Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2931

Experiment: perchlorate 12.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	perchlorate 12.5 mM
3,125,571	+		Psest_2930	0.55	+0.6
3,125,572	-		Psest_2930	0.55	+0.7
3,125,709	+		Psest_2930	0.62	+0.2
3,125,709	+		Psest_2930	0.62	-0.4
3,125,709	+		Psest_2930	0.62	-2.2
3,125,710	-		Psest_2930	0.62	-0.4
3,125,710	-		Psest_2930	0.62	+0.8
3,125,710	-		Psest_2930	0.62	-0.1
3,125,710	-		Psest_2930	0.62	-0.5
3,125,710	-		Psest_2930	0.62	-0.6
3,125,710	-		Psest_2930	0.62	-0.2
3,125,835	+		Psest_2930	0.69	+0.7
3,125,836	-		Psest_2930	0.69	-1.0
3,125,862	+		Psest_2930	0.70	-0.8
3,125,871	+		Psest_2930	0.71	+1.4
3,125,871	+		Psest_2930	0.71	-1.6
3,125,872	-		Psest_2930	0.71	+2.2
3,126,141	+		Psest_2930	0.85	+1.7
3,126,141	+		Psest_2930	0.85	-0.9
3,126,141	+		Psest_2930	0.85	-0.2
3,126,141	+		Psest_2930	0.85	-1.4
3,126,141	+		Psest_2930	0.85	-0.5
3,126,141	+		Psest_2930	0.85	+0.5
3,126,141	+		Psest_2930	0.85	+0.1
3,126,142	-		Psest_2930	0.85	-1.8
3,126,142	-		Psest_2930	0.85	+0.1
3,126,142	-		Psest_2930	0.85	-0.1
3,126,142	-		Psest_2930	0.85	+1.0
3,126,142	-		Psest_2930	0.85	+0.1
3,126,142	-		Psest_2930	0.85	+1.1
3,126,142	-		Psest_2930	0.85	+0.5
3,126,204	+		Psest_2930	0.89	+0.2
3,126,204	+		Psest_2930	0.89	+0.6
3,126,205	-		Psest_2930	0.89	+0.7
3,126,205	-		Psest_2930	0.89	+1.2
3,126,297	+				+1.7
3,126,297	+				-1.9
3,126,297	+				-0.7
3,126,394	+				+0.2
3,126,394	+				-0.3
3,126,394	+				+1.1
3,126,394	+				-1.1
3,126,394	+				+2.3
3,126,394	+				-0.9
3,126,394	+				+1.4
3,126,394	+				+0.1
3,126,394	+				-1.6
3,126,395	-				-0.0
3,126,395	-				+0.1
3,126,395	-				-0.8
3,126,395	-				+1.0
3,126,395	-				+2.4
3,126,395	-				-0.0
3,126,418	-				-0.1
3,126,420	+				-2.1
3,126,420	+				-1.1
3,126,420	+				+1.1
3,126,420	+				+1.8
3,126,421	-				+1.3
3,126,537	+				-3.2
3,126,537	+				-1.6
3,126,537	+				-0.4
3,126,537	+				+0.2
3,126,537	+				-1.6
3,126,537	+				-1.8
3,126,538	-				-0.7
3,126,538	-				-1.2
3,126,538	-				+0.7
3,126,538	-				-0.4
3,126,611	-				+0.0
3,126,611	-				+0.3
3,126,713	-				+0.8
3,126,713	-				-1.0
3,126,781	+		Psest_2931	0.13	-0.2
3,126,781	+		Psest_2931	0.13	-0.4
3,126,781	+		Psest_2931	0.13	-0.2
3,126,781	+		Psest_2931	0.13	-2.4
3,126,781	+		Psest_2931	0.13	+0.7
3,126,781	+		Psest_2931	0.13	-2.0
3,126,781	+		Psest_2931	0.13	+0.1
3,126,781	+		Psest_2931	0.13	-0.7
3,126,781	+		Psest_2931	0.13	+0.5
3,126,782	-		Psest_2931	0.13	-0.7
3,126,782	-		Psest_2931	0.13	+0.9
3,126,782	-		Psest_2931	0.13	-0.8
3,126,782	-		Psest_2931	0.13	-1.0
3,126,812	-		Psest_2931	0.15	-1.9
3,126,812	-		Psest_2931	0.15	-1.5
3,126,812	-		Psest_2931	0.15	-0.8
3,127,119	+		Psest_2931	0.32	+1.0
3,127,201	+		Psest_2931	0.37	-0.4
3,127,201	+		Psest_2931	0.37	-1.3
3,127,201	+		Psest_2931	0.37	-0.9
3,127,201	+		Psest_2931	0.37	+0.7
3,127,201	+		Psest_2931	0.37	-0.2
3,127,201	+		Psest_2931	0.37	-0.7
3,127,201	+		Psest_2931	0.37	-0.4
3,127,201	+		Psest_2931	0.37	-1.8
3,127,201	+		Psest_2931	0.37	-0.4
3,127,201	+		Psest_2931	0.37	+1.6
3,127,201	+		Psest_2931	0.37	+0.4
3,127,201	+		Psest_2931	0.37	+1.5
3,127,201	+		Psest_2931	0.37	+0.6
3,127,201	+		Psest_2931	0.37	-0.2
3,127,202	-		Psest_2931	0.37	+0.1
3,127,202	-		Psest_2931	0.37	-0.3
3,127,202	-		Psest_2931	0.37	-1.7
3,127,202	-		Psest_2931	0.37	-0.8
3,127,202	-		Psest_2931	0.37	+0.8
3,127,202	-		Psest_2931	0.37	-0.9
3,127,202	-		Psest_2931	0.37	-1.3
3,127,202	-		Psest_2931	0.37	+0.7
3,127,202	-		Psest_2931	0.37	-0.0
3,127,202	-		Psest_2931	0.37	+0.9
3,127,202	-		Psest_2931	0.37	-0.3
3,127,202	-		Psest_2931	0.37	-0.7
3,127,202	-		Psest_2931	0.37	+0.1
3,127,202	-		Psest_2931	0.37	-0.3
3,127,202	-		Psest_2931	0.37	-0.3
3,127,202	-		Psest_2931	0.37	-0.8
3,127,202	-		Psest_2931	0.37	-0.8
3,127,202	-		Psest_2931	0.37	-0.3
3,127,202	-		Psest_2931	0.37	-1.4
3,127,202	-		Psest_2931	0.37	-1.2
3,127,202	-		Psest_2931	0.37	-1.1
3,127,203	+		Psest_2931	0.37	-1.0
3,127,204	-		Psest_2931	0.37	+0.3
3,127,204	-		Psest_2931	0.37	+1.6
3,127,204	-		Psest_2931	0.37	+0.9
3,127,222	+		Psest_2931	0.38	-0.0
3,127,223	-		Psest_2931	0.38	+3.4
3,127,703	+		Psest_2931	0.66	-0.5
3,127,703	+		Psest_2931	0.66	-1.4
3,127,704	-		Psest_2931	0.66	+0.6
3,127,721	+		Psest_2931	0.67	-0.2
3,127,721	+		Psest_2931	0.67	-0.7
3,127,721	+		Psest_2931	0.67	-0.7
3,127,839	-		Psest_2931	0.74	+0.3
3,127,839	-		Psest_2931	0.74	+0.6
3,128,004	-		Psest_2931	0.83	-0.3
3,128,004	-		Psest_2931	0.83	+1.6
3,128,162	+				+1.3
3,128,188	+				+0.7
3,128,188	+				+1.1
3,128,188	+				-0.8
3,128,189	-				+1.3
3,128,189	-				-1.3
3,128,189	-				-2.2
3,128,363	+				-0.9
3,128,363	+				+1.0
3,128,363	+				+0.7
3,128,364	-				+1.9
3,128,364	-				+0.9
3,128,364	-				+1.8
3,128,364	-				-0.8
3,128,364	-				+0.1
3,128,448	+				+0.4
3,128,449	-				-1.9
3,128,449	-				-0.0
3,128,449	-				-0.0
3,128,449	-				+0.6
3,128,449	-				-1.0
3,128,521	-				+0.6
3,128,701	+		Psest_2932	0.24	-0.7
3,128,702	-		Psest_2932	0.24	-0.4
3,128,871	+		Psest_2932	0.38	+0.5
3,128,872	-		Psest_2932	0.38	+0.8
3,128,877	+		Psest_2932	0.38	+0.6
3,128,877	+		Psest_2932	0.38	+0.1
3,128,877	+		Psest_2932	0.38	-1.5
3,128,878	-		Psest_2932	0.38	+2.3
3,128,878	-		Psest_2932	0.38	-2.3
3,128,878	-		Psest_2932	0.38	-1.8
3,128,878	-		Psest_2932	0.38	-0.4
3,128,878	-		Psest_2932	0.38	-0.3
3,128,964	+		Psest_2932	0.46	-1.2
3,128,964	+		Psest_2932	0.46	+1.3
3,128,965	-		Psest_2932	0.46	+0.0
3,128,965	-		Psest_2932	0.46	-0.4
3,128,967	-		Psest_2932	0.46	-0.1
3,128,967	-		Psest_2932	0.46	-0.6
3,128,967	-		Psest_2932	0.46	-0.9