Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2310 and Psest_2311 are separated by 99 nucleotides Psest_2311 and Psest_2312 are separated by 84 nucleotides Psest_2312 and Psest_2313 are separated by 2 nucleotides Psest_2313 and Psest_2314 are separated by 56 nucleotides
Psest_2310: Psest_2310 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 2,461,984 to 2,462,976
_2310
Psest_2311: Psest_2311 - RNA polymerase sigma factor, sigma-70 family, at 2,463,076 to 2,463,666
_2311
Psest_2312: Psest_2312 - Small-conductance mechanosensitive channel, at 2,463,751 to 2,464,575
_2312
Psest_2313: Psest_2313 - hypothetical protein, at 2,464,578 to 2,464,820
_2313
Psest_2314: Psest_2314 - Mg2+ and Co2+ transporters, at 2,464,877 to 2,465,872
_2314
Position (kb)
2463
2464
2465 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2462.862 kb on - strand, within Psest_2310 at 2463.000 kb on - strand at 2463.016 kb on - strand at 2463.016 kb on - strand at 2463.057 kb on - strand at 2463.057 kb on - strand at 2463.059 kb on - strand at 2463.059 kb on - strand at 2463.731 kb on - strand at 2463.731 kb on - strand at 2463.900 kb on - strand, within Psest_2312 at 2463.900 kb on - strand, within Psest_2312 at 2463.900 kb on - strand, within Psest_2312 at 2463.900 kb on - strand, within Psest_2312 at 2463.902 kb on - strand, within Psest_2312 at 2463.902 kb on - strand, within Psest_2312 at 2463.902 kb on - strand, within Psest_2312 at 2463.902 kb on - strand, within Psest_2312 at 2463.902 kb on - strand, within Psest_2312 at 2463.902 kb on - strand, within Psest_2312 at 2463.902 kb on - strand, within Psest_2312 at 2463.902 kb on - strand, within Psest_2312 at 2463.915 kb on - strand, within Psest_2312 at 2463.915 kb on - strand, within Psest_2312 at 2463.915 kb on - strand, within Psest_2312 at 2463.915 kb on - strand, within Psest_2312 at 2464.014 kb on - strand, within Psest_2312 at 2464.014 kb on - strand, within Psest_2312 at 2464.014 kb on - strand, within Psest_2312 at 2464.014 kb on - strand, within Psest_2312 at 2464.014 kb on - strand, within Psest_2312 at 2464.014 kb on - strand, within Psest_2312 at 2464.040 kb on - strand, within Psest_2312 at 2464.040 kb on - strand, within Psest_2312 at 2464.040 kb on - strand, within Psest_2312 at 2464.311 kb on - strand, within Psest_2312 at 2464.311 kb on - strand, within Psest_2312 at 2464.345 kb on - strand, within Psest_2312 at 2464.345 kb on - strand, within Psest_2312 at 2464.345 kb on - strand, within Psest_2312 at 2464.345 kb on - strand, within Psest_2312 at 2464.345 kb on - strand, within Psest_2312 at 2464.349 kb on - strand, within Psest_2312 at 2464.349 kb on - strand, within Psest_2312 at 2464.349 kb on - strand, within Psest_2312 at 2464.349 kb on - strand, within Psest_2312 at 2464.838 kb on - strand at 2464.838 kb on - strand at 2464.838 kb on - strand at 2464.838 kb on - strand at 2464.959 kb on + strand at 2465.058 kb on + strand, within Psest_2314 at 2465.058 kb on + strand, within Psest_2314 at 2465.058 kb on + strand, within Psest_2314 at 2465.058 kb on + strand, within Psest_2314 at 2465.058 kb on + strand, within Psest_2314 at 2465.058 kb on + strand, within Psest_2314 at 2465.058 kb on + strand, within Psest_2314 at 2465.059 kb on - strand, within Psest_2314 at 2465.059 kb on - strand, within Psest_2314 at 2465.059 kb on - strand, within Psest_2314 at 2465.059 kb on - strand, within Psest_2314 at 2465.320 kb on + strand, within Psest_2314 at 2465.320 kb on + strand, within Psest_2314 at 2465.320 kb on + strand, within Psest_2314 at 2465.321 kb on - strand, within Psest_2314 at 2465.393 kb on + strand, within Psest_2314 at 2465.422 kb on - strand, within Psest_2314
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 2,462,862 - Psest_2310 0.88 +0.3 2,463,000 - +0.4 2,463,016 - -0.4 2,463,016 - +2.9 2,463,057 - +0.6 2,463,057 - +1.3 2,463,059 - +1.3 2,463,059 - +0.1 2,463,731 - +0.9 2,463,731 - +0.7 2,463,900 - Psest_2312 0.18 +0.1 2,463,900 - Psest_2312 0.18 +1.4 2,463,900 - Psest_2312 0.18 +2.0 2,463,900 - Psest_2312 0.18 +1.3 2,463,902 - Psest_2312 0.18 +0.9 2,463,902 - Psest_2312 0.18 +1.3 2,463,902 - Psest_2312 0.18 -1.0 2,463,902 - Psest_2312 0.18 +0.9 2,463,902 - Psest_2312 0.18 -1.4 2,463,902 - Psest_2312 0.18 -1.9 2,463,902 - Psest_2312 0.18 +1.2 2,463,902 - Psest_2312 0.18 +0.7 2,463,915 - Psest_2312 0.20 -1.3 2,463,915 - Psest_2312 0.20 +2.3 2,463,915 - Psest_2312 0.20 +1.0 2,463,915 - Psest_2312 0.20 +0.3 2,464,014 - Psest_2312 0.32 +2.7 2,464,014 - Psest_2312 0.32 +2.3 2,464,014 - Psest_2312 0.32 +2.5 2,464,014 - Psest_2312 0.32 +1.4 2,464,014 - Psest_2312 0.32 -0.3 2,464,014 - Psest_2312 0.32 +0.6 2,464,040 - Psest_2312 0.35 -1.0 2,464,040 - Psest_2312 0.35 +1.5 2,464,040 - Psest_2312 0.35 +1.5 2,464,311 - Psest_2312 0.68 +3.4 2,464,311 - Psest_2312 0.68 +0.0 2,464,345 - Psest_2312 0.72 +0.8 2,464,345 - Psest_2312 0.72 -1.0 2,464,345 - Psest_2312 0.72 +0.1 2,464,345 - Psest_2312 0.72 -1.5 2,464,345 - Psest_2312 0.72 +0.9 2,464,349 - Psest_2312 0.72 -0.6 2,464,349 - Psest_2312 0.72 -2.0 2,464,349 - Psest_2312 0.72 +2.1 2,464,349 - Psest_2312 0.72 +0.4 2,464,838 - +0.4 2,464,838 - +0.8 2,464,838 - -0.6 2,464,838 - +0.9 2,464,959 + -1.4 2,465,058 + Psest_2314 0.18 +0.1 2,465,058 + Psest_2314 0.18 +2.0 2,465,058 + Psest_2314 0.18 +0.8 2,465,058 + Psest_2314 0.18 -0.3 2,465,058 + Psest_2314 0.18 +0.5 2,465,058 + Psest_2314 0.18 -0.7 2,465,058 + Psest_2314 0.18 -1.0 2,465,059 - Psest_2314 0.18 +0.4 2,465,059 - Psest_2314 0.18 +1.0 2,465,059 - Psest_2314 0.18 +3.2 2,465,059 - Psest_2314 0.18 -0.1 2,465,320 + Psest_2314 0.44 +0.7 2,465,320 + Psest_2314 0.44 +0.2 2,465,320 + Psest_2314 0.44 -1.3 2,465,321 - Psest_2314 0.45 +0.7 2,465,393 + Psest_2314 0.52 -0.4 2,465,422 - Psest_2314 0.55 +0.9
Or see this region's nucleotide sequence