Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3172

Experiment: benzoic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.4 mg/ml
3,342,730	-		Psest_3171	0.63	-2.6
3,342,772	+		Psest_3171	0.66	-0.5
3,342,772	+		Psest_3171	0.66	+1.2
3,342,777	+		Psest_3171	0.66	+0.7
3,342,777	+		Psest_3171	0.66	-0.9
3,342,791	+		Psest_3171	0.67	+0.5
3,342,845	+		Psest_3171	0.71	-1.1
3,342,845	+		Psest_3171	0.71	-1.3
3,342,846	-		Psest_3171	0.71	-0.4
3,342,846	-		Psest_3171	0.71	-0.6
3,343,109	+		Psest_3171	0.90	-3.4
3,343,109	+		Psest_3171	0.90	+0.3
3,343,109	+		Psest_3171	0.90	-0.7
3,343,110	-		Psest_3171	0.90	+0.1
3,343,110	-		Psest_3171	0.90	-0.6
3,343,110	-		Psest_3171	0.90	+0.5
3,343,187	+				-1.1
3,343,187	+				+0.0
3,343,187	+				-0.4
3,343,188	-				-0.6
3,343,188	-				-1.1
3,343,206	+				-0.3
3,343,206	+				+0.1
3,343,207	-				-1.8
3,343,207	-				+0.2
3,343,287	+				-1.9
3,343,287	+				+0.4
3,343,288	-				-2.4
3,343,411	-				-2.1
3,343,418	+				-0.1
3,343,552	+				-0.3
3,343,604	+				+0.1
3,343,605	-				-1.0
3,343,655	+		Psest_3172	0.15	-1.2
3,343,655	+		Psest_3172	0.15	-1.5
3,343,655	+		Psest_3172	0.15	-0.1
3,343,678	+		Psest_3172	0.17	-2.9
3,343,678	+		Psest_3172	0.17	-1.3
3,343,678	+		Psest_3172	0.17	+0.4
3,344,033	-		Psest_3172	0.54	-2.0
3,344,179	-		Psest_3172	0.69	-1.0
3,344,255	+		Psest_3172	0.77	-2.9
3,344,286	+		Psest_3172	0.81	-0.3
3,344,287	-		Psest_3172	0.81	-0.9
3,344,287	-		Psest_3172	0.81	-1.1
3,344,287	-		Psest_3172	0.81	-0.6
3,344,298	+		Psest_3172	0.82	-0.4
3,344,298	+		Psest_3172	0.82	-1.0
3,344,299	-		Psest_3172	0.82	-1.9
3,344,473	-				-1.6
3,344,541	-				-0.4
3,344,572	+				+0.1
3,344,578	+				+0.3
3,344,578	+				+1.8
3,344,578	+				+0.1
3,344,579	-				-0.1
3,344,607	+				+0.4
3,344,607	+				-0.6
3,344,607	+				-0.2
3,344,607	+				-1.1
3,344,607	+				+1.4
3,344,608	-				-0.9
3,344,608	-				+1.0
3,344,608	-				+2.0
3,344,608	-				+1.1
3,344,608	-				+0.8
3,344,608	-				-0.4
3,344,688	+		Psest_3173	0.10	+0.8
3,344,689	-		Psest_3173	0.10	+2.4
3,344,871	+		Psest_3173	0.33	-1.1
3,344,872	-		Psest_3173	0.34	-0.9
3,344,898	-		Psest_3173	0.37	-0.3
3,345,039	+		Psest_3173	0.55	+0.4
3,345,132	+		Psest_3173	0.67	-1.3
3,345,133	-		Psest_3173	0.67	+1.3
3,345,133	-		Psest_3173	0.67	+0.2
3,345,133	-		Psest_3173	0.67	-0.1
3,345,210	+		Psest_3173	0.77	+3.6
3,345,211	-		Psest_3173	0.77	-0.1
3,345,229	-		Psest_3173	0.79	+1.4
3,345,229	-		Psest_3173	0.79	+0.8
3,345,229	-		Psest_3173	0.79	+0.0