Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1717 and Psest_1718 are separated by 239 nucleotides Psest_1718 and Psest_1719 are separated by 13 nucleotides Psest_1719 and Psest_1720 overlap by 8 nucleotides
Psest_1717: Psest_1717 - benzoate transporter, at 1,823,283 to 1,824,470
_1717
Psest_1718: Psest_1718 - flagellar hook-basal body complex protein FliE, at 1,824,710 to 1,825,039
_1718
Psest_1719: Psest_1719 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 1,825,053 to 1,826,837
_1719
Psest_1720: Psest_1720 - flagellar motor switch protein FliG, at 1,826,830 to 1,827,846
_1720
Position (kb)
1825
1826
1827 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1824.363 kb on + strand at 1824.364 kb on - strand at 1824.377 kb on + strand at 1824.378 kb on - strand at 1824.428 kb on + strand at 1824.480 kb on + strand at 1824.484 kb on + strand at 1824.484 kb on + strand at 1824.485 kb on - strand at 1824.485 kb on - strand at 1824.485 kb on - strand at 1824.487 kb on + strand at 1824.487 kb on + strand at 1824.488 kb on - strand at 1824.522 kb on + strand at 1824.522 kb on + strand at 1824.523 kb on - strand at 1824.616 kb on - strand at 1824.707 kb on + strand at 1824.888 kb on + strand, within Psest_1718 at 1824.987 kb on + strand, within Psest_1718 at 1824.987 kb on + strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.991 kb on + strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1825.149 kb on - strand at 1825.322 kb on + strand, within Psest_1719 at 1825.639 kb on - strand, within Psest_1719 at 1825.833 kb on + strand, within Psest_1719 at 1826.223 kb on + strand, within Psest_1719 at 1826.224 kb on - strand, within Psest_1719 at 1826.224 kb on - strand, within Psest_1719 at 1826.247 kb on + strand, within Psest_1719 at 1826.247 kb on + strand, within Psest_1719 at 1826.248 kb on - strand, within Psest_1719 at 1826.248 kb on - strand, within Psest_1719 at 1826.248 kb on - strand, within Psest_1719 at 1826.248 kb on - strand, within Psest_1719 at 1826.248 kb on - strand, within Psest_1719 at 1826.248 kb on - strand, within Psest_1719 at 1826.248 kb on - strand, within Psest_1719 at 1826.249 kb on + strand, within Psest_1719 at 1826.250 kb on - strand, within Psest_1719 at 1826.250 kb on - strand, within Psest_1719 at 1827.073 kb on + strand, within Psest_1720 at 1827.073 kb on + strand, within Psest_1720 at 1827.073 kb on + strand, within Psest_1720 at 1827.073 kb on + strand, within Psest_1720 at 1827.074 kb on - strand, within Psest_1720 at 1827.136 kb on - strand, within Psest_1720 at 1827.153 kb on + strand, within Psest_1720 at 1827.251 kb on - strand, within Psest_1720 at 1827.425 kb on + strand, within Psest_1720 at 1827.425 kb on + strand, within Psest_1720 at 1827.425 kb on + strand, within Psest_1720 at 1827.426 kb on - strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.460 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.543 kb on + strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.544 kb on - strand, within Psest_1720 at 1827.815 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 1,824,363 + -0.8 1,824,364 - -1.1 1,824,377 + +1.2 1,824,378 - -0.5 1,824,428 + -0.4 1,824,480 + +1.1 1,824,484 + +0.2 1,824,484 + -0.1 1,824,485 - +1.0 1,824,485 - -1.1 1,824,485 - -0.3 1,824,487 + -0.2 1,824,487 + -0.1 1,824,488 - -0.5 1,824,522 + -0.5 1,824,522 + -2.2 1,824,523 - +0.2 1,824,616 - +0.2 1,824,707 + -1.5 1,824,888 + Psest_1718 0.54 +1.5 1,824,987 + Psest_1718 0.84 +0.8 1,824,987 + Psest_1718 0.84 -1.4 1,824,988 - Psest_1718 0.84 +0.4 1,824,988 - Psest_1718 0.84 +0.4 1,824,988 - Psest_1718 0.84 +0.5 1,824,988 - Psest_1718 0.84 +2.8 1,824,991 + Psest_1718 0.85 +1.0 1,824,992 - Psest_1718 0.85 +1.4 1,824,992 - Psest_1718 0.85 +0.3 1,824,992 - Psest_1718 0.85 -0.2 1,825,149 - +1.1 1,825,322 + Psest_1719 0.15 +0.4 1,825,639 - Psest_1719 0.33 +0.1 1,825,833 + Psest_1719 0.44 +1.1 1,826,223 + Psest_1719 0.66 -1.1 1,826,224 - Psest_1719 0.66 +3.0 1,826,224 - Psest_1719 0.66 +2.0 1,826,247 + Psest_1719 0.67 +1.7 1,826,247 + Psest_1719 0.67 -0.7 1,826,248 - Psest_1719 0.67 +0.5 1,826,248 - Psest_1719 0.67 -0.2 1,826,248 - Psest_1719 0.67 +0.4 1,826,248 - Psest_1719 0.67 -0.7 1,826,248 - Psest_1719 0.67 +0.3 1,826,248 - Psest_1719 0.67 +1.5 1,826,248 - Psest_1719 0.67 +0.7 1,826,249 + Psest_1719 0.67 +0.3 1,826,250 - Psest_1719 0.67 +2.5 1,826,250 - Psest_1719 0.67 +2.5 1,827,073 + Psest_1720 0.24 -0.2 1,827,073 + Psest_1720 0.24 +1.8 1,827,073 + Psest_1720 0.24 +1.0 1,827,073 + Psest_1720 0.24 +2.1 1,827,074 - Psest_1720 0.24 -1.1 1,827,136 - Psest_1720 0.30 -1.4 1,827,153 + Psest_1720 0.32 -0.0 1,827,251 - Psest_1720 0.41 +0.8 1,827,425 + Psest_1720 0.59 +1.0 1,827,425 + Psest_1720 0.59 -1.4 1,827,425 + Psest_1720 0.59 -0.7 1,827,426 - Psest_1720 0.59 +1.1 1,827,460 + Psest_1720 0.62 -1.0 1,827,460 + Psest_1720 0.62 -0.3 1,827,460 + Psest_1720 0.62 -0.6 1,827,460 + Psest_1720 0.62 +0.2 1,827,460 + Psest_1720 0.62 +1.9 1,827,460 + Psest_1720 0.62 +1.8 1,827,543 + Psest_1720 0.70 -0.4 1,827,543 + Psest_1720 0.70 +1.6 1,827,543 + Psest_1720 0.70 +0.6 1,827,543 + Psest_1720 0.70 +1.2 1,827,543 + Psest_1720 0.70 +0.6 1,827,543 + Psest_1720 0.70 +0.6 1,827,543 + Psest_1720 0.70 +0.8 1,827,543 + Psest_1720 0.70 +0.1 1,827,544 - Psest_1720 0.70 -0.9 1,827,544 - Psest_1720 0.70 -0.1 1,827,544 - Psest_1720 0.70 -0.0 1,827,544 - Psest_1720 0.70 -1.3 1,827,544 - Psest_1720 0.70 +1.2 1,827,544 - Psest_1720 0.70 -0.0 1,827,544 - Psest_1720 0.70 +0.7 1,827,544 - Psest_1720 0.70 -0.6 1,827,544 - Psest_1720 0.70 +0.7 1,827,544 - Psest_1720 0.70 +1.0 1,827,544 - Psest_1720 0.70 +1.8 1,827,544 - Psest_1720 0.70 +1.4 1,827,544 - Psest_1720 0.70 +0.0 1,827,544 - Psest_1720 0.70 -0.1 1,827,815 + -0.8
Or see this region's nucleotide sequence