Experiment: benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1749 and Psest_1750 are separated by 3 nucleotides Psest_1750 and Psest_1751 are separated by 134 nucleotides Psest_1751 and Psest_1752 overlap by 20 nucleotides Psest_1752 and Psest_1753 overlap by 4 nucleotides
Psest_1749: Psest_1749 - Chemotaxis signal transduction protein, at 1,854,105 to 1,854,584
_1749
Psest_1750: Psest_1750 - Protein of unknown function (DUF2802)., at 1,854,588 to 1,855,001
_1750
Psest_1751: Psest_1751 - Rhodanese-related sulfurtransferase, at 1,855,136 to 1,855,579
_1751
Psest_1752: Psest_1752 - Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB, at 1,855,560 to 1,855,892
_1752
Psest_1753: Psest_1753 - Flagellar hook-length control protein FliK., at 1,855,889 to 1,857,418
_1753
Position (kb)
1855
1856 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1854.180 kb on + strand, within Psest_1749 at 1854.193 kb on + strand, within Psest_1749 at 1854.193 kb on + strand, within Psest_1749 at 1854.194 kb on - strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.255 kb on + strand, within Psest_1749 at 1854.256 kb on - strand, within Psest_1749 at 1854.256 kb on - strand, within Psest_1749 at 1854.256 kb on - strand, within Psest_1749 at 1854.256 kb on - strand, within Psest_1749 at 1854.256 kb on - strand, within Psest_1749 at 1854.256 kb on - strand, within Psest_1749 at 1854.256 kb on - strand, within Psest_1749 at 1854.256 kb on - strand, within Psest_1749 at 1854.423 kb on + strand, within Psest_1749 at 1854.585 kb on + strand at 1854.585 kb on + strand at 1854.585 kb on + strand at 1854.585 kb on + strand at 1854.586 kb on - strand at 1854.586 kb on - strand at 1854.763 kb on - strand, within Psest_1750 at 1854.812 kb on + strand, within Psest_1750 at 1854.812 kb on + strand, within Psest_1750 at 1854.867 kb on - strand, within Psest_1750 at 1854.911 kb on + strand, within Psest_1750 at 1855.186 kb on - strand, within Psest_1751 at 1855.403 kb on + strand, within Psest_1751 at 1855.403 kb on + strand, within Psest_1751 at 1855.403 kb on + strand, within Psest_1751 at 1855.404 kb on - strand, within Psest_1751 at 1855.404 kb on - strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.420 kb on - strand, within Psest_1751 at 1855.420 kb on - strand, within Psest_1751 at 1855.420 kb on - strand, within Psest_1751 at 1855.467 kb on - strand, within Psest_1751 at 1855.481 kb on + strand, within Psest_1751 at 1855.482 kb on - strand, within Psest_1751 at 1855.496 kb on + strand, within Psest_1751 at 1855.497 kb on - strand, within Psest_1751 at 1855.512 kb on + strand, within Psest_1751 at 1855.513 kb on - strand, within Psest_1751 at 1855.652 kb on - strand, within Psest_1752 at 1855.714 kb on - strand, within Psest_1752 at 1856.263 kb on + strand, within Psest_1753 at 1856.264 kb on - strand, within Psest_1753
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.4 mg/ml remove 1,854,180 + Psest_1749 0.16 +0.7 1,854,193 + Psest_1749 0.18 -0.4 1,854,193 + Psest_1749 0.18 +0.2 1,854,194 - Psest_1749 0.19 +1.7 1,854,255 + Psest_1749 0.31 -0.2 1,854,255 + Psest_1749 0.31 +0.9 1,854,255 + Psest_1749 0.31 +0.4 1,854,255 + Psest_1749 0.31 -0.4 1,854,255 + Psest_1749 0.31 +0.2 1,854,255 + Psest_1749 0.31 +0.5 1,854,255 + Psest_1749 0.31 -0.2 1,854,255 + Psest_1749 0.31 -0.1 1,854,255 + Psest_1749 0.31 -0.4 1,854,255 + Psest_1749 0.31 +0.6 1,854,256 - Psest_1749 0.31 +1.6 1,854,256 - Psest_1749 0.31 +0.0 1,854,256 - Psest_1749 0.31 +1.4 1,854,256 - Psest_1749 0.31 +0.8 1,854,256 - Psest_1749 0.31 -1.9 1,854,256 - Psest_1749 0.31 -0.1 1,854,256 - Psest_1749 0.31 +0.5 1,854,256 - Psest_1749 0.31 -0.6 1,854,423 + Psest_1749 0.66 +1.1 1,854,585 + +0.5 1,854,585 + +1.1 1,854,585 + +0.3 1,854,585 + +0.5 1,854,586 - -0.0 1,854,586 - -0.6 1,854,763 - Psest_1750 0.42 +0.1 1,854,812 + Psest_1750 0.54 -0.2 1,854,812 + Psest_1750 0.54 -0.1 1,854,867 - Psest_1750 0.67 -0.5 1,854,911 + Psest_1750 0.78 +0.6 1,855,186 - Psest_1751 0.11 +1.0 1,855,403 + Psest_1751 0.60 +1.8 1,855,403 + Psest_1751 0.60 -1.2 1,855,403 + Psest_1751 0.60 -0.0 1,855,404 - Psest_1751 0.60 +1.6 1,855,404 - Psest_1751 0.60 +1.0 1,855,419 + Psest_1751 0.64 +0.1 1,855,419 + Psest_1751 0.64 -0.3 1,855,419 + Psest_1751 0.64 +2.9 1,855,419 + Psest_1751 0.64 +1.3 1,855,419 + Psest_1751 0.64 -0.0 1,855,419 + Psest_1751 0.64 -0.5 1,855,420 - Psest_1751 0.64 +2.2 1,855,420 - Psest_1751 0.64 +0.1 1,855,420 - Psest_1751 0.64 +1.4 1,855,467 - Psest_1751 0.75 +2.6 1,855,481 + Psest_1751 0.78 +0.4 1,855,482 - Psest_1751 0.78 +1.0 1,855,496 + Psest_1751 0.81 +2.5 1,855,497 - Psest_1751 0.81 +0.1 1,855,512 + Psest_1751 0.85 -0.6 1,855,513 - Psest_1751 0.85 +0.1 1,855,652 - Psest_1752 0.28 -0.2 1,855,714 - Psest_1752 0.46 +3.2 1,856,263 + Psest_1753 0.24 +0.2 1,856,264 - Psest_1753 0.25 -0.4
Or see this region's nucleotide sequence