Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1433 and Psest_1434 are separated by 248 nucleotides Psest_1434 and Psest_1435 are separated by 62 nucleotides
Psest_1433: Psest_1433 - hypothetical protein, at 1,543,509 to 1,545,029
_1433
Psest_1434: Psest_1434 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 1,545,278 to 1,546,288
_1434
Psest_1435: Psest_1435 - Predicted SAM-dependent methyltransferases, at 1,546,351 to 1,547,289
_1435
Position (kb)
1545
1546
1547 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1544.278 kb on + strand, within Psest_1433 at 1544.279 kb on - strand, within Psest_1433 at 1544.279 kb on - strand, within Psest_1433 at 1544.279 kb on - strand, within Psest_1433 at 1544.279 kb on - strand, within Psest_1433 at 1544.314 kb on + strand, within Psest_1433 at 1544.314 kb on + strand, within Psest_1433 at 1544.315 kb on - strand, within Psest_1433 at 1544.356 kb on + strand, within Psest_1433 at 1544.356 kb on + strand, within Psest_1433 at 1544.357 kb on - strand, within Psest_1433 at 1544.357 kb on - strand, within Psest_1433 at 1544.357 kb on - strand, within Psest_1433 at 1544.533 kb on + strand, within Psest_1433 at 1544.533 kb on + strand, within Psest_1433 at 1544.534 kb on - strand, within Psest_1433 at 1544.758 kb on + strand, within Psest_1433 at 1544.818 kb on + strand, within Psest_1433 at 1544.819 kb on - strand, within Psest_1433 at 1544.836 kb on + strand, within Psest_1433 at 1544.836 kb on + strand, within Psest_1433 at 1544.836 kb on + strand, within Psest_1433 at 1544.836 kb on + strand, within Psest_1433 at 1544.836 kb on + strand, within Psest_1433 at 1544.836 kb on + strand, within Psest_1433 at 1544.836 kb on + strand, within Psest_1433 at 1544.837 kb on - strand, within Psest_1433 at 1544.837 kb on - strand, within Psest_1433 at 1544.837 kb on - strand, within Psest_1433 at 1544.837 kb on - strand, within Psest_1433 at 1545.088 kb on + strand at 1545.116 kb on - strand at 1545.116 kb on - strand at 1545.124 kb on + strand at 1545.124 kb on + strand at 1545.124 kb on + strand at 1545.124 kb on + strand at 1545.124 kb on + strand at 1545.124 kb on + strand at 1545.125 kb on - strand at 1545.160 kb on - strand at 1545.160 kb on - strand at 1545.160 kb on - strand at 1545.259 kb on - strand at 1545.259 kb on - strand at 1545.404 kb on + strand, within Psest_1434 at 1545.404 kb on + strand, within Psest_1434 at 1545.404 kb on + strand, within Psest_1434 at 1545.405 kb on - strand, within Psest_1434 at 1545.674 kb on + strand, within Psest_1434 at 1545.909 kb on - strand, within Psest_1434 at 1546.039 kb on + strand, within Psest_1434 at 1546.039 kb on + strand, within Psest_1434 at 1546.039 kb on + strand, within Psest_1434 at 1546.039 kb on + strand, within Psest_1434 at 1546.040 kb on - strand, within Psest_1434 at 1546.040 kb on - strand, within Psest_1434 at 1546.316 kb on - strand at 1546.316 kb on - strand at 1546.628 kb on - strand, within Psest_1435 at 1546.628 kb on - strand, within Psest_1435 at 1546.705 kb on + strand, within Psest_1435 at 1546.705 kb on + strand, within Psest_1435 at 1546.705 kb on + strand, within Psest_1435 at 1546.705 kb on + strand, within Psest_1435 at 1546.706 kb on - strand, within Psest_1435 at 1546.706 kb on - strand, within Psest_1435 at 1546.706 kb on - strand, within Psest_1435 at 1546.706 kb on - strand, within Psest_1435 at 1546.819 kb on + strand, within Psest_1435 at 1546.819 kb on + strand, within Psest_1435 at 1546.820 kb on - strand, within Psest_1435 at 1546.820 kb on - strand, within Psest_1435 at 1547.008 kb on + strand, within Psest_1435 at 1547.009 kb on - strand, within Psest_1435
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 1,544,278 + Psest_1433 0.51 +1.2 1,544,279 - Psest_1433 0.51 +0.5 1,544,279 - Psest_1433 0.51 +0.4 1,544,279 - Psest_1433 0.51 -0.5 1,544,279 - Psest_1433 0.51 -0.5 1,544,314 + Psest_1433 0.53 +0.9 1,544,314 + Psest_1433 0.53 +1.4 1,544,315 - Psest_1433 0.53 +0.1 1,544,356 + Psest_1433 0.56 -0.7 1,544,356 + Psest_1433 0.56 -0.1 1,544,357 - Psest_1433 0.56 +0.5 1,544,357 - Psest_1433 0.56 +0.3 1,544,357 - Psest_1433 0.56 -0.8 1,544,533 + Psest_1433 0.67 -0.3 1,544,533 + Psest_1433 0.67 -0.7 1,544,534 - Psest_1433 0.67 +1.8 1,544,758 + Psest_1433 0.82 +1.6 1,544,818 + Psest_1433 0.86 -0.2 1,544,819 - Psest_1433 0.86 -0.1 1,544,836 + Psest_1433 0.87 +0.3 1,544,836 + Psest_1433 0.87 -1.3 1,544,836 + Psest_1433 0.87 +1.2 1,544,836 + Psest_1433 0.87 -1.4 1,544,836 + Psest_1433 0.87 +0.3 1,544,836 + Psest_1433 0.87 +1.8 1,544,836 + Psest_1433 0.87 +0.4 1,544,837 - Psest_1433 0.87 +0.6 1,544,837 - Psest_1433 0.87 -2.5 1,544,837 - Psest_1433 0.87 +1.0 1,544,837 - Psest_1433 0.87 -1.1 1,545,088 + +0.2 1,545,116 - +0.5 1,545,116 - +1.4 1,545,124 + +0.1 1,545,124 + -1.0 1,545,124 + +0.6 1,545,124 + -0.5 1,545,124 + +0.2 1,545,124 + -1.8 1,545,125 - +0.4 1,545,160 - +2.3 1,545,160 - +1.6 1,545,160 - +0.2 1,545,259 - +0.1 1,545,259 - -0.4 1,545,404 + Psest_1434 0.12 +0.6 1,545,404 + Psest_1434 0.12 -0.9 1,545,404 + Psest_1434 0.12 -0.3 1,545,405 - Psest_1434 0.13 -2.1 1,545,674 + Psest_1434 0.39 -1.9 1,545,909 - Psest_1434 0.62 +0.8 1,546,039 + Psest_1434 0.75 -0.2 1,546,039 + Psest_1434 0.75 +0.8 1,546,039 + Psest_1434 0.75 -0.5 1,546,039 + Psest_1434 0.75 +0.5 1,546,040 - Psest_1434 0.75 +1.7 1,546,040 - Psest_1434 0.75 -0.4 1,546,316 - -1.1 1,546,316 - -0.5 1,546,628 - Psest_1435 0.29 -1.8 1,546,628 - Psest_1435 0.29 +0.9 1,546,705 + Psest_1435 0.38 +0.8 1,546,705 + Psest_1435 0.38 +0.2 1,546,705 + Psest_1435 0.38 +0.7 1,546,705 + Psest_1435 0.38 +0.5 1,546,706 - Psest_1435 0.38 +2.0 1,546,706 - Psest_1435 0.38 +0.1 1,546,706 - Psest_1435 0.38 +0.8 1,546,706 - Psest_1435 0.38 -0.1 1,546,819 + Psest_1435 0.50 -0.0 1,546,819 + Psest_1435 0.50 -0.0 1,546,820 - Psest_1435 0.50 -0.5 1,546,820 - Psest_1435 0.50 -1.2 1,547,008 + Psest_1435 0.70 -1.1 1,547,009 - Psest_1435 0.70 +0.1
Or see this region's nucleotide sequence