Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2382 and Psest_2383 are separated by 34 nucleotides Psest_2383 and Psest_2384 are separated by 93 nucleotides Psest_2384 and Psest_2385 overlap by 4 nucleotides
Psest_2382: Psest_2382 - coenzyme PQQ biosynthesis probable peptidase PqqF, at 2,534,543 to 2,537,083
_2382
Psest_2383: Psest_2383 - Predicted transcriptional regulators, at 2,537,118 to 2,538,065
_2383
Psest_2384: Psest_2384 - Uncharacterized protein conserved in bacteria, at 2,538,159 to 2,538,608
_2384
Psest_2385: Psest_2385 - hypothetical protein, at 2,538,605 to 2,538,919
_2385
Position (kb)
2537
2538
2539 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2536.223 kb on - strand, within Psest_2382 at 2536.484 kb on + strand, within Psest_2382 at 2536.506 kb on + strand, within Psest_2382 at 2536.506 kb on + strand, within Psest_2382 at 2536.506 kb on + strand, within Psest_2382 at 2536.507 kb on - strand, within Psest_2382 at 2536.507 kb on - strand, within Psest_2382 at 2536.683 kb on - strand, within Psest_2382 at 2536.683 kb on - strand, within Psest_2382 at 2536.683 kb on - strand, within Psest_2382 at 2536.738 kb on + strand, within Psest_2382 at 2537.656 kb on + strand, within Psest_2383 at 2537.656 kb on + strand, within Psest_2383 at 2537.657 kb on - strand, within Psest_2383 at 2537.657 kb on - strand, within Psest_2383 at 2537.657 kb on - strand, within Psest_2383 at 2537.657 kb on - strand, within Psest_2383 at 2537.677 kb on + strand, within Psest_2383 at 2537.677 kb on + strand, within Psest_2383 at 2537.678 kb on - strand, within Psest_2383 at 2537.678 kb on - strand, within Psest_2383 at 2537.678 kb on - strand, within Psest_2383 at 2537.678 kb on - strand, within Psest_2383 at 2537.891 kb on - strand, within Psest_2383 at 2537.912 kb on + strand, within Psest_2383 at 2537.912 kb on + strand, within Psest_2383 at 2538.006 kb on + strand at 2538.006 kb on + strand at 2538.006 kb on + strand at 2538.007 kb on - strand at 2538.007 kb on - strand at 2538.007 kb on - strand at 2538.007 kb on - strand at 2538.137 kb on + strand at 2538.137 kb on + strand at 2538.138 kb on - strand at 2538.186 kb on + strand at 2538.186 kb on + strand at 2538.186 kb on + strand at 2538.186 kb on + strand at 2538.186 kb on + strand at 2538.186 kb on + strand at 2538.187 kb on - strand at 2538.187 kb on - strand at 2538.187 kb on - strand at 2538.187 kb on - strand at 2538.325 kb on + strand, within Psest_2384 at 2538.325 kb on + strand, within Psest_2384 at 2538.325 kb on + strand, within Psest_2384 at 2538.326 kb on - strand, within Psest_2384 at 2538.326 kb on - strand, within Psest_2384 at 2538.388 kb on - strand, within Psest_2384 at 2538.606 kb on + strand at 2538.606 kb on + strand at 2538.606 kb on + strand at 2538.607 kb on - strand at 2538.702 kb on + strand, within Psest_2385 at 2538.864 kb on - strand, within Psest_2385 at 2538.932 kb on + strand at 2538.932 kb on + strand at 2538.934 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 2,536,223 - Psest_2382 0.66 -1.9 2,536,484 + Psest_2382 0.76 -0.3 2,536,506 + Psest_2382 0.77 -0.6 2,536,506 + Psest_2382 0.77 -0.2 2,536,506 + Psest_2382 0.77 +0.1 2,536,507 - Psest_2382 0.77 +0.2 2,536,507 - Psest_2382 0.77 -1.4 2,536,683 - Psest_2382 0.84 +1.1 2,536,683 - Psest_2382 0.84 -1.0 2,536,683 - Psest_2382 0.84 -1.0 2,536,738 + Psest_2382 0.86 +1.4 2,537,656 + Psest_2383 0.57 +2.5 2,537,656 + Psest_2383 0.57 +2.4 2,537,657 - Psest_2383 0.57 -1.4 2,537,657 - Psest_2383 0.57 +1.7 2,537,657 - Psest_2383 0.57 +1.2 2,537,657 - Psest_2383 0.57 +2.4 2,537,677 + Psest_2383 0.59 +0.7 2,537,677 + Psest_2383 0.59 +4.0 2,537,678 - Psest_2383 0.59 -0.1 2,537,678 - Psest_2383 0.59 +2.5 2,537,678 - Psest_2383 0.59 +2.3 2,537,678 - Psest_2383 0.59 +1.8 2,537,891 - Psest_2383 0.82 +2.1 2,537,912 + Psest_2383 0.84 +2.0 2,537,912 + Psest_2383 0.84 +1.0 2,538,006 + +3.0 2,538,006 + +0.7 2,538,006 + +1.6 2,538,007 - +4.5 2,538,007 - +2.5 2,538,007 - +0.6 2,538,007 - +2.5 2,538,137 + -0.2 2,538,137 + +1.7 2,538,138 - -1.8 2,538,186 + +0.1 2,538,186 + -1.5 2,538,186 + -1.5 2,538,186 + -0.7 2,538,186 + +0.4 2,538,186 + +0.2 2,538,187 - +0.8 2,538,187 - -1.6 2,538,187 - -0.6 2,538,187 - +0.2 2,538,325 + Psest_2384 0.37 -0.4 2,538,325 + Psest_2384 0.37 -3.0 2,538,325 + Psest_2384 0.37 +2.6 2,538,326 - Psest_2384 0.37 -0.4 2,538,326 - Psest_2384 0.37 -0.9 2,538,388 - Psest_2384 0.51 +2.4 2,538,606 + -1.1 2,538,606 + -0.2 2,538,606 + +0.6 2,538,607 - +0.8 2,538,702 + Psest_2385 0.31 +2.0 2,538,864 - Psest_2385 0.82 +1.6 2,538,932 + -0.5 2,538,932 + +0.1 2,538,934 + -1.4
Or see this region's nucleotide sequence