Experiment: perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2226 and Psest_2227 are separated by 40 nucleotides Psest_2227 and Psest_2228 overlap by 1 nucleotides
Psest_2226: Psest_2226 - Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily, at 2,374,969 to 2,377,005
_2226
Psest_2227: Psest_2227 - hypothetical protein, at 2,377,046 to 2,377,663
_2227
Psest_2228: Psest_2228 - hypothetical protein, at 2,377,663 to 2,378,958
_2228
Position (kb)
2377
2378 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2376.240 kb on - strand, within Psest_2226 at 2376.240 kb on - strand, within Psest_2226 at 2376.296 kb on + strand, within Psest_2226 at 2376.662 kb on + strand, within Psest_2226 at 2376.663 kb on - strand, within Psest_2226 at 2376.663 kb on - strand, within Psest_2226 at 2376.668 kb on + strand, within Psest_2226 at 2376.669 kb on - strand, within Psest_2226 at 2376.689 kb on + strand, within Psest_2226 at 2376.689 kb on + strand, within Psest_2226 at 2376.689 kb on + strand, within Psest_2226 at 2376.689 kb on + strand, within Psest_2226 at 2376.689 kb on + strand, within Psest_2226 at 2376.690 kb on - strand, within Psest_2226 at 2376.690 kb on - strand, within Psest_2226 at 2376.690 kb on - strand, within Psest_2226 at 2376.690 kb on - strand, within Psest_2226 at 2376.881 kb on - strand at 2376.975 kb on - strand at 2377.019 kb on + strand at 2377.020 kb on - strand at 2377.031 kb on - strand at 2377.109 kb on - strand, within Psest_2227 at 2377.109 kb on - strand, within Psest_2227 at 2377.176 kb on + strand, within Psest_2227 at 2377.177 kb on - strand, within Psest_2227 at 2377.177 kb on - strand, within Psest_2227 at 2377.177 kb on - strand, within Psest_2227 at 2377.177 kb on - strand, within Psest_2227 at 2377.177 kb on - strand, within Psest_2227 at 2377.180 kb on + strand, within Psest_2227 at 2377.509 kb on + strand, within Psest_2227 at 2377.509 kb on + strand, within Psest_2227 at 2377.509 kb on + strand, within Psest_2227 at 2377.509 kb on + strand, within Psest_2227 at 2377.509 kb on + strand, within Psest_2227 at 2377.509 kb on + strand, within Psest_2227 at 2377.510 kb on - strand, within Psest_2227 at 2377.510 kb on - strand, within Psest_2227 at 2377.510 kb on - strand, within Psest_2227 at 2377.510 kb on - strand, within Psest_2227 at 2377.510 kb on - strand, within Psest_2227 at 2377.510 kb on - strand, within Psest_2227 at 2377.510 kb on - strand, within Psest_2227 at 2377.510 kb on - strand, within Psest_2227 at 2377.562 kb on + strand, within Psest_2227 at 2377.563 kb on - strand, within Psest_2227 at 2377.730 kb on + strand at 2377.770 kb on - strand at 2378.065 kb on - strand, within Psest_2228 at 2378.095 kb on - strand, within Psest_2228 at 2378.225 kb on - strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.297 kb on + strand, within Psest_2228 at 2378.298 kb on - strand, within Psest_2228 at 2378.298 kb on - strand, within Psest_2228 at 2378.298 kb on - strand, within Psest_2228 at 2378.298 kb on - strand, within Psest_2228 at 2378.369 kb on - strand, within Psest_2228 at 2378.397 kb on + strand, within Psest_2228 at 2378.462 kb on + strand, within Psest_2228 at 2378.462 kb on + strand, within Psest_2228 at 2378.462 kb on + strand, within Psest_2228 at 2378.462 kb on + strand, within Psest_2228 at 2378.463 kb on - strand, within Psest_2228 at 2378.463 kb on - strand, within Psest_2228 at 2378.513 kb on + strand, within Psest_2228 at 2378.513 kb on + strand, within Psest_2228 at 2378.513 kb on + strand, within Psest_2228 at 2378.513 kb on + strand, within Psest_2228 at 2378.514 kb on - strand, within Psest_2228 at 2378.514 kb on - strand, within Psest_2228 at 2378.514 kb on - strand, within Psest_2228 at 2378.514 kb on - strand, within Psest_2228 at 2378.572 kb on + strand, within Psest_2228 at 2378.572 kb on + strand, within Psest_2228 at 2378.572 kb on + strand, within Psest_2228 at 2378.576 kb on + strand, within Psest_2228 at 2378.576 kb on + strand, within Psest_2228 at 2378.576 kb on + strand, within Psest_2228 at 2378.576 kb on + strand, within Psest_2228 at 2378.577 kb on - strand, within Psest_2228 at 2378.577 kb on - strand, within Psest_2228 at 2378.577 kb on - strand, within Psest_2228 at 2378.577 kb on - strand, within Psest_2228 at 2378.577 kb on - strand, within Psest_2228
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 25 mM remove 2,376,240 - Psest_2226 0.62 -1.2 2,376,240 - Psest_2226 0.62 -1.9 2,376,296 + Psest_2226 0.65 -0.6 2,376,662 + Psest_2226 0.83 +0.9 2,376,663 - Psest_2226 0.83 -0.1 2,376,663 - Psest_2226 0.83 -0.6 2,376,668 + Psest_2226 0.83 -0.3 2,376,669 - Psest_2226 0.83 +0.4 2,376,689 + Psest_2226 0.84 +0.6 2,376,689 + Psest_2226 0.84 +0.7 2,376,689 + Psest_2226 0.84 -2.2 2,376,689 + Psest_2226 0.84 -2.2 2,376,689 + Psest_2226 0.84 -0.0 2,376,690 - Psest_2226 0.84 +0.2 2,376,690 - Psest_2226 0.84 -1.1 2,376,690 - Psest_2226 0.84 +0.7 2,376,690 - Psest_2226 0.84 +0.9 2,376,881 - -0.6 2,376,975 - -2.4 2,377,019 + +0.2 2,377,020 - -1.6 2,377,031 - -0.1 2,377,109 - Psest_2227 0.10 +0.5 2,377,109 - Psest_2227 0.10 -0.1 2,377,176 + Psest_2227 0.21 -0.9 2,377,177 - Psest_2227 0.21 +0.3 2,377,177 - Psest_2227 0.21 -1.3 2,377,177 - Psest_2227 0.21 +1.2 2,377,177 - Psest_2227 0.21 -2.2 2,377,177 - Psest_2227 0.21 +0.6 2,377,180 + Psest_2227 0.22 +0.1 2,377,509 + Psest_2227 0.75 -2.6 2,377,509 + Psest_2227 0.75 +1.9 2,377,509 + Psest_2227 0.75 +0.2 2,377,509 + Psest_2227 0.75 -0.5 2,377,509 + Psest_2227 0.75 -1.6 2,377,509 + Psest_2227 0.75 +0.2 2,377,510 - Psest_2227 0.75 +1.7 2,377,510 - Psest_2227 0.75 +0.1 2,377,510 - Psest_2227 0.75 +2.7 2,377,510 - Psest_2227 0.75 +0.4 2,377,510 - Psest_2227 0.75 +2.8 2,377,510 - Psest_2227 0.75 +1.2 2,377,510 - Psest_2227 0.75 +3.1 2,377,510 - Psest_2227 0.75 +1.1 2,377,562 + Psest_2227 0.83 -0.2 2,377,563 - Psest_2227 0.84 -2.1 2,377,730 + -1.4 2,377,770 - +0.2 2,378,065 - Psest_2228 0.31 +0.7 2,378,095 - Psest_2228 0.33 +1.1 2,378,225 - Psest_2228 0.43 +0.3 2,378,297 + Psest_2228 0.49 +1.4 2,378,297 + Psest_2228 0.49 -0.4 2,378,297 + Psest_2228 0.49 +0.6 2,378,297 + Psest_2228 0.49 -0.7 2,378,297 + Psest_2228 0.49 +0.6 2,378,297 + Psest_2228 0.49 +1.1 2,378,297 + Psest_2228 0.49 +1.5 2,378,297 + Psest_2228 0.49 +1.9 2,378,297 + Psest_2228 0.49 -1.0 2,378,298 - Psest_2228 0.49 -0.5 2,378,298 - Psest_2228 0.49 -1.3 2,378,298 - Psest_2228 0.49 -0.6 2,378,298 - Psest_2228 0.49 +0.2 2,378,369 - Psest_2228 0.54 -0.3 2,378,397 + Psest_2228 0.57 -1.7 2,378,462 + Psest_2228 0.62 -1.3 2,378,462 + Psest_2228 0.62 -0.7 2,378,462 + Psest_2228 0.62 -0.4 2,378,462 + Psest_2228 0.62 +0.4 2,378,463 - Psest_2228 0.62 -0.2 2,378,463 - Psest_2228 0.62 -0.9 2,378,513 + Psest_2228 0.66 -1.1 2,378,513 + Psest_2228 0.66 +0.1 2,378,513 + Psest_2228 0.66 +0.3 2,378,513 + Psest_2228 0.66 -0.5 2,378,514 - Psest_2228 0.66 +1.7 2,378,514 - Psest_2228 0.66 -0.8 2,378,514 - Psest_2228 0.66 +1.6 2,378,514 - Psest_2228 0.66 +0.2 2,378,572 + Psest_2228 0.70 +0.7 2,378,572 + Psest_2228 0.70 +0.7 2,378,572 + Psest_2228 0.70 +0.4 2,378,576 + Psest_2228 0.70 -0.6 2,378,576 + Psest_2228 0.70 -0.2 2,378,576 + Psest_2228 0.70 -1.0 2,378,576 + Psest_2228 0.70 -0.9 2,378,577 - Psest_2228 0.71 +1.4 2,378,577 - Psest_2228 0.71 -1.1 2,378,577 - Psest_2228 0.71 -1.1 2,378,577 - Psest_2228 0.71 -1.6 2,378,577 - Psest_2228 0.71 -0.8
Or see this region's nucleotide sequence