Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3472 and Psest_3473 are separated by 15 nucleotides Psest_3473 and Psest_3474 overlap by 14 nucleotides Psest_3474 and Psest_3475 overlap by 4 nucleotides
Psest_3472: Psest_3472 - Long-chain acyl-CoA synthetases (AMP-forming), at 3,641,767 to 3,643,212
_3472
Psest_3473: Psest_3473 - hypothetical protein, at 3,643,228 to 3,643,899
_3473
Psest_3474: Psest_3474 - Short-chain dehydrogenases of various substrate specificities, at 3,643,886 to 3,644,719
_3474
Psest_3475: Psest_3475 - hypothetical protein, at 3,644,716 to 3,645,366
_3475
Position (kb)
3643
3644 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3642.628 kb on + strand, within Psest_3472 at 3643.276 kb on + strand at 3643.276 kb on + strand at 3643.277 kb on - strand at 3643.336 kb on + strand, within Psest_3473 at 3643.336 kb on + strand, within Psest_3473 at 3643.337 kb on - strand, within Psest_3473 at 3643.337 kb on - strand, within Psest_3473 at 3643.337 kb on - strand, within Psest_3473 at 3643.337 kb on - strand, within Psest_3473 at 3643.337 kb on - strand, within Psest_3473 at 3643.337 kb on - strand, within Psest_3473 at 3643.337 kb on - strand, within Psest_3473 at 3643.360 kb on + strand, within Psest_3473 at 3643.361 kb on - strand, within Psest_3473 at 3643.453 kb on + strand, within Psest_3473 at 3643.454 kb on - strand, within Psest_3473 at 3643.574 kb on - strand, within Psest_3473 at 3643.574 kb on - strand, within Psest_3473 at 3643.574 kb on - strand, within Psest_3473 at 3643.579 kb on + strand, within Psest_3473 at 3643.579 kb on + strand, within Psest_3473 at 3643.835 kb on - strand at 3644.414 kb on + strand, within Psest_3474 at 3644.414 kb on + strand, within Psest_3474 at 3644.414 kb on + strand, within Psest_3474 at 3644.414 kb on + strand, within Psest_3474 at 3644.415 kb on - strand, within Psest_3474 at 3644.586 kb on + strand, within Psest_3474 at 3644.839 kb on + strand, within Psest_3475 at 3644.840 kb on - strand, within Psest_3475 at 3644.840 kb on - strand, within Psest_3475 at 3644.840 kb on - strand, within Psest_3475 at 3644.840 kb on - strand, within Psest_3475
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 3,642,628 + Psest_3472 0.60 +0.7 3,643,276 + +0.2 3,643,276 + +0.8 3,643,277 - +0.4 3,643,336 + Psest_3473 0.16 +0.1 3,643,336 + Psest_3473 0.16 +1.4 3,643,337 - Psest_3473 0.16 +0.1 3,643,337 - Psest_3473 0.16 +0.3 3,643,337 - Psest_3473 0.16 +1.5 3,643,337 - Psest_3473 0.16 +0.6 3,643,337 - Psest_3473 0.16 +2.5 3,643,337 - Psest_3473 0.16 -0.6 3,643,337 - Psest_3473 0.16 +0.4 3,643,360 + Psest_3473 0.20 -1.5 3,643,361 - Psest_3473 0.20 -2.7 3,643,453 + Psest_3473 0.33 +0.4 3,643,454 - Psest_3473 0.34 +2.2 3,643,574 - Psest_3473 0.51 +3.2 3,643,574 - Psest_3473 0.51 +1.8 3,643,574 - Psest_3473 0.51 -0.3 3,643,579 + Psest_3473 0.52 +1.9 3,643,579 + Psest_3473 0.52 +3.3 3,643,835 - -1.4 3,644,414 + Psest_3474 0.63 -2.2 3,644,414 + Psest_3474 0.63 -1.3 3,644,414 + Psest_3474 0.63 +0.5 3,644,414 + Psest_3474 0.63 +0.2 3,644,415 - Psest_3474 0.63 -1.9 3,644,586 + Psest_3474 0.84 -1.6 3,644,839 + Psest_3475 0.19 -0.2 3,644,840 - Psest_3475 0.19 +0.8 3,644,840 - Psest_3475 0.19 +0.0 3,644,840 - Psest_3475 0.19 -0.1 3,644,840 - Psest_3475 0.19 +0.7
Or see this region's nucleotide sequence