Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2466 and Psest_2467 overlap by 4 nucleotides Psest_2467 and Psest_2468 are separated by 40 nucleotides Psest_2468 and Psest_2469 are separated by 69 nucleotides Psest_2469 and Psest_2470 overlap by 4 nucleotides Psest_2470 and Psest_2471 are separated by 22 nucleotides
Psest_2466: Psest_2466 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 2,637,305 to 2,638,162
_2466
Psest_2467: Psest_2467 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 2,638,159 to 2,639,058
_2467
Psest_2468: Psest_2468 - uncharacterized domain 1, at 2,639,099 to 2,639,542
_2468
Psest_2469: Psest_2469 - phosphohistidine phosphatase SixA, at 2,639,612 to 2,640,070
_2469
Psest_2470: Psest_2470 - hypothetical protein, at 2,640,067 to 2,640,423
_2470
Psest_2471: Psest_2471 - Glycerol-3-phosphate dehydrogenase, at 2,640,446 to 2,641,468
_2471
Position (kb)
2639
2640 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2638.177 kb on - strand at 2638.310 kb on + strand, within Psest_2467 at 2638.310 kb on + strand, within Psest_2467 at 2638.311 kb on - strand, within Psest_2467 at 2638.416 kb on - strand, within Psest_2467 at 2638.488 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.645 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.920 kb on - strand, within Psest_2467 at 2638.959 kb on + strand, within Psest_2467 at 2638.959 kb on + strand, within Psest_2467 at 2638.960 kb on - strand, within Psest_2467 at 2639.080 kb on + strand at 2639.081 kb on - strand at 2639.081 kb on - strand at 2639.301 kb on + strand, within Psest_2468 at 2639.301 kb on + strand, within Psest_2468 at 2639.328 kb on + strand, within Psest_2468 at 2639.329 kb on - strand, within Psest_2468 at 2639.329 kb on - strand, within Psest_2468 at 2639.329 kb on - strand, within Psest_2468 at 2639.392 kb on - strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.465 kb on - strand, within Psest_2468 at 2639.549 kb on + strand at 2639.563 kb on - strand at 2639.928 kb on - strand, within Psest_2469 at 2640.062 kb on + strand at 2640.063 kb on - strand at 2640.195 kb on + strand, within Psest_2470 at 2640.231 kb on - strand, within Psest_2470 at 2640.231 kb on - strand, within Psest_2470 at 2640.412 kb on - strand at 2640.436 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 2,638,177 - +0.4 2,638,310 + Psest_2467 0.17 +0.7 2,638,310 + Psest_2467 0.17 -0.5 2,638,311 - Psest_2467 0.17 +0.8 2,638,416 - Psest_2467 0.29 +2.2 2,638,488 + Psest_2467 0.37 +1.2 2,638,490 + Psest_2467 0.37 -1.4 2,638,490 + Psest_2467 0.37 +0.1 2,638,490 + Psest_2467 0.37 +2.0 2,638,491 - Psest_2467 0.37 -1.2 2,638,491 - Psest_2467 0.37 -1.3 2,638,491 - Psest_2467 0.37 -1.9 2,638,491 - Psest_2467 0.37 +1.3 2,638,645 + Psest_2467 0.54 -0.4 2,638,703 + Psest_2467 0.60 -0.1 2,638,703 + Psest_2467 0.60 -0.2 2,638,703 + Psest_2467 0.60 -1.3 2,638,703 + Psest_2467 0.60 -0.9 2,638,703 + Psest_2467 0.60 -0.9 2,638,703 + Psest_2467 0.60 -0.2 2,638,703 + Psest_2467 0.60 -0.4 2,638,703 + Psest_2467 0.60 -0.8 2,638,704 - Psest_2467 0.61 +1.5 2,638,704 - Psest_2467 0.61 -0.4 2,638,704 - Psest_2467 0.61 -0.2 2,638,704 - Psest_2467 0.61 -2.4 2,638,920 - Psest_2467 0.85 -1.3 2,638,959 + Psest_2467 0.89 -0.5 2,638,959 + Psest_2467 0.89 +1.9 2,638,960 - Psest_2467 0.89 +1.1 2,639,080 + +1.8 2,639,081 - -0.4 2,639,081 - +0.1 2,639,301 + Psest_2468 0.45 -0.5 2,639,301 + Psest_2468 0.45 -0.9 2,639,328 + Psest_2468 0.52 -1.2 2,639,329 - Psest_2468 0.52 -1.8 2,639,329 - Psest_2468 0.52 -1.5 2,639,329 - Psest_2468 0.52 -0.2 2,639,392 - Psest_2468 0.66 -0.6 2,639,462 + Psest_2468 0.82 +0.4 2,639,462 + Psest_2468 0.82 +0.9 2,639,462 + Psest_2468 0.82 +0.3 2,639,462 + Psest_2468 0.82 -0.8 2,639,462 + Psest_2468 0.82 +0.3 2,639,462 + Psest_2468 0.82 -1.4 2,639,462 + Psest_2468 0.82 -0.0 2,639,463 - Psest_2468 0.82 -1.4 2,639,463 - Psest_2468 0.82 -0.7 2,639,463 - Psest_2468 0.82 -0.2 2,639,463 - Psest_2468 0.82 +1.4 2,639,463 - Psest_2468 0.82 +1.9 2,639,463 - Psest_2468 0.82 -0.2 2,639,465 - Psest_2468 0.82 -1.5 2,639,549 + -1.1 2,639,563 - +1.4 2,639,928 - Psest_2469 0.69 -0.8 2,640,062 + -1.2 2,640,063 - -0.4 2,640,195 + Psest_2470 0.36 -0.9 2,640,231 - Psest_2470 0.46 +0.8 2,640,231 - Psest_2470 0.46 +1.6 2,640,412 - -0.2 2,640,436 + -1.3
Or see this region's nucleotide sequence