Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0067 and Psest_0068 are separated by 101 nucleotides Psest_0068 and Psest_0069 are separated by 79 nucleotides Psest_0069 and Psest_0070 are separated by 419 nucleotides
Psest_0067: Psest_0067 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 67,502 to 68,500
_0067
Psest_0068: Psest_0068 - Amidases related to nicotinamidase, at 68,602 to 69,156
_0068
Psest_0069: Psest_0069 - UDP-glucose-4-epimerase, at 69,236 to 70,300
_0069
Psest_0070: Psest_0070 - Glycosyltransferase, at 70,720 to 71,904
_0070
Position (kb)
69
70
71 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 68.519 kb on - strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.645 kb on - strand at 68.645 kb on - strand at 69.136 kb on + strand at 69.136 kb on + strand at 69.210 kb on + strand at 69.210 kb on + strand at 69.210 kb on + strand at 69.606 kb on + strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.651 kb on + strand, within Psest_0069 at 69.651 kb on + strand, within Psest_0069 at 69.652 kb on - strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.671 kb on - strand, within Psest_0069 at 69.696 kb on + strand, within Psest_0069 at 69.696 kb on + strand, within Psest_0069 at 69.697 kb on - strand, within Psest_0069 at 69.697 kb on - strand, within Psest_0069 at 69.775 kb on - strand, within Psest_0069 at 69.775 kb on - strand, within Psest_0069 at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.268 kb on + strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.269 kb on - strand at 70.272 kb on + strand at 70.272 kb on + strand at 70.272 kb on + strand at 70.273 kb on - strand at 70.273 kb on - strand at 70.273 kb on - strand at 70.273 kb on - strand at 70.306 kb on + strand at 70.306 kb on + strand at 70.307 kb on - strand at 70.383 kb on - strand at 70.451 kb on - strand at 70.503 kb on + strand at 70.717 kb on + strand at 70.717 kb on + strand at 70.717 kb on + strand at 70.717 kb on + strand at 70.717 kb on + strand at 70.717 kb on + strand at 70.717 kb on + strand at 70.717 kb on + strand at 70.717 kb on + strand at 70.718 kb on - strand at 70.718 kb on - strand at 70.718 kb on - strand at 70.718 kb on - strand at 70.718 kb on - strand at 70.718 kb on - strand at 70.718 kb on - strand at 70.718 kb on - strand at 70.718 kb on - strand at 70.745 kb on - strand at 70.894 kb on + strand, within Psest_0070 at 70.894 kb on + strand, within Psest_0070 at 70.894 kb on + strand, within Psest_0070 at 70.894 kb on + strand, within Psest_0070 at 70.895 kb on - strand, within Psest_0070 at 70.895 kb on - strand, within Psest_0070 at 70.895 kb on - strand, within Psest_0070 at 70.895 kb on - strand, within Psest_0070 at 71.056 kb on + strand, within Psest_0070 at 71.098 kb on + strand, within Psest_0070 at 71.098 kb on + strand, within Psest_0070 at 71.098 kb on + strand, within Psest_0070 at 71.099 kb on - strand, within Psest_0070 at 71.099 kb on - strand, within Psest_0070 at 71.099 kb on - strand, within Psest_0070 at 71.099 kb on - strand, within Psest_0070 at 71.152 kb on + strand, within Psest_0070 at 71.152 kb on + strand, within Psest_0070 at 71.152 kb on + strand, within Psest_0070 at 71.152 kb on + strand, within Psest_0070 at 71.153 kb on - strand, within Psest_0070 at 71.267 kb on - strand, within Psest_0070 at 71.267 kb on - strand, within Psest_0070
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 68,519 - -0.1 68,559 + -0.5 68,559 + +1.0 68,559 + -0.3 68,559 + +0.4 68,559 + +0.6 68,559 + -1.4 68,559 + +0.9 68,559 + -1.0 68,559 + -2.7 68,559 + +0.3 68,559 + -0.7 68,559 + -0.3 68,559 + -0.3 68,559 + +0.1 68,559 + -1.1 68,560 - -0.2 68,560 - -0.7 68,560 - -1.0 68,560 - -0.6 68,560 - -0.4 68,560 - +1.0 68,560 - -0.7 68,560 - +2.3 68,560 - +1.0 68,560 - -0.2 68,560 - -1.0 68,560 - -1.4 68,560 - -1.9 68,560 - -1.4 68,560 - -4.0 68,560 - -2.3 68,645 - +0.2 68,645 - +0.0 69,136 + +0.5 69,136 + -1.0 69,210 + -0.3 69,210 + +0.1 69,210 + -1.3 69,606 + Psest_0069 0.35 -0.5 69,607 - Psest_0069 0.35 -0.4 69,607 - Psest_0069 0.35 -0.3 69,607 - Psest_0069 0.35 -0.8 69,607 - Psest_0069 0.35 +2.1 69,607 - Psest_0069 0.35 -1.4 69,607 - Psest_0069 0.35 -1.3 69,651 + Psest_0069 0.39 +2.6 69,651 + Psest_0069 0.39 -1.1 69,652 - Psest_0069 0.39 -3.7 69,670 + Psest_0069 0.41 -0.5 69,670 + Psest_0069 0.41 -2.2 69,670 + Psest_0069 0.41 -2.0 69,671 - Psest_0069 0.41 +1.2 69,696 + Psest_0069 0.43 -0.7 69,696 + Psest_0069 0.43 -0.5 69,697 - Psest_0069 0.43 -1.6 69,697 - Psest_0069 0.43 -1.2 69,775 - Psest_0069 0.51 +1.0 69,775 - Psest_0069 0.51 -0.4 70,268 + -0.1 70,268 + +0.8 70,268 + -0.6 70,268 + -0.6 70,268 + -1.0 70,268 + -2.5 70,268 + -0.7 70,268 + +0.1 70,268 + +2.0 70,268 + -0.0 70,268 + +1.4 70,268 + +0.6 70,269 - +1.5 70,269 - -0.1 70,269 - -0.4 70,269 - -0.7 70,269 - -0.8 70,269 - +1.3 70,269 - +0.4 70,269 - -0.3 70,269 - +2.9 70,269 - -0.7 70,269 - -0.8 70,269 - +0.4 70,269 - +1.3 70,269 - -0.8 70,269 - -0.2 70,272 + -2.2 70,272 + +1.0 70,272 + -2.9 70,273 - +0.4 70,273 - -0.2 70,273 - +0.6 70,273 - -1.6 70,306 + -1.6 70,306 + +0.2 70,307 - -2.3 70,383 - -0.2 70,451 - +0.8 70,503 + -1.1 70,717 + -1.3 70,717 + -0.6 70,717 + +0.3 70,717 + -0.1 70,717 + +0.3 70,717 + -0.3 70,717 + -1.3 70,717 + +1.9 70,717 + -0.2 70,718 - +0.2 70,718 - +1.6 70,718 - +0.7 70,718 - -0.5 70,718 - -1.1 70,718 - +0.8 70,718 - -1.8 70,718 - +0.2 70,718 - +0.0 70,745 - +1.0 70,894 + Psest_0070 0.15 +1.7 70,894 + Psest_0070 0.15 -0.2 70,894 + Psest_0070 0.15 +0.5 70,894 + Psest_0070 0.15 +0.7 70,895 - Psest_0070 0.15 +1.5 70,895 - Psest_0070 0.15 +0.3 70,895 - Psest_0070 0.15 +1.1 70,895 - Psest_0070 0.15 +2.2 71,056 + Psest_0070 0.28 +1.5 71,098 + Psest_0070 0.32 +0.2 71,098 + Psest_0070 0.32 +0.8 71,098 + Psest_0070 0.32 -0.4 71,099 - Psest_0070 0.32 -1.5 71,099 - Psest_0070 0.32 -0.2 71,099 - Psest_0070 0.32 -0.6 71,099 - Psest_0070 0.32 +0.6 71,152 + Psest_0070 0.36 -0.4 71,152 + Psest_0070 0.36 +1.7 71,152 + Psest_0070 0.36 -0.8 71,152 + Psest_0070 0.36 -0.8 71,153 - Psest_0070 0.37 +1.8 71,267 - Psest_0070 0.46 +0.4 71,267 - Psest_0070 0.46 -0.3
Or see this region's nucleotide sequence