Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2849 and Psest_2850 overlap by 1 nucleotides Psest_2850 and Psest_2851 overlap by 1 nucleotides
Psest_2849: Psest_2849 - Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit, at 3,038,901 to 3,040,400
_2849
Psest_2850: Psest_2850 - Multisubunit Na+/H+ antiporter, MnhC subunit, at 3,040,400 to 3,040,726
_2850
Psest_2851: Psest_2851 - NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit, at 3,040,726 to 3,043,518
_2851
Position (kb)
3040
3041 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3039.403 kb on + strand, within Psest_2849 at 3039.407 kb on - strand, within Psest_2849 at 3039.407 kb on - strand, within Psest_2849 at 3039.407 kb on - strand, within Psest_2849 at 3039.484 kb on + strand, within Psest_2849 at 3039.582 kb on - strand, within Psest_2849 at 3039.621 kb on - strand, within Psest_2849 at 3039.621 kb on - strand, within Psest_2849 at 3039.700 kb on + strand, within Psest_2849 at 3039.701 kb on - strand, within Psest_2849 at 3039.721 kb on + strand, within Psest_2849 at 3039.863 kb on - strand, within Psest_2849 at 3039.919 kb on + strand, within Psest_2849 at 3039.920 kb on - strand, within Psest_2849 at 3039.920 kb on - strand, within Psest_2849 at 3039.920 kb on - strand, within Psest_2849 at 3039.920 kb on - strand, within Psest_2849 at 3039.920 kb on - strand, within Psest_2849 at 3039.974 kb on - strand, within Psest_2849 at 3040.067 kb on - strand, within Psest_2849 at 3040.222 kb on + strand, within Psest_2849 at 3040.222 kb on + strand, within Psest_2849 at 3040.223 kb on - strand, within Psest_2849 at 3040.223 kb on - strand, within Psest_2849 at 3040.270 kb on - strand at 3040.270 kb on - strand at 3040.507 kb on + strand, within Psest_2850 at 3040.508 kb on - strand, within Psest_2850 at 3040.705 kb on + strand at 3040.706 kb on - strand at 3040.811 kb on + strand at 3040.811 kb on + strand at 3040.811 kb on + strand at 3040.811 kb on + strand at 3040.974 kb on - strand at 3041.049 kb on + strand, within Psest_2851 at 3041.050 kb on - strand, within Psest_2851 at 3041.050 kb on - strand, within Psest_2851 at 3041.240 kb on + strand, within Psest_2851 at 3041.241 kb on - strand, within Psest_2851 at 3041.241 kb on - strand, within Psest_2851 at 3041.241 kb on - strand, within Psest_2851 at 3041.244 kb on + strand, within Psest_2851 at 3041.244 kb on + strand, within Psest_2851 at 3041.287 kb on - strand, within Psest_2851 at 3041.384 kb on + strand, within Psest_2851 at 3041.405 kb on + strand, within Psest_2851 at 3041.531 kb on - strand, within Psest_2851
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 3,039,403 + Psest_2849 0.33 -1.8 3,039,407 - Psest_2849 0.34 -0.7 3,039,407 - Psest_2849 0.34 +1.9 3,039,407 - Psest_2849 0.34 -0.2 3,039,484 + Psest_2849 0.39 +0.6 3,039,582 - Psest_2849 0.45 +3.2 3,039,621 - Psest_2849 0.48 -1.5 3,039,621 - Psest_2849 0.48 -0.4 3,039,700 + Psest_2849 0.53 -1.0 3,039,701 - Psest_2849 0.53 -1.7 3,039,721 + Psest_2849 0.55 +0.1 3,039,863 - Psest_2849 0.64 -0.1 3,039,919 + Psest_2849 0.68 -2.2 3,039,920 - Psest_2849 0.68 +0.3 3,039,920 - Psest_2849 0.68 -0.4 3,039,920 - Psest_2849 0.68 +0.6 3,039,920 - Psest_2849 0.68 +1.3 3,039,920 - Psest_2849 0.68 -1.0 3,039,974 - Psest_2849 0.72 -0.2 3,040,067 - Psest_2849 0.78 -1.5 3,040,222 + Psest_2849 0.88 -0.4 3,040,222 + Psest_2849 0.88 -0.4 3,040,223 - Psest_2849 0.88 -0.3 3,040,223 - Psest_2849 0.88 +0.6 3,040,270 - -2.3 3,040,270 - -0.9 3,040,507 + Psest_2850 0.33 -1.2 3,040,508 - Psest_2850 0.33 +1.5 3,040,705 + -0.9 3,040,706 - +0.5 3,040,811 + +0.1 3,040,811 + +1.2 3,040,811 + -0.3 3,040,811 + -0.1 3,040,974 - +0.2 3,041,049 + Psest_2851 0.12 +0.5 3,041,050 - Psest_2851 0.12 -1.7 3,041,050 - Psest_2851 0.12 +2.1 3,041,240 + Psest_2851 0.18 -0.5 3,041,241 - Psest_2851 0.18 -1.2 3,041,241 - Psest_2851 0.18 +0.3 3,041,241 - Psest_2851 0.18 +1.4 3,041,244 + Psest_2851 0.19 -0.9 3,041,244 + Psest_2851 0.19 -1.4 3,041,287 - Psest_2851 0.20 +0.8 3,041,384 + Psest_2851 0.24 -0.3 3,041,405 + Psest_2851 0.24 -0.4 3,041,531 - Psest_2851 0.29 +0.7
Or see this region's nucleotide sequence