Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1739 and Psest_1740 are separated by 17 nucleotides Psest_1740 and Psest_1741 are separated by 74 nucleotides Psest_1741 and Psest_1742 are separated by 23 nucleotides Psest_1742 and Psest_1743 are separated by 11 nucleotides
Psest_1739: Psest_1739 - ATPases involved in chromosome partitioning, at 1,844,474 to 1,845,301
_1739
Psest_1740: Psest_1740 - RNA polymerase sigma factor, FliA/WhiG family, at 1,845,319 to 1,846,044
_1740
Psest_1741: Psest_1741 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,846,119 to 1,846,493
_1741
Psest_1742: Psest_1742 - Chemotaxis protein, at 1,846,517 to 1,847,311
_1742
Psest_1743: Psest_1743 - Chemotaxis protein histidine kinase and related kinases, at 1,847,323 to 1,849,494
_1743
Position (kb)
1846
1847 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1845.319 kb on - strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.326 kb on - strand at 1845.326 kb on - strand at 1845.484 kb on - strand, within Psest_1740 at 1845.490 kb on + strand, within Psest_1740 at 1845.523 kb on + strand, within Psest_1740 at 1845.523 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.688 kb on - strand, within Psest_1740 at 1845.688 kb on - strand, within Psest_1740 at 1845.692 kb on + strand, within Psest_1740 at 1845.693 kb on - strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.707 kb on - strand, within Psest_1740 at 1845.709 kb on + strand, within Psest_1740 at 1845.709 kb on + strand, within Psest_1740 at 1845.913 kb on + strand, within Psest_1740 at 1845.914 kb on - strand, within Psest_1740 at 1845.916 kb on + strand, within Psest_1740 at 1845.916 kb on + strand, within Psest_1740 at 1846.094 kb on + strand at 1846.094 kb on + strand at 1846.419 kb on + strand, within Psest_1741 at 1846.419 kb on + strand, within Psest_1741 at 1846.420 kb on - strand, within Psest_1741 at 1846.516 kb on + strand at 1846.516 kb on + strand at 1846.517 kb on - strand at 1846.664 kb on + strand, within Psest_1742 at 1846.665 kb on - strand, within Psest_1742 at 1846.784 kb on + strand, within Psest_1742 at 1846.784 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.869 kb on - strand, within Psest_1742 at 1846.869 kb on - strand, within Psest_1742 at 1846.965 kb on - strand, within Psest_1742 at 1846.991 kb on - strand, within Psest_1742 at 1847.245 kb on + strand at 1847.322 kb on + strand at 1847.390 kb on + strand at 1847.391 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 1,845,319 - -2.0 1,845,322 + +0.5 1,845,322 + +0.3 1,845,322 + +1.7 1,845,322 + +1.0 1,845,322 + +0.7 1,845,322 + -1.0 1,845,322 + +0.8 1,845,322 + -0.2 1,845,322 + +0.9 1,845,322 + +0.1 1,845,322 + +0.1 1,845,322 + +0.7 1,845,322 + -1.1 1,845,322 + -1.0 1,845,323 - -2.2 1,845,323 - +1.1 1,845,323 - +0.8 1,845,323 - +0.4 1,845,323 - +1.9 1,845,323 - +0.5 1,845,323 - -0.2 1,845,323 - -0.6 1,845,323 - -2.1 1,845,323 - -1.1 1,845,323 - +0.8 1,845,323 - -0.1 1,845,326 - -1.1 1,845,326 - +1.3 1,845,484 - Psest_1740 0.23 -2.4 1,845,490 + Psest_1740 0.24 +1.8 1,845,523 + Psest_1740 0.28 -0.0 1,845,523 + Psest_1740 0.28 +0.8 1,845,687 + Psest_1740 0.51 +0.2 1,845,687 + Psest_1740 0.51 +0.3 1,845,687 + Psest_1740 0.51 +1.6 1,845,687 + Psest_1740 0.51 +0.6 1,845,687 + Psest_1740 0.51 +1.0 1,845,687 + Psest_1740 0.51 -0.0 1,845,687 + Psest_1740 0.51 -0.3 1,845,687 + Psest_1740 0.51 +1.5 1,845,688 - Psest_1740 0.51 -0.0 1,845,688 - Psest_1740 0.51 +1.5 1,845,692 + Psest_1740 0.51 +0.2 1,845,693 - Psest_1740 0.52 -1.8 1,845,706 + Psest_1740 0.53 -0.1 1,845,706 + Psest_1740 0.53 -0.5 1,845,706 + Psest_1740 0.53 +1.0 1,845,706 + Psest_1740 0.53 +1.4 1,845,706 + Psest_1740 0.53 +1.9 1,845,707 - Psest_1740 0.53 +1.2 1,845,709 + Psest_1740 0.54 +1.1 1,845,709 + Psest_1740 0.54 +0.3 1,845,913 + Psest_1740 0.82 -0.2 1,845,914 - Psest_1740 0.82 +2.4 1,845,916 + Psest_1740 0.82 +1.6 1,845,916 + Psest_1740 0.82 -0.5 1,846,094 + +0.7 1,846,094 + -0.7 1,846,419 + Psest_1741 0.80 -1.6 1,846,419 + Psest_1741 0.80 +0.9 1,846,420 - Psest_1741 0.80 +2.9 1,846,516 + -1.7 1,846,516 + -1.5 1,846,517 - +0.0 1,846,664 + Psest_1742 0.18 +0.1 1,846,665 - Psest_1742 0.19 -0.4 1,846,784 + Psest_1742 0.34 -1.0 1,846,784 + Psest_1742 0.34 +1.1 1,846,859 + Psest_1742 0.43 +0.3 1,846,859 + Psest_1742 0.43 +0.5 1,846,859 + Psest_1742 0.43 -1.2 1,846,859 + Psest_1742 0.43 -0.2 1,846,859 + Psest_1742 0.43 -2.2 1,846,860 - Psest_1742 0.43 -1.2 1,846,860 - Psest_1742 0.43 +2.0 1,846,860 - Psest_1742 0.43 +0.3 1,846,860 - Psest_1742 0.43 -1.2 1,846,860 - Psest_1742 0.43 -1.7 1,846,860 - Psest_1742 0.43 +0.6 1,846,860 - Psest_1742 0.43 -0.2 1,846,860 - Psest_1742 0.43 -0.7 1,846,860 - Psest_1742 0.43 -0.1 1,846,860 - Psest_1742 0.43 +2.2 1,846,869 - Psest_1742 0.44 -0.2 1,846,869 - Psest_1742 0.44 -0.1 1,846,965 - Psest_1742 0.56 +0.4 1,846,991 - Psest_1742 0.60 -0.7 1,847,245 + -0.4 1,847,322 + -0.0 1,847,390 + +0.7 1,847,391 - -0.6
Or see this region's nucleotide sequence