Experiment: perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3440 and Psest_3441 overlap by 4 nucleotides Psest_3441 and Psest_3442 overlap by 4 nucleotides
Psest_3440: Psest_3440 - 16S RNA G1207 methylase RsmC, at 3,610,135 to 3,611,262
_3440
Psest_3441: Psest_3441 - Beta-lactamase class A, at 3,611,259 to 3,612,308
_3441
Psest_3442: Psest_3442 - Beta-lactamase class A, at 3,612,305 to 3,613,393
_3442
Position (kb)
3611
3612
3613 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3610.404 kb on + strand, within Psest_3440 at 3610.404 kb on + strand, within Psest_3440 at 3610.404 kb on + strand, within Psest_3440 at 3610.404 kb on + strand, within Psest_3440 at 3610.404 kb on + strand, within Psest_3440 at 3610.405 kb on - strand, within Psest_3440 at 3610.405 kb on - strand, within Psest_3440 at 3610.405 kb on - strand, within Psest_3440 at 3610.405 kb on - strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.612 kb on + strand, within Psest_3440 at 3610.613 kb on - strand, within Psest_3440 at 3610.613 kb on - strand, within Psest_3440 at 3610.613 kb on - strand, within Psest_3440 at 3610.613 kb on - strand, within Psest_3440 at 3610.613 kb on - strand, within Psest_3440 at 3610.879 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.927 kb on + strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3610.928 kb on - strand, within Psest_3440 at 3611.144 kb on + strand, within Psest_3440 at 3611.144 kb on + strand, within Psest_3440 at 3611.145 kb on - strand, within Psest_3440 at 3611.261 kb on - strand at 3611.491 kb on + strand, within Psest_3441 at 3611.617 kb on + strand, within Psest_3441 at 3611.618 kb on - strand, within Psest_3441 at 3611.618 kb on - strand, within Psest_3441 at 3611.621 kb on - strand, within Psest_3441 at 3611.629 kb on + strand, within Psest_3441 at 3611.629 kb on + strand, within Psest_3441 at 3611.629 kb on + strand, within Psest_3441 at 3611.630 kb on - strand, within Psest_3441 at 3611.783 kb on - strand, within Psest_3441 at 3611.783 kb on - strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.784 kb on + strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.785 kb on - strand, within Psest_3441 at 3611.951 kb on - strand, within Psest_3441 at 3612.060 kb on + strand, within Psest_3441 at 3612.061 kb on - strand, within Psest_3441 at 3612.103 kb on + strand, within Psest_3441 at 3612.158 kb on + strand, within Psest_3441 at 3612.159 kb on - strand, within Psest_3441 at 3612.159 kb on - strand, within Psest_3441 at 3612.159 kb on - strand, within Psest_3441 at 3612.159 kb on - strand, within Psest_3441 at 3612.159 kb on - strand, within Psest_3441 at 3612.160 kb on + strand, within Psest_3441 at 3612.160 kb on + strand, within Psest_3441 at 3612.160 kb on + strand, within Psest_3441 at 3612.160 kb on + strand, within Psest_3441 at 3612.160 kb on + strand, within Psest_3441 at 3612.161 kb on - strand, within Psest_3441 at 3612.161 kb on - strand, within Psest_3441 at 3612.161 kb on - strand, within Psest_3441 at 3612.161 kb on - strand, within Psest_3441 at 3612.161 kb on - strand, within Psest_3441 at 3612.161 kb on - strand, within Psest_3441 at 3612.161 kb on - strand, within Psest_3441 at 3612.161 kb on - strand, within Psest_3441 at 3612.469 kb on + strand, within Psest_3442 at 3612.469 kb on + strand, within Psest_3442 at 3612.469 kb on + strand, within Psest_3442 at 3612.469 kb on + strand, within Psest_3442 at 3612.470 kb on - strand, within Psest_3442 at 3612.470 kb on - strand, within Psest_3442 at 3612.470 kb on - strand, within Psest_3442 at 3612.470 kb on - strand, within Psest_3442 at 3612.470 kb on - strand, within Psest_3442 at 3612.470 kb on - strand, within Psest_3442 at 3612.576 kb on + strand, within Psest_3442 at 3612.660 kb on + strand, within Psest_3442 at 3612.660 kb on + strand, within Psest_3442 at 3612.661 kb on - strand, within Psest_3442 at 3612.661 kb on - strand, within Psest_3442 at 3612.661 kb on - strand, within Psest_3442 at 3612.673 kb on - strand, within Psest_3442 at 3612.684 kb on + strand, within Psest_3442 at 3612.685 kb on - strand, within Psest_3442 at 3612.838 kb on - strand, within Psest_3442 at 3613.053 kb on + strand, within Psest_3442 at 3613.053 kb on + strand, within Psest_3442 at 3613.158 kb on + strand, within Psest_3442 at 3613.158 kb on + strand, within Psest_3442 at 3613.158 kb on + strand, within Psest_3442 at 3613.158 kb on + strand, within Psest_3442 at 3613.159 kb on - strand, within Psest_3442 at 3613.159 kb on - strand, within Psest_3442 at 3613.159 kb on - strand, within Psest_3442 at 3613.180 kb on - strand, within Psest_3442 at 3613.180 kb on - strand, within Psest_3442 at 3613.215 kb on + strand, within Psest_3442 at 3613.215 kb on + strand, within Psest_3442 at 3613.215 kb on + strand, within Psest_3442 at 3613.215 kb on + strand, within Psest_3442 at 3613.216 kb on - strand, within Psest_3442 at 3613.216 kb on - strand, within Psest_3442 at 3613.216 kb on - strand, within Psest_3442
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 25 mM remove 3,610,404 + Psest_3440 0.24 -2.3 3,610,404 + Psest_3440 0.24 +0.3 3,610,404 + Psest_3440 0.24 -0.6 3,610,404 + Psest_3440 0.24 -0.0 3,610,404 + Psest_3440 0.24 -0.6 3,610,405 - Psest_3440 0.24 +1.1 3,610,405 - Psest_3440 0.24 +1.3 3,610,405 - Psest_3440 0.24 -0.1 3,610,405 - Psest_3440 0.24 +2.2 3,610,612 + Psest_3440 0.42 -0.1 3,610,612 + Psest_3440 0.42 +0.9 3,610,612 + Psest_3440 0.42 +1.0 3,610,612 + Psest_3440 0.42 -1.0 3,610,612 + Psest_3440 0.42 +0.5 3,610,612 + Psest_3440 0.42 +1.7 3,610,612 + Psest_3440 0.42 +0.6 3,610,612 + Psest_3440 0.42 +0.4 3,610,612 + Psest_3440 0.42 +0.1 3,610,612 + Psest_3440 0.42 -0.9 3,610,613 - Psest_3440 0.42 +0.7 3,610,613 - Psest_3440 0.42 -0.6 3,610,613 - Psest_3440 0.42 +0.4 3,610,613 - Psest_3440 0.42 -0.1 3,610,613 - Psest_3440 0.42 +0.3 3,610,879 + Psest_3440 0.66 -0.4 3,610,927 + Psest_3440 0.70 -0.3 3,610,927 + Psest_3440 0.70 -0.1 3,610,927 + Psest_3440 0.70 -1.1 3,610,927 + Psest_3440 0.70 -0.8 3,610,927 + Psest_3440 0.70 +2.6 3,610,927 + Psest_3440 0.70 +0.5 3,610,927 + Psest_3440 0.70 +0.9 3,610,927 + Psest_3440 0.70 +1.3 3,610,927 + Psest_3440 0.70 +1.6 3,610,927 + Psest_3440 0.70 -0.4 3,610,927 + Psest_3440 0.70 -1.4 3,610,927 + Psest_3440 0.70 +1.3 3,610,927 + Psest_3440 0.70 +0.0 3,610,928 - Psest_3440 0.70 -1.5 3,610,928 - Psest_3440 0.70 +1.0 3,610,928 - Psest_3440 0.70 -0.0 3,610,928 - Psest_3440 0.70 -2.0 3,610,928 - Psest_3440 0.70 +0.8 3,610,928 - Psest_3440 0.70 -0.9 3,610,928 - Psest_3440 0.70 -0.1 3,610,928 - Psest_3440 0.70 -0.5 3,610,928 - Psest_3440 0.70 +1.5 3,610,928 - Psest_3440 0.70 +0.3 3,610,928 - Psest_3440 0.70 -1.5 3,610,928 - Psest_3440 0.70 -1.7 3,611,144 + Psest_3440 0.89 -1.0 3,611,144 + Psest_3440 0.89 -1.9 3,611,145 - Psest_3440 0.90 -1.0 3,611,261 - -1.6 3,611,491 + Psest_3441 0.22 -0.8 3,611,617 + Psest_3441 0.34 +2.2 3,611,618 - Psest_3441 0.34 +0.1 3,611,618 - Psest_3441 0.34 +0.0 3,611,621 - Psest_3441 0.34 +0.7 3,611,629 + Psest_3441 0.35 -1.1 3,611,629 + Psest_3441 0.35 +2.6 3,611,629 + Psest_3441 0.35 +1.0 3,611,630 - Psest_3441 0.35 -0.8 3,611,783 - Psest_3441 0.50 +2.4 3,611,783 - Psest_3441 0.50 -1.1 3,611,784 + Psest_3441 0.50 -0.2 3,611,784 + Psest_3441 0.50 -0.2 3,611,784 + Psest_3441 0.50 +0.4 3,611,784 + Psest_3441 0.50 +0.3 3,611,784 + Psest_3441 0.50 -0.2 3,611,784 + Psest_3441 0.50 -0.1 3,611,784 + Psest_3441 0.50 +0.3 3,611,784 + Psest_3441 0.50 +1.4 3,611,784 + Psest_3441 0.50 +0.2 3,611,784 + Psest_3441 0.50 -0.3 3,611,784 + Psest_3441 0.50 -0.7 3,611,784 + Psest_3441 0.50 +1.3 3,611,785 - Psest_3441 0.50 -2.0 3,611,785 - Psest_3441 0.50 -0.1 3,611,785 - Psest_3441 0.50 +2.9 3,611,785 - Psest_3441 0.50 -0.6 3,611,785 - Psest_3441 0.50 +1.4 3,611,785 - Psest_3441 0.50 +2.8 3,611,785 - Psest_3441 0.50 +1.1 3,611,785 - Psest_3441 0.50 -0.4 3,611,785 - Psest_3441 0.50 -1.4 3,611,785 - Psest_3441 0.50 -0.4 3,611,785 - Psest_3441 0.50 +1.9 3,611,785 - Psest_3441 0.50 -0.7 3,611,785 - Psest_3441 0.50 +0.5 3,611,785 - Psest_3441 0.50 +0.9 3,611,785 - Psest_3441 0.50 -0.2 3,611,785 - Psest_3441 0.50 +0.8 3,611,951 - Psest_3441 0.66 +0.2 3,612,060 + Psest_3441 0.76 +2.6 3,612,061 - Psest_3441 0.76 +0.1 3,612,103 + Psest_3441 0.80 +2.8 3,612,158 + Psest_3441 0.86 +1.4 3,612,159 - Psest_3441 0.86 +0.0 3,612,159 - Psest_3441 0.86 +0.2 3,612,159 - Psest_3441 0.86 -0.2 3,612,159 - Psest_3441 0.86 -1.6 3,612,159 - Psest_3441 0.86 -0.8 3,612,160 + Psest_3441 0.86 +0.4 3,612,160 + Psest_3441 0.86 +1.8 3,612,160 + Psest_3441 0.86 +0.6 3,612,160 + Psest_3441 0.86 -0.4 3,612,160 + Psest_3441 0.86 +0.9 3,612,161 - Psest_3441 0.86 +0.1 3,612,161 - Psest_3441 0.86 +0.5 3,612,161 - Psest_3441 0.86 +0.4 3,612,161 - Psest_3441 0.86 -0.3 3,612,161 - Psest_3441 0.86 +1.4 3,612,161 - Psest_3441 0.86 +0.3 3,612,161 - Psest_3441 0.86 -1.2 3,612,161 - Psest_3441 0.86 +1.7 3,612,469 + Psest_3442 0.15 -0.3 3,612,469 + Psest_3442 0.15 -1.8 3,612,469 + Psest_3442 0.15 -2.2 3,612,469 + Psest_3442 0.15 -0.4 3,612,470 - Psest_3442 0.15 +0.3 3,612,470 - Psest_3442 0.15 -1.2 3,612,470 - Psest_3442 0.15 +0.6 3,612,470 - Psest_3442 0.15 -0.1 3,612,470 - Psest_3442 0.15 +0.3 3,612,470 - Psest_3442 0.15 +0.3 3,612,576 + Psest_3442 0.25 +2.8 3,612,660 + Psest_3442 0.33 +2.0 3,612,660 + Psest_3442 0.33 +0.6 3,612,661 - Psest_3442 0.33 -0.1 3,612,661 - Psest_3442 0.33 +0.5 3,612,661 - Psest_3442 0.33 -0.0 3,612,673 - Psest_3442 0.34 -0.4 3,612,684 + Psest_3442 0.35 -0.2 3,612,685 - Psest_3442 0.35 +0.7 3,612,838 - Psest_3442 0.49 +0.1 3,613,053 + Psest_3442 0.69 +0.9 3,613,053 + Psest_3442 0.69 +0.6 3,613,158 + Psest_3442 0.78 +0.8 3,613,158 + Psest_3442 0.78 -1.0 3,613,158 + Psest_3442 0.78 -2.6 3,613,158 + Psest_3442 0.78 -0.7 3,613,159 - Psest_3442 0.78 -0.3 3,613,159 - Psest_3442 0.78 -0.9 3,613,159 - Psest_3442 0.78 +1.7 3,613,180 - Psest_3442 0.80 +3.0 3,613,180 - Psest_3442 0.80 -1.6 3,613,215 + Psest_3442 0.84 +0.6 3,613,215 + Psest_3442 0.84 -1.6 3,613,215 + Psest_3442 0.84 +1.1 3,613,215 + Psest_3442 0.84 -1.5 3,613,216 - Psest_3442 0.84 +1.8 3,613,216 - Psest_3442 0.84 +0.5 3,613,216 - Psest_3442 0.84 -0.5
Or see this region's nucleotide sequence