Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2426 and Psest_2427 are separated by 520 nucleotides Psest_2427 and Psest_2428 are separated by 7 nucleotides Psest_2428 and Psest_2429 overlap by 4 nucleotides
Psest_2426: Psest_2426 - PAS domain S-box, at 2,589,576 to 2,592,041
_2426
Psest_2427: Psest_2427 - SH3 domain protein, at 2,592,562 to 2,593,236
_2427
Psest_2428: Psest_2428 - hypothetical protein, at 2,593,244 to 2,593,555
_2428
Psest_2429: Psest_2429 - Predicted branched-chain amino acid permease (azaleucine resistance), at 2,593,552 to 2,594,169
_2429
Position (kb)
2592
2593
2594 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2591.719 kb on + strand, within Psest_2426 at 2591.828 kb on + strand at 2591.828 kb on + strand at 2591.829 kb on - strand at 2591.829 kb on - strand at 2592.057 kb on - strand at 2592.121 kb on + strand at 2592.121 kb on + strand at 2592.121 kb on + strand at 2592.121 kb on + strand at 2592.122 kb on - strand at 2592.122 kb on - strand at 2592.122 kb on - strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.723 kb on + strand, within Psest_2427 at 2592.723 kb on + strand, within Psest_2427 at 2592.723 kb on + strand, within Psest_2427 at 2592.817 kb on + strand, within Psest_2427 at 2592.971 kb on + strand, within Psest_2427 at 2592.972 kb on - strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.242 kb on + strand at 2593.255 kb on - strand at 2593.255 kb on - strand at 2593.255 kb on - strand at 2593.269 kb on + strand at 2593.269 kb on + strand at 2593.269 kb on + strand at 2593.269 kb on + strand at 2593.270 kb on - strand at 2593.272 kb on + strand at 2593.272 kb on + strand at 2593.272 kb on + strand at 2593.272 kb on + strand at 2593.272 kb on + strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.302 kb on - strand, within Psest_2428 at 2593.398 kb on + strand, within Psest_2428 at 2593.398 kb on + strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.610 kb on + strand at 2593.611 kb on - strand at 2593.611 kb on - strand at 2593.611 kb on - strand at 2593.794 kb on + strand, within Psest_2429 at 2593.794 kb on + strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.911 kb on - strand, within Psest_2429 at 2593.911 kb on - strand, within Psest_2429 at 2593.911 kb on - strand, within Psest_2429 at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.213 kb on + strand at 2594.213 kb on + strand at 2594.213 kb on + strand at 2594.213 kb on + strand at 2594.213 kb on + strand at 2594.214 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 2,591,719 + Psest_2426 0.87 +0.4 2,591,828 + -0.9 2,591,828 + +0.6 2,591,829 - -0.0 2,591,829 - -0.8 2,592,057 - -0.7 2,592,121 + +0.1 2,592,121 + +0.4 2,592,121 + -0.8 2,592,121 + -1.5 2,592,122 - +3.6 2,592,122 - +0.6 2,592,122 - +0.5 2,592,569 + -0.6 2,592,569 + +0.1 2,592,569 + +0.6 2,592,569 + +0.5 2,592,569 + +1.2 2,592,570 - -1.6 2,592,570 - +1.2 2,592,570 - +0.6 2,592,570 - +1.6 2,592,723 + Psest_2427 0.24 -0.3 2,592,723 + Psest_2427 0.24 -0.3 2,592,723 + Psest_2427 0.24 +1.2 2,592,817 + Psest_2427 0.38 +1.0 2,592,971 + Psest_2427 0.61 +0.9 2,592,972 - Psest_2427 0.61 +1.3 2,593,135 + Psest_2427 0.85 -0.5 2,593,135 + Psest_2427 0.85 +0.7 2,593,135 + Psest_2427 0.85 +0.3 2,593,135 + Psest_2427 0.85 +0.1 2,593,135 + Psest_2427 0.85 -0.9 2,593,136 - Psest_2427 0.85 +0.6 2,593,136 - Psest_2427 0.85 -0.9 2,593,136 - Psest_2427 0.85 +0.1 2,593,136 - Psest_2427 0.85 +1.1 2,593,136 - Psest_2427 0.85 +0.7 2,593,136 - Psest_2427 0.85 +0.2 2,593,136 - Psest_2427 0.85 -0.5 2,593,136 - Psest_2427 0.85 +1.2 2,593,136 - Psest_2427 0.85 +1.8 2,593,136 - Psest_2427 0.85 +0.9 2,593,242 + +2.0 2,593,255 - -1.1 2,593,255 - +0.6 2,593,255 - -0.4 2,593,269 + +0.1 2,593,269 + +0.2 2,593,269 + +0.4 2,593,269 + +0.8 2,593,270 - +0.9 2,593,272 + -1.4 2,593,272 + -1.1 2,593,272 + +0.3 2,593,272 + -1.1 2,593,272 + -0.4 2,593,273 - -1.6 2,593,273 - -0.9 2,593,273 - +0.1 2,593,273 - +1.6 2,593,273 - -0.9 2,593,273 - +1.0 2,593,273 - -0.1 2,593,273 - +1.8 2,593,273 - -0.7 2,593,302 - Psest_2428 0.19 +1.6 2,593,398 + Psest_2428 0.49 +0.1 2,593,398 + Psest_2428 0.49 -1.7 2,593,399 - Psest_2428 0.50 -1.1 2,593,399 - Psest_2428 0.50 -0.9 2,593,399 - Psest_2428 0.50 +1.5 2,593,399 - Psest_2428 0.50 -0.6 2,593,399 - Psest_2428 0.50 -0.5 2,593,610 + +0.1 2,593,611 - +0.2 2,593,611 - -0.5 2,593,611 - -0.1 2,593,794 + Psest_2429 0.39 -1.8 2,593,794 + Psest_2429 0.39 -2.9 2,593,795 - Psest_2429 0.39 +1.8 2,593,795 - Psest_2429 0.39 +0.2 2,593,795 - Psest_2429 0.39 -1.8 2,593,795 - Psest_2429 0.39 -0.3 2,593,795 - Psest_2429 0.39 -1.1 2,593,795 - Psest_2429 0.39 +0.5 2,593,911 - Psest_2429 0.58 +0.2 2,593,911 - Psest_2429 0.58 -0.2 2,593,911 - Psest_2429 0.58 +1.5 2,594,211 + +2.2 2,594,211 + +1.0 2,594,211 + +1.5 2,594,211 + +0.4 2,594,211 + -3.4 2,594,211 + -0.5 2,594,211 + -2.6 2,594,211 + +2.1 2,594,211 + +0.9 2,594,211 + -2.5 2,594,211 + +0.2 2,594,211 + -1.1 2,594,211 + +0.7 2,594,212 - -1.2 2,594,212 - -1.5 2,594,212 - -0.5 2,594,212 - +1.2 2,594,212 - -1.7 2,594,212 - -0.6 2,594,212 - -0.4 2,594,212 - -0.5 2,594,212 - -0.2 2,594,212 - +1.2 2,594,212 - +1.0 2,594,213 + -2.1 2,594,213 + -0.5 2,594,213 + +1.1 2,594,213 + -2.2 2,594,213 + +1.2 2,594,214 - -0.0
Or see this region's nucleotide sequence