Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4271 and Psest_4272 are separated by 154 nucleotides Psest_4272 and Psest_4273 are separated by 6 nucleotides Psest_4273 and Psest_4274 are separated by 85 nucleotides Psest_4274 and Psest_4275 are separated by 111 nucleotides
Psest_4271: Psest_4271 - Predicted proline hydroxylase, at 4,461,968 to 4,462,576
_4271
Psest_4272: Psest_4272 - hypothetical protein, at 4,462,731 to 4,463,495
_4272
Psest_4273: Psest_4273 - Lysophospholipase, at 4,463,502 to 4,464,440
_4273
Psest_4274: Psest_4274 - hypothetical protein, at 4,464,526 to 4,465,095
_4274
Psest_4275: Psest_4275 - Outer membrane receptor for ferrienterochelin and colicins, at 4,465,207 to 4,467,270
_4275
Position (kb)
4463
4464
4465 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4462.609 kb on + strand at 4462.618 kb on + strand at 4462.619 kb on - strand at 4462.619 kb on - strand at 4462.630 kb on + strand at 4462.744 kb on + strand at 4462.754 kb on - strand at 4462.791 kb on + strand at 4462.792 kb on - strand at 4462.792 kb on - strand at 4462.792 kb on - strand at 4462.804 kb on - strand at 4462.804 kb on - strand at 4462.920 kb on - strand, within Psest_4272 at 4462.984 kb on + strand, within Psest_4272 at 4463.373 kb on + strand, within Psest_4272 at 4463.373 kb on + strand, within Psest_4272 at 4463.373 kb on + strand, within Psest_4272 at 4463.374 kb on - strand, within Psest_4272 at 4463.374 kb on - strand, within Psest_4272 at 4463.374 kb on - strand, within Psest_4272 at 4463.374 kb on - strand, within Psest_4272 at 4463.409 kb on + strand, within Psest_4272 at 4463.410 kb on - strand, within Psest_4272 at 4463.410 kb on - strand, within Psest_4272 at 4463.410 kb on - strand, within Psest_4272 at 4463.412 kb on + strand, within Psest_4272 at 4463.412 kb on + strand, within Psest_4272 at 4463.412 kb on + strand, within Psest_4272 at 4463.412 kb on + strand, within Psest_4272 at 4463.533 kb on + strand at 4463.533 kb on + strand at 4463.533 kb on + strand at 4463.534 kb on - strand at 4463.534 kb on - strand at 4463.638 kb on + strand, within Psest_4273 at 4463.638 kb on + strand, within Psest_4273 at 4463.638 kb on + strand, within Psest_4273 at 4463.638 kb on + strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.873 kb on - strand, within Psest_4273 at 4464.197 kb on + strand, within Psest_4273 at 4464.197 kb on + strand, within Psest_4273 at 4464.197 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.206 kb on - strand, within Psest_4273 at 4464.206 kb on - strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.209 kb on - strand, within Psest_4273 at 4464.209 kb on - strand, within Psest_4273 at 4464.274 kb on + strand, within Psest_4273 at 4464.275 kb on - strand, within Psest_4273 at 4464.275 kb on - strand, within Psest_4273 at 4464.275 kb on - strand, within Psest_4273 at 4464.275 kb on - strand, within Psest_4273 at 4464.343 kb on + strand, within Psest_4273 at 4464.343 kb on + strand, within Psest_4273 at 4464.343 kb on + strand, within Psest_4273 at 4464.344 kb on - strand, within Psest_4273 at 4464.344 kb on - strand, within Psest_4273 at 4464.344 kb on - strand, within Psest_4273 at 4464.344 kb on - strand, within Psest_4273 at 4464.545 kb on - strand at 4464.545 kb on - strand at 4464.545 kb on - strand at 4464.812 kb on - strand, within Psest_4274 at 4464.920 kb on + strand, within Psest_4274 at 4464.921 kb on - strand, within Psest_4274 at 4464.952 kb on + strand, within Psest_4274 at 4464.952 kb on + strand, within Psest_4274 at 4464.953 kb on - strand, within Psest_4274 at 4464.953 kb on - strand, within Psest_4274 at 4465.316 kb on - strand at 4465.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 4,462,609 + +0.3 4,462,618 + -0.9 4,462,619 - +2.1 4,462,619 - -1.3 4,462,630 + -0.7 4,462,744 + +0.4 4,462,754 - -0.1 4,462,791 + +0.4 4,462,792 - -1.7 4,462,792 - -0.2 4,462,792 - +0.1 4,462,804 - +1.5 4,462,804 - -0.8 4,462,920 - Psest_4272 0.25 -0.2 4,462,984 + Psest_4272 0.33 +1.4 4,463,373 + Psest_4272 0.84 +3.3 4,463,373 + Psest_4272 0.84 +0.3 4,463,373 + Psest_4272 0.84 -0.7 4,463,374 - Psest_4272 0.84 +0.1 4,463,374 - Psest_4272 0.84 -0.7 4,463,374 - Psest_4272 0.84 +0.4 4,463,374 - Psest_4272 0.84 -0.6 4,463,409 + Psest_4272 0.89 -1.2 4,463,410 - Psest_4272 0.89 +0.1 4,463,410 - Psest_4272 0.89 -0.1 4,463,410 - Psest_4272 0.89 +0.4 4,463,412 + Psest_4272 0.89 +0.7 4,463,412 + Psest_4272 0.89 -0.5 4,463,412 + Psest_4272 0.89 -0.2 4,463,412 + Psest_4272 0.89 -0.0 4,463,533 + +2.1 4,463,533 + +0.9 4,463,533 + +2.2 4,463,534 - +0.9 4,463,534 - -0.5 4,463,638 + Psest_4273 0.14 +1.2 4,463,638 + Psest_4273 0.14 +1.5 4,463,638 + Psest_4273 0.14 +0.9 4,463,638 + Psest_4273 0.14 +0.7 4,463,639 - Psest_4273 0.15 +2.7 4,463,639 - Psest_4273 0.15 +0.1 4,463,639 - Psest_4273 0.15 +0.8 4,463,639 - Psest_4273 0.15 -0.0 4,463,639 - Psest_4273 0.15 +2.7 4,463,639 - Psest_4273 0.15 +1.1 4,463,873 - Psest_4273 0.40 +0.5 4,464,197 + Psest_4273 0.74 +4.3 4,464,197 + Psest_4273 0.74 +1.2 4,464,197 + Psest_4273 0.74 +2.5 4,464,205 + Psest_4273 0.75 +1.7 4,464,205 + Psest_4273 0.75 -1.3 4,464,205 + Psest_4273 0.75 -0.1 4,464,205 + Psest_4273 0.75 +0.8 4,464,205 + Psest_4273 0.75 +0.6 4,464,206 - Psest_4273 0.75 +3.1 4,464,206 - Psest_4273 0.75 +1.5 4,464,208 + Psest_4273 0.75 -0.5 4,464,208 + Psest_4273 0.75 +1.5 4,464,208 + Psest_4273 0.75 -0.5 4,464,208 + Psest_4273 0.75 +2.2 4,464,208 + Psest_4273 0.75 +2.3 4,464,208 + Psest_4273 0.75 +0.3 4,464,209 - Psest_4273 0.75 +0.9 4,464,209 - Psest_4273 0.75 +0.2 4,464,274 + Psest_4273 0.82 -1.3 4,464,275 - Psest_4273 0.82 +1.5 4,464,275 - Psest_4273 0.82 +1.9 4,464,275 - Psest_4273 0.82 +0.5 4,464,275 - Psest_4273 0.82 -0.4 4,464,343 + Psest_4273 0.90 +1.1 4,464,343 + Psest_4273 0.90 +0.8 4,464,343 + Psest_4273 0.90 +0.4 4,464,344 - Psest_4273 0.90 +1.4 4,464,344 - Psest_4273 0.90 -0.1 4,464,344 - Psest_4273 0.90 +0.9 4,464,344 - Psest_4273 0.90 +0.5 4,464,545 - +0.2 4,464,545 - -0.1 4,464,545 - -0.6 4,464,812 - Psest_4274 0.50 +0.1 4,464,920 + Psest_4274 0.69 +0.3 4,464,921 - Psest_4274 0.69 +1.9 4,464,952 + Psest_4274 0.75 -0.8 4,464,952 + Psest_4274 0.75 +1.1 4,464,953 - Psest_4274 0.75 -1.8 4,464,953 - Psest_4274 0.75 +0.6 4,465,316 - -1.5 4,465,316 - +0.0
Or see this region's nucleotide sequence