Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3347

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
3,513,209	+		Psest_3346	0.67	-0.8
3,513,210	-		Psest_3346	0.67	-0.3
3,513,210	-		Psest_3346	0.67	+0.3
3,513,210	-		Psest_3346	0.67	-0.5
3,513,393	+		Psest_3346	0.76	-1.7
3,513,393	+		Psest_3346	0.76	-1.6
3,513,394	-		Psest_3346	0.76	-0.6
3,513,394	-		Psest_3346	0.76	-2.3
3,513,503	+		Psest_3346	0.81	-0.6
3,513,503	+		Psest_3346	0.81	-1.5
3,513,503	+		Psest_3346	0.81	+0.1
3,513,504	-		Psest_3346	0.81	+1.7
3,513,504	-		Psest_3346	0.81	-0.5
3,513,523	+		Psest_3346	0.82	-2.5
3,513,523	+		Psest_3346	0.82	-0.4
3,513,523	+		Psest_3346	0.82	+0.5
3,513,523	+		Psest_3346	0.82	+0.0
3,513,523	+		Psest_3346	0.82	-0.2
3,513,523	+		Psest_3346	0.82	-0.6
3,513,524	-		Psest_3346	0.82	+1.9
3,513,524	-		Psest_3346	0.82	+0.4
3,513,524	-		Psest_3346	0.82	-0.6
3,513,524	-		Psest_3346	0.82	-1.1
3,513,524	-		Psest_3346	0.82	-2.2
3,513,525	+		Psest_3346	0.82	-0.9
3,513,525	+		Psest_3346	0.82	-1.1
3,513,525	+		Psest_3346	0.82	+3.0
3,513,525	+		Psest_3346	0.82	-0.4
3,513,525	+		Psest_3346	0.82	+0.1
3,513,525	+		Psest_3346	0.82	-1.9
3,513,525	+		Psest_3346	0.82	+3.8
3,513,525	+		Psest_3346	0.82	+0.0
3,513,526	-		Psest_3346	0.82	+1.2
3,513,526	-		Psest_3346	0.82	+2.3
3,513,526	-		Psest_3346	0.82	+3.8
3,513,526	-		Psest_3346	0.82	-1.1
3,513,526	-		Psest_3346	0.82	-0.1
3,513,527	+		Psest_3346	0.82	+0.8
3,513,527	+		Psest_3346	0.82	+1.2
3,513,528	-		Psest_3346	0.82	+2.0
3,513,528	-		Psest_3346	0.82	+1.6
3,513,528	-		Psest_3346	0.82	-0.6
3,513,528	-		Psest_3346	0.82	+0.7
3,513,528	-		Psest_3346	0.82	+2.4
3,513,528	-		Psest_3346	0.82	+1.0
3,513,528	-		Psest_3346	0.82	+0.4
3,513,528	-		Psest_3346	0.82	+0.1
3,513,528	-		Psest_3346	0.82	-2.1
3,513,528	-		Psest_3346	0.82	+2.7
3,513,528	-		Psest_3346	0.82	-0.8
3,513,528	-		Psest_3346	0.82	-1.1
3,513,528	-		Psest_3346	0.82	-0.9
3,513,528	-		Psest_3346	0.82	+1.1
3,513,528	-		Psest_3346	0.82	+1.3
3,513,540	+		Psest_3346	0.83	-3.0
3,513,540	+		Psest_3346	0.83	+0.4
3,513,540	+		Psest_3346	0.83	+0.8
3,513,541	-		Psest_3346	0.83	+0.9
3,513,541	-		Psest_3346	0.83	+0.9
3,513,590	-		Psest_3346	0.85	+0.4
3,513,590	-		Psest_3346	0.85	-1.1
3,513,600	-		Psest_3346	0.86	-1.6
3,513,655	-		Psest_3346	0.88	+0.8
3,513,786	+				+0.0
3,514,019	-				+0.7
3,514,027	+				-0.5
3,514,027	+				-2.4
3,514,027	+				-0.6
3,514,027	+				+1.4
3,514,114	+				-0.3
3,514,115	-				-3.4
3,514,250	+				+1.5
3,514,250	+				-2.8
3,514,251	-				+2.9
3,514,265	+				+1.0
3,514,265	+				-0.5
3,514,265	+				+2.7
3,514,352	+				-0.4
3,514,352	+				+0.7
3,514,353	-				+2.3
3,514,403	+				+1.7
3,514,403	+				+3.7
3,514,403	+				-0.4
3,514,403	+				+2.9
3,514,403	+				-3.3
3,514,403	+				+2.2
3,514,404	-				+0.5
3,514,404	-				-0.4
3,514,404	-				+0.6
3,514,404	-				+1.3
3,514,404	-				+0.6
3,514,404	-				-2.2
3,514,404	-				+1.6
3,514,404	-				-3.1
3,514,404	-				+0.6
3,514,404	-				+0.7
3,514,445	+		Psest_3347	0.12	+1.6
3,514,445	+		Psest_3347	0.12	-0.6
3,514,445	+		Psest_3347	0.12	-0.6
3,514,445	+		Psest_3347	0.12	-1.5
3,514,445	+		Psest_3347	0.12	+3.2
3,514,445	+		Psest_3347	0.12	+0.8
3,514,445	+		Psest_3347	0.12	-0.5
3,514,445	+		Psest_3347	0.12	-0.5
3,514,445	+		Psest_3347	0.12	-1.3
3,514,445	+		Psest_3347	0.12	+1.4
3,514,445	+		Psest_3347	0.12	-0.3
3,514,445	+		Psest_3347	0.12	+0.3
3,514,446	-		Psest_3347	0.12	+0.2
3,514,446	-		Psest_3347	0.12	+1.8
3,514,446	-		Psest_3347	0.12	-1.1
3,514,446	-		Psest_3347	0.12	+2.1
3,514,446	-		Psest_3347	0.12	+0.7
3,514,446	-		Psest_3347	0.12	-1.9
3,514,446	-		Psest_3347	0.12	-2.9
3,514,446	-		Psest_3347	0.12	-1.5
3,514,446	-		Psest_3347	0.12	+0.9
3,514,446	-		Psest_3347	0.12	+0.7
3,514,502	+		Psest_3347	0.14	-1.3
3,514,503	-		Psest_3347	0.14	-1.1
3,514,503	-		Psest_3347	0.14	+1.9
3,514,503	-		Psest_3347	0.14	-2.5
3,514,517	+		Psest_3347	0.15	-1.0
3,514,517	+		Psest_3347	0.15	-0.3
3,514,517	+		Psest_3347	0.15	-0.1
3,514,518	-		Psest_3347	0.15	-0.9
3,514,580	+		Psest_3347	0.18	-0.7
3,514,580	+		Psest_3347	0.18	-0.7
3,514,580	+		Psest_3347	0.18	-1.5
3,514,581	-		Psest_3347	0.18	+1.3
3,514,581	-		Psest_3347	0.18	+1.1
3,514,581	-		Psest_3347	0.18	-0.2
3,514,581	-		Psest_3347	0.18	-0.5
3,514,586	+		Psest_3347	0.18	+1.3
3,514,586	+		Psest_3347	0.18	-2.1
3,514,586	+		Psest_3347	0.18	+1.7
3,514,586	+		Psest_3347	0.18	+0.2
3,514,587	-		Psest_3347	0.18	-0.2
3,514,587	-		Psest_3347	0.18	-0.3
3,514,587	-		Psest_3347	0.18	-0.3
3,514,781	+		Psest_3347	0.26	+1.4
3,514,781	+		Psest_3347	0.26	+0.7
3,514,781	+		Psest_3347	0.26	-0.7
3,514,781	+		Psest_3347	0.26	+0.8
3,514,781	+		Psest_3347	0.26	+0.1
3,514,785	+		Psest_3347	0.27	+0.0
3,514,786	-		Psest_3347	0.27	+1.0
3,514,889	+		Psest_3347	0.31	+0.6
3,514,890	-		Psest_3347	0.31	+1.0
3,514,934	+		Psest_3347	0.33	+1.6
3,514,935	-		Psest_3347	0.33	-0.5
3,514,935	-		Psest_3347	0.33	+0.6
3,514,970	-		Psest_3347	0.35	+0.6
3,515,075	+		Psest_3347	0.39	-1.9
3,515,075	+		Psest_3347	0.39	-0.9
3,515,076	-		Psest_3347	0.40	-0.7
3,515,076	-		Psest_3347	0.40	+0.4
3,515,076	-		Psest_3347	0.40	-0.7
3,515,202	+		Psest_3347	0.45	+0.5
3,515,237	+		Psest_3347	0.47	-1.1
3,515,237	+		Psest_3347	0.47	+0.3
3,515,237	+		Psest_3347	0.47	+0.2
3,515,237	+		Psest_3347	0.47	+1.0
3,515,238	-		Psest_3347	0.47	-1.1
3,515,238	-		Psest_3347	0.47	+1.1
3,515,238	-		Psest_3347	0.47	-0.3
3,515,238	-		Psest_3347	0.47	-0.1
3,515,435	+		Psest_3347	0.55	-0.8
3,515,435	+		Psest_3347	0.55	-0.4
3,515,435	+		Psest_3347	0.55	+3.0
3,515,435	+		Psest_3347	0.55	-1.1
3,515,435	+		Psest_3347	0.55	+1.4
3,515,436	-		Psest_3347	0.55	-1.9
3,515,436	-		Psest_3347	0.55	+0.1
3,515,436	-		Psest_3347	0.55	-0.1
3,515,436	-		Psest_3347	0.55	-0.4
3,515,436	-		Psest_3347	0.55	+0.6
3,515,457	+		Psest_3347	0.56	-0.3
3,515,562	-		Psest_3347	0.61	-1.2
3,515,562	-		Psest_3347	0.61	-0.1
3,515,562	-		Psest_3347	0.61	-2.0
3,515,562	-		Psest_3347	0.61	+0.1
3,515,666	+		Psest_3347	0.66	-1.0
3,515,666	+		Psest_3347	0.66	+1.2
3,515,667	-		Psest_3347	0.66	+1.6
3,515,667	-		Psest_3347	0.66	+0.5
3,515,669	+		Psest_3347	0.66	+1.2
3,515,670	-		Psest_3347	0.66	-1.1
3,515,670	-		Psest_3347	0.66	-0.0
3,515,670	-		Psest_3347	0.66	-0.9
3,515,948	+		Psest_3347	0.78	-0.2
3,515,949	-		Psest_3347	0.78	+0.8
3,516,117	+		Psest_3347	0.86	+1.0
3,516,117	+		Psest_3347	0.86	-1.5
3,516,118	-		Psest_3347	0.86	-0.6
3,516,118	-		Psest_3347	0.86	-2.6
3,516,175	+		Psest_3347	0.88	+3.2
3,516,175	+		Psest_3347	0.88	+0.7
3,516,175	+		Psest_3347	0.88	+0.8
3,516,176	-		Psest_3347	0.88	-0.3
3,516,231	-				-1.1
3,516,231	-				-0.4
3,516,250	-				-2.0
3,516,260	+				+2.1
3,516,260	+				+2.6
3,516,260	+				-1.3
3,516,260	+				-0.6
3,516,260	+				-0.6
3,516,260	+				+2.6
3,516,260	+				-2.8
3,516,260	+				+0.6
3,516,261	-				+0.0
3,516,261	-				+0.3
3,516,261	-				-0.2
3,516,261	-				+1.5
3,516,261	-				+0.1
3,516,261	-				+0.5
3,516,261	-				-0.3
3,516,425	-				+1.4
3,516,443	+				-1.3
3,516,443	+				+0.1
3,516,443	+				+3.0
3,516,443	+				-0.4
3,516,443	+				-1.5
3,516,443	+				-0.5
3,516,443	+				-1.9
3,516,443	+				+2.6
3,516,443	+				-0.2
3,516,443	+				+0.1
3,516,443	+				-0.7
3,516,444	-				-0.5
3,516,444	-				+2.0
3,516,444	-				+0.1
3,516,444	-				+1.8
3,516,444	-				-2.4
3,516,444	-				+1.0
3,516,444	-				-1.9
3,516,444	-				-1.3
3,516,444	-				-0.1
3,516,444	-				-1.2
3,516,444	-				-1.6
3,516,444	-				+1.1
3,516,444	-				+0.2
3,516,444	-				+0.3
3,516,444	-				-1.0
3,516,486	-				+0.1
3,516,588	+				+1.1
3,516,588	+				+1.7
3,516,588	+				-0.9
3,516,589	-				+0.1
3,516,589	-				-1.5
3,516,589	-				-1.2
3,516,747	+		Psest_3348	0.24	-1.1
3,516,747	+		Psest_3348	0.24	+0.6
3,516,840	-		Psest_3348	0.38	-3.5
3,516,840	-		Psest_3348	0.38	+2.8
3,516,863	+		Psest_3348	0.41	-1.4
3,516,960	-		Psest_3348	0.56	-1.5
3,516,960	-		Psest_3348	0.56	-3.3
3,516,992	+		Psest_3348	0.60	-1.2
3,516,992	+		Psest_3348	0.60	+1.7
3,516,992	+		Psest_3348	0.60	+3.9
3,516,992	+		Psest_3348	0.60	-1.2
3,516,992	+		Psest_3348	0.60	+1.0
3,516,992	+		Psest_3348	0.60	+0.5
3,516,992	+		Psest_3348	0.60	-0.6
3,516,992	+		Psest_3348	0.60	-0.3
3,516,993	-		Psest_3348	0.60	-0.6
3,516,993	-		Psest_3348	0.60	+2.1
3,516,993	-		Psest_3348	0.60	+0.3
3,516,993	-		Psest_3348	0.60	-1.0
3,516,993	-		Psest_3348	0.60	-0.1
3,517,226	+				-0.6
3,517,226	+				-0.4
3,517,226	+				+1.3
3,517,227	-				+3.5
3,517,227	-				-0.6
3,517,227	-				-1.1