Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2125 and Psest_2126 are separated by 58 nucleotides Psest_2126 and Psest_2127 are separated by 24 nucleotides
Psest_2125: Psest_2125 - D-gluconate TRAP transporter, periplasmic component (from data) , at 2,256,595 to 2,257,611
_2125
Psest_2126: Psest_2126 - Transcriptional regulators, at 2,257,670 to 2,258,689
_2126
Psest_2127: Psest_2127 - Transcriptional regulator, at 2,258,714 to 2,259,625
_2127
Position (kb)
2257
2258
2259 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2256.798 kb on + strand, within Psest_2125 at 2256.798 kb on + strand, within Psest_2125 at 2256.799 kb on - strand, within Psest_2125 at 2256.799 kb on - strand, within Psest_2125 at 2256.799 kb on - strand, within Psest_2125 at 2257.270 kb on + strand, within Psest_2125 at 2257.271 kb on - strand, within Psest_2125 at 2257.285 kb on + strand, within Psest_2125 at 2257.285 kb on + strand, within Psest_2125 at 2257.285 kb on + strand, within Psest_2125 at 2257.309 kb on + strand, within Psest_2125 at 2257.705 kb on + strand at 2257.705 kb on + strand at 2257.705 kb on + strand at 2257.706 kb on - strand at 2257.994 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.109 kb on - strand, within Psest_2126 at 2258.159 kb on + strand, within Psest_2126 at 2258.160 kb on - strand, within Psest_2126 at 2258.160 kb on - strand, within Psest_2126 at 2258.319 kb on - strand, within Psest_2126 at 2258.488 kb on - strand, within Psest_2126 at 2258.488 kb on - strand, within Psest_2126 at 2258.811 kb on + strand, within Psest_2127 at 2258.811 kb on + strand, within Psest_2127 at 2258.811 kb on + strand, within Psest_2127 at 2258.811 kb on + strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.941 kb on - strand, within Psest_2127 at 2258.941 kb on - strand, within Psest_2127 at 2258.941 kb on - strand, within Psest_2127 at 2258.941 kb on - strand, within Psest_2127 at 2259.031 kb on + strand, within Psest_2127 at 2259.031 kb on + strand, within Psest_2127 at 2259.031 kb on + strand, within Psest_2127 at 2259.031 kb on + strand, within Psest_2127 at 2259.032 kb on - strand, within Psest_2127 at 2259.032 kb on - strand, within Psest_2127 at 2259.114 kb on + strand, within Psest_2127 at 2259.403 kb on + strand, within Psest_2127 at 2259.404 kb on - strand, within Psest_2127 at 2259.573 kb on + strand at 2259.573 kb on + strand at 2259.573 kb on + strand at 2259.573 kb on + strand at 2259.573 kb on + strand at 2259.574 kb on - strand at 2259.574 kb on - strand at 2259.574 kb on - strand at 2259.596 kb on + strand at 2259.596 kb on + strand at 2259.596 kb on + strand at 2259.664 kb on + strand at 2259.665 kb on - strand at 2259.665 kb on - strand at 2259.665 kb on - strand at 2259.685 kb on + strand at 2259.686 kb on - strand at 2259.686 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 2,256,798 + Psest_2125 0.20 -0.1 2,256,798 + Psest_2125 0.20 -0.4 2,256,799 - Psest_2125 0.20 -0.4 2,256,799 - Psest_2125 0.20 +1.1 2,256,799 - Psest_2125 0.20 -0.7 2,257,270 + Psest_2125 0.66 -0.3 2,257,271 - Psest_2125 0.66 -1.7 2,257,285 + Psest_2125 0.68 -0.9 2,257,285 + Psest_2125 0.68 +0.3 2,257,285 + Psest_2125 0.68 +0.6 2,257,309 + Psest_2125 0.70 -0.9 2,257,705 + +3.1 2,257,705 + +3.3 2,257,705 + -0.7 2,257,706 - +0.1 2,257,994 + Psest_2126 0.32 +0.6 2,258,108 + Psest_2126 0.43 -0.4 2,258,108 + Psest_2126 0.43 +0.6 2,258,108 + Psest_2126 0.43 -0.3 2,258,108 + Psest_2126 0.43 -1.1 2,258,109 - Psest_2126 0.43 +0.3 2,258,159 + Psest_2126 0.48 +2.0 2,258,160 - Psest_2126 0.48 +0.7 2,258,160 - Psest_2126 0.48 +3.2 2,258,319 - Psest_2126 0.64 +0.2 2,258,488 - Psest_2126 0.80 +1.9 2,258,488 - Psest_2126 0.80 +1.6 2,258,811 + Psest_2127 0.11 -0.9 2,258,811 + Psest_2127 0.11 +1.6 2,258,811 + Psest_2127 0.11 -1.3 2,258,811 + Psest_2127 0.11 -0.5 2,258,812 - Psest_2127 0.11 -1.0 2,258,812 - Psest_2127 0.11 -0.4 2,258,812 - Psest_2127 0.11 +0.6 2,258,812 - Psest_2127 0.11 +0.8 2,258,812 - Psest_2127 0.11 +0.4 2,258,812 - Psest_2127 0.11 -0.2 2,258,941 - Psest_2127 0.25 +0.9 2,258,941 - Psest_2127 0.25 -0.1 2,258,941 - Psest_2127 0.25 +1.1 2,258,941 - Psest_2127 0.25 -0.4 2,259,031 + Psest_2127 0.35 -1.1 2,259,031 + Psest_2127 0.35 -2.2 2,259,031 + Psest_2127 0.35 +0.4 2,259,031 + Psest_2127 0.35 +0.1 2,259,032 - Psest_2127 0.35 -0.3 2,259,032 - Psest_2127 0.35 +1.6 2,259,114 + Psest_2127 0.44 -0.1 2,259,403 + Psest_2127 0.76 -0.4 2,259,404 - Psest_2127 0.76 +0.8 2,259,573 + +1.0 2,259,573 + +0.5 2,259,573 + +0.7 2,259,573 + +1.0 2,259,573 + +0.8 2,259,574 - -2.4 2,259,574 - +0.6 2,259,574 - +0.1 2,259,596 + -1.9 2,259,596 + +0.4 2,259,596 + +0.1 2,259,664 + +0.2 2,259,665 - +0.3 2,259,665 - -0.9 2,259,665 - +0.8 2,259,685 + +0.8 2,259,686 - +0.7 2,259,686 - +0.5
Or see this region's nucleotide sequence