Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1074 and Psest_1075 are separated by 409 nucleotides Psest_1075 and Psest_1076 are separated by 77 nucleotides Psest_1076 and Psest_1077 are separated by 257 nucleotides Psest_1077 and Psest_1078 are separated by 4 nucleotides
Psest_1074: Psest_1074 - TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component, at 1,162,493 to 1,163,578
_1074
Psest_1075: Psest_1075 - Predicted transcriptional regulators, at 1,163,988 to 1,164,386
_1075
Psest_1076: Psest_1076 - acetyl-CoA acetyltransferases, at 1,164,464 to 1,165,645
_1076
Psest_1077: Psest_1077 - acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) , at 1,165,903 to 1,166,532
_1077
Psest_1078: Psest_1078 - acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) , at 1,166,537 to 1,167,232
_1078
Position (kb)
1164
1165
1166 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1163.969 kb on + strand at 1163.970 kb on - strand at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.313 kb on + strand, within Psest_1075 at 1164.314 kb on - strand, within Psest_1075 at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.366 kb on - strand at 1164.366 kb on - strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.371 kb on - strand at 1164.488 kb on + strand at 1165.143 kb on + strand, within Psest_1076 at 1165.143 kb on + strand, within Psest_1076 at 1165.144 kb on - strand, within Psest_1076 at 1165.182 kb on + strand, within Psest_1076 at 1165.278 kb on + strand, within Psest_1076 at 1165.278 kb on + strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.625 kb on + strand at 1165.786 kb on + strand at 1165.786 kb on + strand at 1165.787 kb on - strand at 1165.788 kb on + strand at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.471 kb on + strand at 1166.471 kb on + strand at 1166.471 kb on + strand at 1166.472 kb on - strand at 1166.472 kb on - strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 1,163,969 + -0.1 1,163,970 - -0.4 1,164,262 + Psest_1075 0.69 -1.6 1,164,262 + Psest_1075 0.69 -1.1 1,164,262 + Psest_1075 0.69 -0.9 1,164,262 + Psest_1075 0.69 -0.2 1,164,263 - Psest_1075 0.69 +1.1 1,164,263 - Psest_1075 0.69 -0.2 1,164,263 - Psest_1075 0.69 +1.4 1,164,263 - Psest_1075 0.69 +0.1 1,164,263 - Psest_1075 0.69 -1.1 1,164,263 - Psest_1075 0.69 -0.5 1,164,263 - Psest_1075 0.69 -0.6 1,164,313 + Psest_1075 0.81 -0.1 1,164,314 - Psest_1075 0.82 +1.3 1,164,365 + +1.0 1,164,365 + -0.5 1,164,365 + -1.1 1,164,365 + -0.5 1,164,366 - -0.4 1,164,366 - -1.8 1,164,370 + -3.3 1,164,370 + +0.3 1,164,370 + +0.4 1,164,370 + +0.4 1,164,370 + -0.9 1,164,370 + +0.2 1,164,370 + +3.3 1,164,370 + +0.2 1,164,370 + +0.4 1,164,370 + -0.7 1,164,370 + -0.3 1,164,370 + -0.8 1,164,370 + -1.8 1,164,371 - +1.4 1,164,488 + -1.2 1,165,143 + Psest_1076 0.57 -1.5 1,165,143 + Psest_1076 0.57 -2.2 1,165,144 - Psest_1076 0.58 -0.6 1,165,182 + Psest_1076 0.61 -0.5 1,165,278 + Psest_1076 0.69 -1.4 1,165,278 + Psest_1076 0.69 +0.9 1,165,279 - Psest_1076 0.69 -1.1 1,165,279 - Psest_1076 0.69 +0.2 1,165,279 - Psest_1076 0.69 -0.5 1,165,279 - Psest_1076 0.69 +3.0 1,165,279 - Psest_1076 0.69 +0.1 1,165,279 - Psest_1076 0.69 +0.4 1,165,625 + +0.1 1,165,786 + +1.5 1,165,786 + +0.3 1,165,787 - -3.1 1,165,788 + -0.7 1,166,429 + Psest_1077 0.83 -1.5 1,166,429 + Psest_1077 0.83 -2.2 1,166,429 + Psest_1077 0.83 +1.1 1,166,429 + Psest_1077 0.83 -0.6 1,166,429 + Psest_1077 0.83 -0.9 1,166,429 + Psest_1077 0.83 -0.7 1,166,429 + Psest_1077 0.83 -1.6 1,166,429 + Psest_1077 0.83 +0.8 1,166,429 + Psest_1077 0.83 +1.2 1,166,429 + Psest_1077 0.83 -1.0 1,166,429 + Psest_1077 0.83 +0.5 1,166,429 + Psest_1077 0.83 +1.1 1,166,429 + Psest_1077 0.83 +1.4 1,166,430 - Psest_1077 0.84 +0.8 1,166,430 - Psest_1077 0.84 -3.4 1,166,430 - Psest_1077 0.84 -1.1 1,166,430 - Psest_1077 0.84 +0.1 1,166,430 - Psest_1077 0.84 +0.4 1,166,430 - Psest_1077 0.84 +0.2 1,166,430 - Psest_1077 0.84 +1.9 1,166,471 + +0.6 1,166,471 + -1.4 1,166,471 + +0.2 1,166,472 - -2.0 1,166,472 - +0.1 1,166,604 + -1.1 1,166,604 + +0.0 1,166,604 + +0.2 1,166,604 + -2.7 1,166,604 + -2.0 1,166,604 + +0.5 1,166,604 + +1.3 1,166,604 + -0.1 1,166,604 + +0.6 1,166,604 + +0.6 1,166,604 + -1.6 1,166,604 + -1.8 1,166,604 + -1.0 1,166,604 + -2.4 1,166,604 + +0.1 1,166,604 + +0.6 1,166,604 + -0.7 1,166,604 + +0.2 1,166,604 + -1.2 1,166,604 + +0.4 1,166,604 + +0.8 1,166,604 + +0.4 1,166,604 + +0.0 1,166,604 + +1.6 1,166,604 + -1.2 1,166,604 + +0.6 1,166,605 - -1.3 1,166,605 - -1.8 1,166,605 - -1.5 1,166,605 - -1.7 1,166,605 - -0.3 1,166,605 - -2.7 1,166,605 - +0.6 1,166,605 - -0.2 1,166,605 - +1.0 1,166,605 - +0.8 1,166,605 - +0.1 1,166,605 - -0.9 1,166,605 - -1.5 1,166,605 - +0.1 1,166,605 - -1.0 1,166,605 - -1.4 1,166,605 - +0.3 1,166,605 - +0.0 1,166,605 - +0.4
Or see this region's nucleotide sequence