Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3114 and Psest_3115 are separated by 103 nucleotides Psest_3115 and Psest_3116 overlap by 4 nucleotides Psest_3116 and Psest_3117 overlap by 4 nucleotides
Psest_3114: Psest_3114 - electron transport complex, RnfABCDGE type, C subunit, at 3,290,502 to 3,293,180
_3114
Psest_3115: Psest_3115 - electron transport complex, RnfABCDGE type, D subunit, at 3,293,284 to 3,294,312
_3115
Psest_3116: Psest_3116 - electron transport complex, RnfABCDGE type, G subunit, at 3,294,309 to 3,295,088
_3116
Psest_3117: Psest_3117 - electron transport complex, RnfABCDGE type, E subunit, at 3,295,085 to 3,295,798
_3117
Position (kb)
3293
3294
3295 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3293.000 kb on - strand at 3293.117 kb on - strand at 3293.166 kb on + strand at 3293.247 kb on - strand at 3293.665 kb on + strand, within Psest_3115 at 3293.807 kb on + strand, within Psest_3115 at 3293.807 kb on + strand, within Psest_3115 at 3293.807 kb on + strand, within Psest_3115 at 3293.807 kb on + strand, within Psest_3115 at 3293.807 kb on + strand, within Psest_3115 at 3293.807 kb on + strand, within Psest_3115 at 3293.808 kb on - strand, within Psest_3115 at 3293.808 kb on - strand, within Psest_3115 at 3293.808 kb on - strand, within Psest_3115 at 3293.808 kb on - strand, within Psest_3115 at 3293.808 kb on - strand, within Psest_3115 at 3293.984 kb on + strand, within Psest_3115 at 3293.984 kb on + strand, within Psest_3115 at 3293.984 kb on + strand, within Psest_3115 at 3293.984 kb on + strand, within Psest_3115 at 3293.985 kb on - strand, within Psest_3115 at 3293.985 kb on - strand, within Psest_3115 at 3293.985 kb on - strand, within Psest_3115 at 3293.985 kb on - strand, within Psest_3115 at 3293.985 kb on - strand, within Psest_3115 at 3294.154 kb on - strand, within Psest_3115 at 3294.163 kb on + strand, within Psest_3115 at 3294.163 kb on + strand, within Psest_3115 at 3294.163 kb on + strand, within Psest_3115 at 3294.163 kb on + strand, within Psest_3115 at 3294.163 kb on + strand, within Psest_3115 at 3294.163 kb on + strand, within Psest_3115 at 3294.163 kb on + strand, within Psest_3115 at 3294.163 kb on + strand, within Psest_3115 at 3294.164 kb on - strand, within Psest_3115 at 3294.164 kb on - strand, within Psest_3115 at 3294.164 kb on - strand, within Psest_3115 at 3294.164 kb on - strand, within Psest_3115 at 3294.164 kb on - strand, within Psest_3115 at 3294.164 kb on - strand, within Psest_3115 at 3294.247 kb on + strand at 3294.250 kb on + strand at 3294.250 kb on + strand at 3294.250 kb on + strand at 3294.251 kb on - strand at 3294.251 kb on - strand at 3294.251 kb on - strand at 3294.251 kb on - strand at 3294.251 kb on - strand at 3294.251 kb on - strand at 3294.268 kb on + strand at 3294.268 kb on + strand at 3294.268 kb on + strand at 3294.428 kb on + strand, within Psest_3116 at 3294.428 kb on + strand, within Psest_3116 at 3294.458 kb on - strand, within Psest_3116 at 3294.492 kb on + strand, within Psest_3116 at 3294.492 kb on + strand, within Psest_3116 at 3294.492 kb on + strand, within Psest_3116 at 3294.492 kb on + strand, within Psest_3116 at 3294.493 kb on - strand, within Psest_3116 at 3294.493 kb on - strand, within Psest_3116 at 3294.493 kb on - strand, within Psest_3116 at 3294.493 kb on - strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.567 kb on + strand, within Psest_3116 at 3294.568 kb on - strand, within Psest_3116 at 3294.568 kb on - strand, within Psest_3116 at 3294.568 kb on - strand, within Psest_3116 at 3294.568 kb on - strand, within Psest_3116 at 3294.568 kb on - strand, within Psest_3116 at 3294.568 kb on - strand, within Psest_3116 at 3294.568 kb on - strand, within Psest_3116 at 3294.631 kb on - strand, within Psest_3116 at 3294.900 kb on + strand, within Psest_3116 at 3294.900 kb on + strand, within Psest_3116 at 3294.901 kb on - strand, within Psest_3116
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 3,293,000 - +0.6 3,293,117 - -2.5 3,293,166 + -1.3 3,293,247 - +0.4 3,293,665 + Psest_3115 0.37 +0.6 3,293,807 + Psest_3115 0.51 +2.4 3,293,807 + Psest_3115 0.51 +0.8 3,293,807 + Psest_3115 0.51 +0.8 3,293,807 + Psest_3115 0.51 +2.1 3,293,807 + Psest_3115 0.51 -0.4 3,293,807 + Psest_3115 0.51 -0.2 3,293,808 - Psest_3115 0.51 +1.9 3,293,808 - Psest_3115 0.51 +2.1 3,293,808 - Psest_3115 0.51 +1.0 3,293,808 - Psest_3115 0.51 +1.7 3,293,808 - Psest_3115 0.51 +1.7 3,293,984 + Psest_3115 0.68 +0.8 3,293,984 + Psest_3115 0.68 -1.2 3,293,984 + Psest_3115 0.68 -1.9 3,293,984 + Psest_3115 0.68 +2.4 3,293,985 - Psest_3115 0.68 +3.0 3,293,985 - Psest_3115 0.68 +1.4 3,293,985 - Psest_3115 0.68 +1.3 3,293,985 - Psest_3115 0.68 +2.1 3,293,985 - Psest_3115 0.68 +1.4 3,294,154 - Psest_3115 0.85 -0.2 3,294,163 + Psest_3115 0.85 +1.4 3,294,163 + Psest_3115 0.85 +2.1 3,294,163 + Psest_3115 0.85 +0.4 3,294,163 + Psest_3115 0.85 +1.4 3,294,163 + Psest_3115 0.85 +1.9 3,294,163 + Psest_3115 0.85 +2.4 3,294,163 + Psest_3115 0.85 +0.6 3,294,163 + Psest_3115 0.85 -0.8 3,294,164 - Psest_3115 0.86 +1.1 3,294,164 - Psest_3115 0.86 +0.5 3,294,164 - Psest_3115 0.86 +0.8 3,294,164 - Psest_3115 0.86 +2.3 3,294,164 - Psest_3115 0.86 +3.1 3,294,164 - Psest_3115 0.86 -0.9 3,294,247 + +0.4 3,294,250 + +1.4 3,294,250 + -0.9 3,294,250 + -0.2 3,294,251 - -0.4 3,294,251 - +3.0 3,294,251 - +1.6 3,294,251 - -0.1 3,294,251 - +1.4 3,294,251 - +1.4 3,294,268 + +2.6 3,294,268 + +0.1 3,294,268 + -1.1 3,294,428 + Psest_3116 0.15 +0.0 3,294,428 + Psest_3116 0.15 -0.3 3,294,458 - Psest_3116 0.19 +1.9 3,294,492 + Psest_3116 0.23 +2.0 3,294,492 + Psest_3116 0.23 +0.3 3,294,492 + Psest_3116 0.23 +0.3 3,294,492 + Psest_3116 0.23 +0.2 3,294,493 - Psest_3116 0.24 +0.6 3,294,493 - Psest_3116 0.24 +1.4 3,294,493 - Psest_3116 0.24 -1.3 3,294,493 - Psest_3116 0.24 +1.3 3,294,567 + Psest_3116 0.33 +0.8 3,294,567 + Psest_3116 0.33 +0.4 3,294,567 + Psest_3116 0.33 -0.6 3,294,567 + Psest_3116 0.33 -2.3 3,294,567 + Psest_3116 0.33 +0.3 3,294,567 + Psest_3116 0.33 -1.0 3,294,567 + Psest_3116 0.33 +1.7 3,294,567 + Psest_3116 0.33 +0.0 3,294,567 + Psest_3116 0.33 +1.7 3,294,568 - Psest_3116 0.33 +0.4 3,294,568 - Psest_3116 0.33 +1.1 3,294,568 - Psest_3116 0.33 +1.4 3,294,568 - Psest_3116 0.33 -0.9 3,294,568 - Psest_3116 0.33 +0.0 3,294,568 - Psest_3116 0.33 +0.4 3,294,568 - Psest_3116 0.33 -0.4 3,294,631 - Psest_3116 0.41 +1.6 3,294,900 + Psest_3116 0.76 +0.8 3,294,900 + Psest_3116 0.76 -0.1 3,294,901 - Psest_3116 0.76 +0.1
Or see this region's nucleotide sequence