Experiment: Phosphomycin 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1327 and Psest_1328 are separated by 151 nucleotides Psest_1328 and Psest_1329 are separated by 1 nucleotides Psest_1329 and Psest_1330 overlap by 4 nucleotides
Psest_1327: Psest_1327 - Superfamily II DNA/RNA helicases, SNF2 family, at 1,428,699 to 1,431,548
_1327
Psest_1328: Psest_1328 - hypothetical protein, at 1,431,700 to 1,431,996
_1328
Psest_1329: Psest_1329 - Alkylated DNA repair protein, at 1,431,998 to 1,432,615
_1329
Psest_1330: Psest_1330 - hypothetical protein, at 1,432,612 to 1,432,773
_1330
Position (kb)
1431
1432 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1430.777 kb on + strand, within Psest_1327 at 1430.777 kb on + strand, within Psest_1327 at 1431.161 kb on - strand, within Psest_1327 at 1431.295 kb on + strand at 1431.535 kb on + strand at 1431.535 kb on + strand at 1431.535 kb on + strand at 1431.535 kb on + strand at 1431.535 kb on + strand at 1431.535 kb on + strand at 1431.536 kb on - strand at 1431.536 kb on - strand at 1431.536 kb on - strand at 1431.639 kb on - strand at 1431.639 kb on - strand at 1431.682 kb on + strand at 1431.685 kb on - strand at 1431.685 kb on - strand at 1431.726 kb on - strand at 1431.726 kb on - strand at 1432.151 kb on + strand, within Psest_1329 at 1432.151 kb on + strand, within Psest_1329 at 1432.151 kb on + strand, within Psest_1329 at 1432.151 kb on + strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.217 kb on + strand, within Psest_1329 at 1432.477 kb on - strand, within Psest_1329 at 1432.477 kb on - strand, within Psest_1329 at 1432.477 kb on - strand, within Psest_1329 at 1432.799 kb on + strand at 1432.800 kb on - strand at 1432.800 kb on - strand at 1432.823 kb on + strand at 1432.824 kb on - strand at 1432.824 kb on - strand at 1432.867 kb on + strand at 1432.867 kb on + strand at 1432.867 kb on + strand at 1432.867 kb on + strand at 1432.870 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.012 mg/ml remove 1,430,777 + Psest_1327 0.73 +1.3 1,430,777 + Psest_1327 0.73 +0.1 1,431,161 - Psest_1327 0.86 -0.6 1,431,295 + +0.2 1,431,535 + +0.8 1,431,535 + +2.4 1,431,535 + +0.9 1,431,535 + +1.5 1,431,535 + -0.1 1,431,535 + +3.4 1,431,536 - +0.2 1,431,536 - +0.5 1,431,536 - -0.6 1,431,639 - +0.6 1,431,639 - -0.6 1,431,682 + -0.1 1,431,685 - +1.3 1,431,685 - -0.3 1,431,726 - -1.3 1,431,726 - +2.0 1,432,151 + Psest_1329 0.25 -1.0 1,432,151 + Psest_1329 0.25 -0.3 1,432,151 + Psest_1329 0.25 -0.9 1,432,151 + Psest_1329 0.25 +0.4 1,432,152 - Psest_1329 0.25 +0.3 1,432,152 - Psest_1329 0.25 +0.1 1,432,152 - Psest_1329 0.25 +1.1 1,432,152 - Psest_1329 0.25 -0.8 1,432,152 - Psest_1329 0.25 -1.7 1,432,152 - Psest_1329 0.25 +2.0 1,432,152 - Psest_1329 0.25 -1.9 1,432,152 - Psest_1329 0.25 -1.3 1,432,152 - Psest_1329 0.25 +0.1 1,432,217 + Psest_1329 0.35 -1.2 1,432,477 - Psest_1329 0.78 -0.9 1,432,477 - Psest_1329 0.78 +0.4 1,432,477 - Psest_1329 0.78 -0.9 1,432,799 + +0.1 1,432,800 - -0.3 1,432,800 - -0.1 1,432,823 + -0.8 1,432,824 - -0.9 1,432,824 - -1.3 1,432,867 + +0.7 1,432,867 + +1.2 1,432,867 + -2.5 1,432,867 + +3.1 1,432,870 - +1.8
Or see this region's nucleotide sequence