Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1807

Experiment: Phosphomycin 0.012 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.012 mg/ml
1,904,421	+		Psest_1806	0.47	-0.6
1,904,421	+		Psest_1806	0.47	+0.8
1,904,421	+		Psest_1806	0.47	+0.6
1,904,421	+		Psest_1806	0.47	+0.2
1,904,594	+		Psest_1806	0.61	+1.4
1,904,595	-		Psest_1806	0.61	+1.0
1,904,662	+		Psest_1806	0.66	+0.8
1,904,662	+		Psest_1806	0.66	-0.7
1,904,797	+		Psest_1806	0.76	+0.3
1,904,848	+		Psest_1806	0.80	+0.7
1,904,848	+		Psest_1806	0.80	+0.3
1,904,848	+		Psest_1806	0.80	+1.1
1,904,848	+		Psest_1806	0.80	+0.7
1,904,848	+		Psest_1806	0.80	+2.4
1,904,848	+		Psest_1806	0.80	+0.6
1,904,848	+		Psest_1806	0.80	-0.3
1,904,848	+		Psest_1806	0.80	-0.3
1,904,848	+		Psest_1806	0.80	+2.5
1,904,848	+		Psest_1806	0.80	+1.0
1,904,849	-		Psest_1806	0.80	+0.4
1,904,849	-		Psest_1806	0.80	+1.3
1,904,849	-		Psest_1806	0.80	+0.9
1,904,849	-		Psest_1806	0.80	+0.3
1,904,849	-		Psest_1806	0.80	+2.0
1,904,849	-		Psest_1806	0.80	+0.4
1,904,849	-		Psest_1806	0.80	+1.0
1,904,849	-		Psest_1806	0.80	-2.9
1,904,849	-		Psest_1806	0.80	+2.6
1,904,849	-		Psest_1806	0.80	+1.3
1,904,849	-		Psest_1806	0.80	+0.6
1,904,850	+		Psest_1806	0.81	+0.5
1,904,850	+		Psest_1806	0.81	+0.6
1,904,850	+		Psest_1806	0.81	+0.1
1,904,851	-		Psest_1806	0.81	+0.2
1,905,032	-				+1.1
1,905,047	-				+1.4
1,905,096	+				+4.8
1,905,097	-				-1.9
1,905,141	+				+0.6
1,905,141	+				+0.1
1,905,141	+				+2.5
1,905,141	+				+0.6
1,905,141	+				-0.3
1,905,141	+				+1.2
1,905,142	-				+1.2
1,905,142	-				+0.5
1,905,142	-				+1.6
1,905,142	-				-0.1
1,905,142	-				+0.9
1,905,142	-				+0.2
1,905,162	+				-1.4
1,905,196	-				+1.6
1,905,217	+				-0.9
1,905,217	+				-0.3
1,905,218	-				-0.1
1,905,467	+				+1.3
1,905,468	-				-1.6
1,905,468	-				+1.2
1,905,500	-		Psest_1807	0.11	+2.0
1,905,520	+		Psest_1807	0.13	+2.3
1,905,521	-		Psest_1807	0.13	-1.6
1,905,523	+		Psest_1807	0.13	+1.0
1,905,523	+		Psest_1807	0.13	+1.0
1,905,523	+		Psest_1807	0.13	+0.1
1,905,523	+		Psest_1807	0.13	-1.5
1,905,524	-		Psest_1807	0.13	-1.8
1,905,524	-		Psest_1807	0.13	-0.4
1,905,542	+		Psest_1807	0.14	+0.1
1,905,543	-		Psest_1807	0.14	+0.2
1,905,588	+		Psest_1807	0.18	+0.1
1,905,588	+		Psest_1807	0.18	+0.2
1,905,588	+		Psest_1807	0.18	+1.5
1,905,589	-		Psest_1807	0.18	-1.4
1,905,589	-		Psest_1807	0.18	+0.1
1,905,593	-		Psest_1807	0.18	-2.3
1,905,593	-		Psest_1807	0.18	-0.0
1,905,593	-		Psest_1807	0.18	+2.4
1,905,593	-		Psest_1807	0.18	-0.3
1,905,593	-		Psest_1807	0.18	-0.5
1,905,698	+		Psest_1807	0.27	+0.5
1,905,803	-		Psest_1807	0.35	+0.0
1,905,803	-		Psest_1807	0.35	-1.0
1,905,803	-		Psest_1807	0.35	+1.8
1,905,823	+		Psest_1807	0.36	-2.3
1,905,916	-		Psest_1807	0.44	-0.2
1,905,936	+		Psest_1807	0.45	+0.3
1,905,976	+		Psest_1807	0.48	-0.2
1,905,977	-		Psest_1807	0.48	-2.2
1,905,977	-		Psest_1807	0.48	+0.2
1,905,977	-		Psest_1807	0.48	-0.4
1,905,977	-		Psest_1807	0.48	+0.0
1,906,206	-		Psest_1807	0.66	-0.2
1,906,243	+		Psest_1807	0.69	-0.3
1,906,243	+		Psest_1807	0.69	-0.8
1,906,244	-		Psest_1807	0.69	-0.3
1,906,382	+		Psest_1807	0.80	-0.2
1,906,412	+		Psest_1807	0.82	+1.3
1,906,413	-		Psest_1807	0.82	-0.2
1,906,413	-		Psest_1807	0.82	-0.0
1,906,547	+				-0.6
1,906,547	+				+0.5
1,906,548	-				+0.1
1,906,692	+				+0.3
1,906,834	+				+0.0
1,906,834	+				-2.0
1,906,834	+				-0.9
1,906,835	-				+0.1
1,906,835	-				+1.4
1,906,835	-				-0.3
1,906,835	-				-0.4
1,906,916	+				-1.4
1,907,007	+		Psest_1808	0.15	-1.1
1,907,007	+		Psest_1808	0.15	-0.8
1,907,040	+		Psest_1808	0.17	+0.0
1,907,041	-		Psest_1808	0.17	+0.8
1,907,041	-		Psest_1808	0.17	-0.5
1,907,041	-		Psest_1808	0.17	-0.3
1,907,065	+		Psest_1808	0.19	-0.8
1,907,065	+		Psest_1808	0.19	+0.3
1,907,066	-		Psest_1808	0.19	-1.0
1,907,066	-		Psest_1808	0.19	-0.5
1,907,066	-		Psest_1808	0.19	+2.8
1,907,072	+		Psest_1808	0.19	+0.4
1,907,098	+		Psest_1808	0.21	+0.1
1,907,098	+		Psest_1808	0.21	-0.4
1,907,099	-		Psest_1808	0.21	-1.0
1,907,172	+		Psest_1808	0.26	+0.9
1,907,173	-		Psest_1808	0.26	+4.1
1,907,243	+		Psest_1808	0.30	+0.0
1,907,244	-		Psest_1808	0.31	-1.4
1,907,259	+		Psest_1808	0.31	+0.6
1,907,260	-		Psest_1808	0.32	+0.5
1,907,492	-		Psest_1808	0.46	-0.9
1,907,536	-		Psest_1808	0.49	+0.5
1,907,576	+		Psest_1808	0.52	-0.7
1,907,623	+		Psest_1808	0.55	+0.3
1,907,623	+		Psest_1808	0.55	-0.5
1,907,624	-		Psest_1808	0.55	-2.2
1,907,624	-		Psest_1808	0.55	+0.0
1,907,624	-		Psest_1808	0.55	+1.6