Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2468 and Psest_2469 are separated by 69 nucleotides Psest_2469 and Psest_2470 overlap by 4 nucleotides Psest_2470 and Psest_2471 are separated by 22 nucleotides Psest_2471 and Psest_2472 are separated by 430 nucleotides Psest_2472 and Psest_2473 are separated by 11 nucleotides
Psest_2468: Psest_2468 - uncharacterized domain 1, at 2,639,099 to 2,639,542
_2468
Psest_2469: Psest_2469 - phosphohistidine phosphatase SixA, at 2,639,612 to 2,640,070
_2469
Psest_2470: Psest_2470 - hypothetical protein, at 2,640,067 to 2,640,423
_2470
Psest_2471: Psest_2471 - Glycerol-3-phosphate dehydrogenase, at 2,640,446 to 2,641,468
_2471
Psest_2472: Psest_2472 - beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA, at 2,641,899 to 2,642,414
_2472
Psest_2473: Psest_2473 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 2,642,426 to 2,643,643
_2473
Position (kb)
2640
2641
2642 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.465 kb on - strand, within Psest_2468 at 2639.549 kb on + strand at 2639.563 kb on - strand at 2639.928 kb on - strand, within Psest_2469 at 2640.062 kb on + strand at 2640.063 kb on - strand at 2640.195 kb on + strand, within Psest_2470 at 2640.231 kb on - strand, within Psest_2470 at 2640.231 kb on - strand, within Psest_2470 at 2640.412 kb on - strand at 2640.436 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.661 kb on + strand at 2641.662 kb on - strand at 2641.663 kb on + strand at 2641.709 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.817 kb on + strand at 2641.817 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 2,639,462 + Psest_2468 0.82 +0.4 2,639,462 + Psest_2468 0.82 +0.9 2,639,462 + Psest_2468 0.82 +0.3 2,639,462 + Psest_2468 0.82 -0.8 2,639,462 + Psest_2468 0.82 +0.3 2,639,462 + Psest_2468 0.82 -1.4 2,639,462 + Psest_2468 0.82 -0.0 2,639,463 - Psest_2468 0.82 -1.4 2,639,463 - Psest_2468 0.82 -0.7 2,639,463 - Psest_2468 0.82 -0.2 2,639,463 - Psest_2468 0.82 +1.4 2,639,463 - Psest_2468 0.82 +1.9 2,639,463 - Psest_2468 0.82 -0.2 2,639,465 - Psest_2468 0.82 -1.5 2,639,549 + -1.1 2,639,563 - +1.4 2,639,928 - Psest_2469 0.69 -0.8 2,640,062 + -1.2 2,640,063 - -0.4 2,640,195 + Psest_2470 0.36 -0.9 2,640,231 - Psest_2470 0.46 +0.8 2,640,231 - Psest_2470 0.46 +1.6 2,640,412 - -0.2 2,640,436 + -1.3 2,641,514 + -2.1 2,641,514 + +0.3 2,641,514 + -0.2 2,641,514 + -0.9 2,641,514 + -0.1 2,641,514 + -0.4 2,641,515 - +0.3 2,641,515 - +2.6 2,641,515 - -0.5 2,641,515 - +0.8 2,641,515 - -2.5 2,641,661 + +0.8 2,641,662 - -0.3 2,641,663 + -0.3 2,641,709 + -0.2 2,641,811 + -0.6 2,641,811 + +1.2 2,641,811 + +0.9 2,641,811 + +1.4 2,641,817 + +1.0 2,641,817 + +1.7 2,641,856 + +1.3 2,641,856 + +0.3 2,641,856 + +2.7 2,641,856 + +0.8 2,641,856 + +0.7 2,641,856 + -0.2 2,641,856 + +1.4
Or see this region's nucleotide sequence