Experiment: perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2579 and Psest_2580 are separated by 69 nucleotides Psest_2580 and Psest_2581 are separated by 98 nucleotides Psest_2581 and Psest_2582 overlap by 17 nucleotides
Psest_2579: Psest_2579 - amidophosphoribosyltransferase, at 2,759,203 to 2,760,708
_2579
Psest_2580: Psest_2580 - Uncharacterized membrane protein, required for colicin V production, at 2,760,778 to 2,761,323
_2580
Psest_2581: Psest_2581 - Uncharacterized protein conserved in bacteria, at 2,761,422 to 2,762,054
_2581
Psest_2582: Psest_2582 - folylpolyglutamate synthase/dihydrofolate synthase, at 2,762,038 to 2,763,342
_2582
Position (kb)
2761
2762
2763 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2760.443 kb on + strand, within Psest_2579 at 2760.646 kb on - strand at 2760.656 kb on + strand at 2760.657 kb on - strand at 2760.657 kb on - strand at 2760.726 kb on + strand at 2760.726 kb on + strand at 2760.727 kb on - strand at 2760.727 kb on - strand at 2760.727 kb on - strand at 2760.727 kb on - strand at 2760.727 kb on - strand at 2760.730 kb on - strand at 2760.744 kb on + strand at 2760.895 kb on + strand, within Psest_2580 at 2760.895 kb on + strand, within Psest_2580 at 2760.895 kb on + strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2760.896 kb on - strand, within Psest_2580 at 2761.122 kb on - strand, within Psest_2580 at 2761.122 kb on - strand, within Psest_2580 at 2761.122 kb on - strand, within Psest_2580 at 2761.544 kb on + strand, within Psest_2581 at 2761.545 kb on - strand, within Psest_2581 at 2761.564 kb on + strand, within Psest_2581 at 2761.565 kb on - strand, within Psest_2581 at 2761.565 kb on - strand, within Psest_2581 at 2761.573 kb on + strand, within Psest_2581
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 25 mM remove 2,760,443 + Psest_2579 0.82 -0.1 2,760,646 - -1.0 2,760,656 + +2.7 2,760,657 - +1.4 2,760,657 - +2.8 2,760,726 + +3.5 2,760,726 + +0.4 2,760,727 - -0.9 2,760,727 - +0.3 2,760,727 - -0.1 2,760,727 - +1.5 2,760,727 - -0.8 2,760,730 - +0.1 2,760,744 + -0.8 2,760,895 + Psest_2580 0.21 -1.6 2,760,895 + Psest_2580 0.21 -0.1 2,760,895 + Psest_2580 0.21 +2.2 2,760,896 - Psest_2580 0.22 -0.5 2,760,896 - Psest_2580 0.22 +0.4 2,760,896 - Psest_2580 0.22 +2.9 2,760,896 - Psest_2580 0.22 -2.1 2,760,896 - Psest_2580 0.22 -1.1 2,760,896 - Psest_2580 0.22 -1.2 2,760,896 - Psest_2580 0.22 -1.5 2,760,896 - Psest_2580 0.22 -0.8 2,760,896 - Psest_2580 0.22 -0.6 2,760,896 - Psest_2580 0.22 +1.8 2,761,122 - Psest_2580 0.63 +0.6 2,761,122 - Psest_2580 0.63 +1.8 2,761,122 - Psest_2580 0.63 +0.8 2,761,544 + Psest_2581 0.19 +1.9 2,761,545 - Psest_2581 0.19 -1.6 2,761,564 + Psest_2581 0.22 +1.2 2,761,565 - Psest_2581 0.23 +0.7 2,761,565 - Psest_2581 0.23 -0.5 2,761,573 + Psest_2581 0.24 +1.4
Or see this region's nucleotide sequence