Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3061 and Psest_3063 are separated by 163 nucleotides Psest_3063 and Psest_3064 overlap by 4 nucleotides Psest_3064 and Psest_3065 are separated by 127 nucleotides Psest_3065 and Psest_3066 are separated by 76 nucleotides
Psest_3061: Psest_3061 - hypothetical protein, at 3,240,152 to 3,240,922
_3061
Psest_3063: Psest_3063 - hypothetical protein, at 3,241,086 to 3,241,229
_3063
Psest_3064: Psest_3064 - hypothetical protein, at 3,241,226 to 3,241,441
_3064
Psest_3065: Psest_3065 - hypothetical protein, at 3,241,569 to 3,241,844
_3065
Psest_3066: Psest_3066 - hypothetical protein, at 3,241,921 to 3,242,961
_3066
Position (kb)
3241
3242 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3240.363 kb on + strand, within Psest_3061 at 3240.364 kb on - strand, within Psest_3061 at 3240.364 kb on - strand, within Psest_3061 at 3240.449 kb on - strand, within Psest_3061 at 3240.459 kb on + strand, within Psest_3061 at 3240.473 kb on + strand, within Psest_3061 at 3240.473 kb on + strand, within Psest_3061 at 3240.506 kb on - strand, within Psest_3061 at 3240.579 kb on - strand, within Psest_3061 at 3240.602 kb on + strand, within Psest_3061 at 3240.602 kb on + strand, within Psest_3061 at 3240.602 kb on + strand, within Psest_3061 at 3240.603 kb on - strand, within Psest_3061 at 3240.603 kb on - strand, within Psest_3061 at 3240.603 kb on - strand, within Psest_3061 at 3240.606 kb on + strand, within Psest_3061 at 3240.606 kb on + strand, within Psest_3061 at 3240.606 kb on + strand, within Psest_3061 at 3240.606 kb on + strand, within Psest_3061 at 3240.606 kb on + strand, within Psest_3061 at 3240.607 kb on - strand, within Psest_3061 at 3240.607 kb on - strand, within Psest_3061 at 3240.607 kb on - strand, within Psest_3061 at 3240.657 kb on + strand, within Psest_3061 at 3240.657 kb on + strand, within Psest_3061 at 3240.658 kb on - strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.659 kb on + strand, within Psest_3061 at 3240.660 kb on - strand, within Psest_3061 at 3240.660 kb on - strand, within Psest_3061 at 3240.660 kb on - strand, within Psest_3061 at 3240.660 kb on - strand, within Psest_3061 at 3240.746 kb on + strand, within Psest_3061 at 3240.880 kb on - strand at 3241.211 kb on + strand, within Psest_3063 at 3241.211 kb on + strand, within Psest_3063 at 3241.213 kb on + strand, within Psest_3063 at 3241.213 kb on + strand, within Psest_3063 at 3241.213 kb on + strand, within Psest_3063 at 3241.213 kb on + strand, within Psest_3063 at 3241.213 kb on + strand, within Psest_3063 at 3241.214 kb on - strand, within Psest_3063 at 3241.214 kb on - strand, within Psest_3063 at 3241.214 kb on - strand, within Psest_3063 at 3241.214 kb on - strand, within Psest_3063 at 3241.214 kb on - strand, within Psest_3063 at 3241.214 kb on - strand, within Psest_3063 at 3241.214 kb on - strand, within Psest_3063 at 3241.301 kb on + strand, within Psest_3064 at 3241.301 kb on + strand, within Psest_3064 at 3241.313 kb on + strand, within Psest_3064 at 3241.314 kb on - strand, within Psest_3064 at 3241.324 kb on - strand, within Psest_3064 at 3241.424 kb on + strand at 3241.424 kb on + strand at 3241.425 kb on - strand at 3241.425 kb on - strand at 3241.456 kb on + strand at 3241.456 kb on + strand at 3241.574 kb on + strand at 3241.588 kb on + strand at 3241.588 kb on + strand at 3241.588 kb on + strand at 3241.801 kb on - strand, within Psest_3065 at 3242.022 kb on - strand at 3242.022 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 3,240,363 + Psest_3061 0.27 -2.5 3,240,364 - Psest_3061 0.27 -1.2 3,240,364 - Psest_3061 0.27 +0.3 3,240,449 - Psest_3061 0.39 -0.9 3,240,459 + Psest_3061 0.40 +0.2 3,240,473 + Psest_3061 0.42 +0.8 3,240,473 + Psest_3061 0.42 -0.1 3,240,506 - Psest_3061 0.46 +0.8 3,240,579 - Psest_3061 0.55 +1.4 3,240,602 + Psest_3061 0.58 -0.4 3,240,602 + Psest_3061 0.58 +0.6 3,240,602 + Psest_3061 0.58 +0.7 3,240,603 - Psest_3061 0.58 -0.9 3,240,603 - Psest_3061 0.58 -1.8 3,240,603 - Psest_3061 0.58 +0.9 3,240,606 + Psest_3061 0.59 -0.9 3,240,606 + Psest_3061 0.59 +1.5 3,240,606 + Psest_3061 0.59 +4.0 3,240,606 + Psest_3061 0.59 -0.2 3,240,606 + Psest_3061 0.59 -0.0 3,240,607 - Psest_3061 0.59 +1.4 3,240,607 - Psest_3061 0.59 +0.6 3,240,607 - Psest_3061 0.59 -0.9 3,240,657 + Psest_3061 0.65 +1.4 3,240,657 + Psest_3061 0.65 +0.1 3,240,658 - Psest_3061 0.66 +0.4 3,240,659 + Psest_3061 0.66 +0.1 3,240,659 + Psest_3061 0.66 -0.6 3,240,659 + Psest_3061 0.66 -1.6 3,240,659 + Psest_3061 0.66 +0.8 3,240,659 + Psest_3061 0.66 -0.9 3,240,659 + Psest_3061 0.66 -0.2 3,240,659 + Psest_3061 0.66 +0.4 3,240,659 + Psest_3061 0.66 -1.3 3,240,659 + Psest_3061 0.66 +0.8 3,240,660 - Psest_3061 0.66 -2.0 3,240,660 - Psest_3061 0.66 -1.6 3,240,660 - Psest_3061 0.66 +1.6 3,240,660 - Psest_3061 0.66 +0.1 3,240,746 + Psest_3061 0.77 -0.6 3,240,880 - -0.1 3,241,211 + Psest_3063 0.87 -1.4 3,241,211 + Psest_3063 0.87 +0.0 3,241,213 + Psest_3063 0.88 +0.7 3,241,213 + Psest_3063 0.88 +1.2 3,241,213 + Psest_3063 0.88 +1.6 3,241,213 + Psest_3063 0.88 +0.0 3,241,213 + Psest_3063 0.88 -0.0 3,241,214 - Psest_3063 0.89 +1.2 3,241,214 - Psest_3063 0.89 +1.3 3,241,214 - Psest_3063 0.89 -1.3 3,241,214 - Psest_3063 0.89 +0.4 3,241,214 - Psest_3063 0.89 -1.8 3,241,214 - Psest_3063 0.89 -1.1 3,241,214 - Psest_3063 0.89 +1.8 3,241,301 + Psest_3064 0.35 +0.1 3,241,301 + Psest_3064 0.35 +1.6 3,241,313 + Psest_3064 0.40 -0.6 3,241,314 - Psest_3064 0.41 +0.6 3,241,324 - Psest_3064 0.45 +0.2 3,241,424 + +1.3 3,241,424 + +0.2 3,241,425 - +0.1 3,241,425 - -1.8 3,241,456 + -0.8 3,241,456 + +0.7 3,241,574 + +1.7 3,241,588 + -0.2 3,241,588 + -0.6 3,241,588 + +0.4 3,241,801 - Psest_3065 0.84 +0.4 3,242,022 - -0.6 3,242,022 - -0.2
Or see this region's nucleotide sequence