -0.2 74,441 + -0.3 74,442 - -0.0 74,442 - +1.4 74,442 - -0.3 74,442 - -0.2 74,442 - -0.4 74,535 + -1.5 74,535 + -1.6 74,536 - -1.6 74,810 + Psest_0073 0.25 +0.4 74,810 + Psest_0073 0.25 +0.4 74,810 + Psest_0073 0.25 -0.5 74,810 + Psest_0073 0.25 +1.3 74,811 - Psest_0073 0.25 -0.5 75,135 - Psest_0073 0.43 -2.4 75,135 - Psest_0073 0.43 -1.1 75,135 - Psest_0073 0.43 -0.1
Or see this region's nucleotide sequence