Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3135 and Psest_3136 are separated by 16 nucleotides Psest_3136 and Psest_3137 are separated by 30 nucleotides
Psest_3135: Psest_3135 - ABC-type uncharacterized transport system, permease component, at 3,310,648 to 3,311,448
_3135
Psest_3136: Psest_3136 - Putative Mg2+ and Co2+ transporter CorB, at 3,311,465 to 3,312,751
_3136
Psest_3137: Psest_3137 - phosphoribosylglycinamide formyltransferase 2, at 3,312,782 to 3,313,963
_3137
Position (kb)
3311
3312
3313 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3310.571 kb on - strand at 3310.575 kb on - strand at 3310.647 kb on + strand at 3311.443 kb on - strand at 3311.578 kb on - strand at 3311.784 kb on + strand, within Psest_3136 at 3311.784 kb on + strand, within Psest_3136 at 3311.784 kb on + strand, within Psest_3136 at 3312.042 kb on + strand, within Psest_3136 at 3312.153 kb on + strand, within Psest_3136 at 3312.153 kb on + strand, within Psest_3136 at 3312.154 kb on - strand, within Psest_3136 at 3312.154 kb on - strand, within Psest_3136 at 3312.300 kb on - strand, within Psest_3136 at 3312.300 kb on - strand, within Psest_3136 at 3312.378 kb on + strand, within Psest_3136 at 3312.379 kb on - strand, within Psest_3136 at 3312.386 kb on + strand, within Psest_3136 at 3312.524 kb on + strand, within Psest_3136 at 3312.524 kb on + strand, within Psest_3136 at 3312.524 kb on + strand, within Psest_3136 at 3312.525 kb on - strand, within Psest_3136 at 3312.525 kb on - strand, within Psest_3136 at 3312.785 kb on + strand at 3312.786 kb on - strand at 3312.786 kb on - strand at 3312.786 kb on - strand at 3313.094 kb on - strand, within Psest_3137 at 3313.106 kb on - strand, within Psest_3137 at 3313.276 kb on - strand, within Psest_3137 at 3313.658 kb on + strand, within Psest_3137 at 3313.668 kb on + strand, within Psest_3137 at 3313.669 kb on - strand, within Psest_3137 at 3313.731 kb on + strand, within Psest_3137 at 3313.731 kb on + strand, within Psest_3137 at 3313.731 kb on + strand, within Psest_3137 at 3313.732 kb on - strand, within Psest_3137 at 3313.732 kb on - strand, within Psest_3137 at 3313.732 kb on - strand, within Psest_3137 at 3313.732 kb on - strand, within Psest_3137
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 3,310,571 - -0.9 3,310,575 - +0.1 3,310,647 + +1.0 3,311,443 - +0.4 3,311,578 - -0.2 3,311,784 + Psest_3136 0.25 +1.2 3,311,784 + Psest_3136 0.25 +0.4 3,311,784 + Psest_3136 0.25 +0.2 3,312,042 + Psest_3136 0.45 +0.9 3,312,153 + Psest_3136 0.53 +1.6 3,312,153 + Psest_3136 0.53 +0.9 3,312,154 - Psest_3136 0.54 +0.8 3,312,154 - Psest_3136 0.54 +1.7 3,312,300 - Psest_3136 0.65 +1.4 3,312,300 - Psest_3136 0.65 +1.6 3,312,378 + Psest_3136 0.71 +2.2 3,312,379 - Psest_3136 0.71 -0.4 3,312,386 + Psest_3136 0.72 +0.3 3,312,524 + Psest_3136 0.82 +2.1 3,312,524 + Psest_3136 0.82 +0.6 3,312,524 + Psest_3136 0.82 +2.8 3,312,525 - Psest_3136 0.82 +1.8 3,312,525 - Psest_3136 0.82 +1.9 3,312,785 + +0.5 3,312,786 - -2.8 3,312,786 - +0.1 3,312,786 - -1.4 3,313,094 - Psest_3137 0.26 -0.3 3,313,106 - Psest_3137 0.27 -0.3 3,313,276 - Psest_3137 0.42 +0.9 3,313,658 + Psest_3137 0.74 +0.4 3,313,668 + Psest_3137 0.75 -0.6 3,313,669 - Psest_3137 0.75 +0.3 3,313,731 + Psest_3137 0.80 -1.2 3,313,731 + Psest_3137 0.80 +0.2 3,313,731 + Psest_3137 0.80 -1.3 3,313,732 - Psest_3137 0.80 +0.1 3,313,732 - Psest_3137 0.80 -0.0 3,313,732 - Psest_3137 0.80 +0.8 3,313,732 - Psest_3137 0.80 +1.1
Or see this region's nucleotide sequence