Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3291 and Psest_3292 are separated by 8 nucleotides Psest_3292 and Psest_3293 are separated by 136 nucleotides Psest_3293 and Psest_3294 are separated by 11 nucleotides
Psest_3291: Psest_3291 - Lipid A core - O-antigen ligase and related enzymes, at 3,456,711 to 3,458,168
_3291
Psest_3292: Psest_3292 - hypothetical protein, at 3,458,177 to 3,458,914
_3292
Psest_3293: Psest_3293 - sulfate adenylyltransferase, large subunit, at 3,459,051 to 3,460,949
_3293
Psest_3294: Psest_3294 - sulfate adenylyltransferase, small subunit, at 3,460,961 to 3,461,878
_3294
Position (kb)
3459
3460
3461 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3458.122 kb on + strand at 3458.122 kb on + strand at 3458.122 kb on + strand at 3458.175 kb on - strand at 3458.175 kb on - strand at 3458.175 kb on - strand at 3458.176 kb on + strand at 3458.176 kb on + strand at 3458.176 kb on + strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.322 kb on + strand, within Psest_3292 at 3458.325 kb on + strand, within Psest_3292 at 3458.337 kb on + strand, within Psest_3292 at 3458.338 kb on - strand, within Psest_3292 at 3458.441 kb on + strand, within Psest_3292 at 3458.442 kb on - strand, within Psest_3292 at 3458.759 kb on + strand, within Psest_3292 at 3458.759 kb on + strand, within Psest_3292 at 3458.760 kb on - strand, within Psest_3292 at 3458.798 kb on + strand, within Psest_3292 at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.912 kb on + strand at 3458.912 kb on + strand at 3458.913 kb on - strand at 3459.052 kb on + strand at 3459.052 kb on + strand at 3459.053 kb on - strand at 3459.053 kb on - strand at 3459.053 kb on - strand at 3459.073 kb on - strand at 3459.073 kb on - strand at 3459.073 kb on - strand at 3459.073 kb on - strand at 3459.251 kb on - strand, within Psest_3293 at 3460.963 kb on - strand at 3460.963 kb on - strand at 3460.963 kb on - strand at 3460.963 kb on - strand at 3461.936 kb on - strand at 3461.936 kb on - strand at 3461.946 kb on + strand at 3461.947 kb on - strand at 3461.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 3,458,122 + +0.3 3,458,122 + -1.3 3,458,122 + -0.4 3,458,175 - -1.9 3,458,175 - -1.1 3,458,175 - +0.1 3,458,176 + -0.3 3,458,176 + +0.2 3,458,176 + -1.6 3,458,177 - -1.5 3,458,177 - -1.8 3,458,177 - -0.5 3,458,177 - -1.2 3,458,177 - -0.6 3,458,177 - +0.3 3,458,322 + Psest_3292 0.20 -0.5 3,458,325 + Psest_3292 0.20 -1.3 3,458,337 + Psest_3292 0.22 -0.9 3,458,338 - Psest_3292 0.22 -1.5 3,458,441 + Psest_3292 0.36 +0.8 3,458,442 - Psest_3292 0.36 -0.5 3,458,759 + Psest_3292 0.79 -0.2 3,458,759 + Psest_3292 0.79 +0.6 3,458,760 - Psest_3292 0.79 -1.0 3,458,798 + Psest_3292 0.84 -0.6 3,458,883 + -0.2 3,458,883 + -1.1 3,458,883 + -0.8 3,458,883 + +1.2 3,458,883 + +0.5 3,458,883 + -0.6 3,458,883 + +2.1 3,458,883 + -0.3 3,458,883 + -1.3 3,458,883 + +1.3 3,458,883 + -0.1 3,458,883 + +0.4 3,458,883 + +1.1 3,458,883 + +1.3 3,458,883 + +0.9 3,458,884 - -0.4 3,458,884 - -0.7 3,458,884 - -1.1 3,458,884 - +1.5 3,458,884 - +0.9 3,458,884 - +0.3 3,458,884 - +0.2 3,458,884 - +0.3 3,458,912 + +0.0 3,458,912 + -0.6 3,458,913 - -0.2 3,459,052 + -0.5 3,459,052 + -1.8 3,459,053 - -0.1 3,459,053 - -0.1 3,459,053 - -1.6 3,459,073 - +0.9 3,459,073 - +1.3 3,459,073 - -0.2 3,459,073 - -0.8 3,459,251 - Psest_3293 0.11 -0.1 3,460,963 - +1.2 3,460,963 - +0.1 3,460,963 - -0.4 3,460,963 - -2.3 3,461,936 - -0.1 3,461,936 - -1.2 3,461,946 + +1.5 3,461,947 - +0.3 3,461,947 - -0.4
Or see this region's nucleotide sequence