Strain Fitness in Pantoea sp. MT58 around IAI47_09745

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,060,942	-		IAI47_09740	0.32	+1.2
2,060,997	+		IAI47_09740	0.36	-1.1
2,061,014	-		IAI47_09740	0.38	-1.1
2,061,104	+		IAI47_09740	0.45	+1.9
2,061,104	+		IAI47_09740	0.45	-0.1
2,061,104	+		IAI47_09740	0.45	+0.3
2,061,104	+		IAI47_09740	0.45	+0.5
2,061,105	-		IAI47_09740	0.45	+0.9
2,061,105	-		IAI47_09740	0.45	-0.5
2,061,105	-		IAI47_09740	0.45	+0.4
2,061,108	+		IAI47_09740	0.45	-0.8
2,061,108	+		IAI47_09740	0.45	-1.0
2,061,109	-		IAI47_09740	0.45	+1.3
2,061,109	-		IAI47_09740	0.45	+1.7
2,061,116	+		IAI47_09740	0.46	+0.6
2,061,207	+		IAI47_09740	0.53	+0.4
2,061,279	+		IAI47_09740	0.59	-0.1
2,061,287	+		IAI47_09740	0.60	+0.9
2,061,296	+		IAI47_09740	0.60	+0.1
2,061,296	+		IAI47_09740	0.60	+0.4
2,061,296	+		IAI47_09740	0.60	-1.2
2,061,298	+		IAI47_09740	0.61	+0.6
2,061,298	+		IAI47_09740	0.61	+0.3
2,061,298	+		IAI47_09740	0.61	+0.9
2,061,298	+		IAI47_09740	0.61	+0.5
2,061,298	+		IAI47_09740	0.61	-1.4
2,061,298	+		IAI47_09740	0.61	+0.2
2,061,298	+		IAI47_09740	0.61	+0.2
2,061,298	+		IAI47_09740	0.61	-1.1
2,061,298	+		IAI47_09740	0.61	+0.8
2,061,298	+		IAI47_09740	0.61	+0.1
2,061,298	+		IAI47_09740	0.61	+0.0
2,061,298	+		IAI47_09740	0.61	+0.1
2,061,298	+		IAI47_09740	0.61	+0.3
2,061,299	-		IAI47_09740	0.61	-0.7
2,061,299	-		IAI47_09740	0.61	+1.7
2,061,299	-		IAI47_09740	0.61	+0.5
2,061,299	-		IAI47_09740	0.61	+0.5
2,061,299	-		IAI47_09740	0.61	-0.2
2,061,299	-		IAI47_09740	0.61	-1.0
2,061,299	-		IAI47_09740	0.61	-0.7
2,061,299	-		IAI47_09740	0.61	+0.4
2,061,299	-		IAI47_09740	0.61	+1.1
2,061,299	-		IAI47_09740	0.61	+1.2
2,061,299	-		IAI47_09740	0.61	+0.9
2,061,299	-		IAI47_09740	0.61	-2.2
2,061,333	+		IAI47_09740	0.63	+0.6
2,061,333	+		IAI47_09740	0.63	+0.4
2,061,334	-		IAI47_09740	0.63	+0.9
2,061,334	-		IAI47_09740	0.63	+3.2
2,061,334	-		IAI47_09740	0.63	-0.6
2,061,334	-		IAI47_09740	0.63	+0.2
2,061,334	-		IAI47_09740	0.63	-1.1
2,061,334	-		IAI47_09740	0.63	-0.3
2,061,334	-		IAI47_09740	0.63	+0.7
2,061,334	-		IAI47_09740	0.63	+0.0
2,061,349	+		IAI47_09740	0.65	-0.4
2,061,349	+		IAI47_09740	0.65	+0.3
2,061,349	+		IAI47_09740	0.65	+0.9
2,061,349	+		IAI47_09740	0.65	-0.7
2,061,349	+		IAI47_09740	0.65	-1.4
2,061,350	-		IAI47_09740	0.65	-1.5
2,061,350	-		IAI47_09740	0.65	+0.3
2,061,450	-		IAI47_09740	0.73	+0.0
2,061,492	-		IAI47_09740	0.76	-0.8
2,061,492	-		IAI47_09740	0.76	-1.9
2,061,634	+		IAI47_09740	0.87	-1.1
2,061,634	+		IAI47_09740	0.87	+0.2
2,061,635	-		IAI47_09740	0.87	-0.1
2,061,635	-		IAI47_09740	0.87	+0.7
2,061,689	+				-0.1
2,061,690	-				+1.2
2,061,715	+				+0.8
2,061,716	-				+0.3
2,061,777	+				+0.7
2,061,777	+				+0.7
2,061,778	-				+0.7
2,061,828	+				+0.1
2,061,828	+				+1.3
2,061,828	+				+1.9
2,061,829	-				-1.1
2,061,829	-				-1.3
2,061,829	-				-0.3
2,061,829	-				+1.5
2,061,843	-				-0.5
2,061,914	+				+0.2
2,061,914	+				+1.2
2,061,914	+				+1.9
2,061,914	+				+0.4
2,061,914	+				+0.6
2,061,915	-				+1.3
2,061,915	-				+0.7
2,061,919	+				+0.4
2,061,920	-				+0.7
2,061,939	+				+0.2
2,061,970	+				-0.2
2,061,970	+				-1.0
2,061,971	-				+0.5
2,061,999	+		IAI47_09745	0.13	+0.4
2,061,999	+		IAI47_09745	0.13	+0.9
2,061,999	+		IAI47_09745	0.13	-0.1
2,061,999	+		IAI47_09745	0.13	-0.3
2,062,000	-		IAI47_09745	0.13	-0.2
2,062,000	-		IAI47_09745	0.13	+0.7
2,062,000	-		IAI47_09745	0.13	-1.4
2,062,000	-		IAI47_09745	0.13	-1.2
2,062,000	-		IAI47_09745	0.13	+0.2
2,062,032	+		IAI47_09745	0.16	-0.7
2,062,032	+		IAI47_09745	0.16	-0.4
2,062,032	+		IAI47_09745	0.16	+0.1
2,062,032	+		IAI47_09745	0.16	-0.7
2,062,033	-		IAI47_09745	0.16	-0.1
2,062,036	+		IAI47_09745	0.17	-0.3
2,062,036	+		IAI47_09745	0.17	+0.7
2,062,036	+		IAI47_09745	0.17	-0.6
2,062,036	+		IAI47_09745	0.17	-1.7
2,062,036	+		IAI47_09745	0.17	-0.1
2,062,036	+		IAI47_09745	0.17	-0.2
2,062,036	+		IAI47_09745	0.17	-1.2
2,062,083	+		IAI47_09745	0.22	+0.3
2,062,083	+		IAI47_09745	0.22	-0.1
2,062,083	+		IAI47_09745	0.22	+1.9
2,062,084	-		IAI47_09745	0.22	+0.3
2,062,084	-		IAI47_09745	0.22	-0.1
2,062,110	+		IAI47_09745	0.25	+1.2
2,062,110	+		IAI47_09745	0.25	-0.1
2,062,111	-		IAI47_09745	0.25	-0.9
2,062,170	+		IAI47_09745	0.32	-0.4
2,062,170	+		IAI47_09745	0.32	+2.1
2,062,170	+		IAI47_09745	0.32	+1.3
2,062,170	+		IAI47_09745	0.32	+0.2
2,062,170	+		IAI47_09745	0.32	+0.1
2,062,183	+		IAI47_09745	0.33	+0.0
2,062,201	+		IAI47_09745	0.35	-0.1
2,062,258	+		IAI47_09745	0.41	+0.3
2,062,258	+		IAI47_09745	0.41	+0.7
2,062,258	+		IAI47_09745	0.41	-0.7
2,062,258	+		IAI47_09745	0.41	-0.2
2,062,258	+		IAI47_09745	0.41	-0.9
2,062,258	+		IAI47_09745	0.41	+1.5
2,062,259	-		IAI47_09745	0.42	-0.2
2,062,259	-		IAI47_09745	0.42	+0.0
2,062,259	-		IAI47_09745	0.42	-1.0
2,062,259	-		IAI47_09745	0.42	-0.7
2,062,259	-		IAI47_09745	0.42	-1.2
2,062,259	-		IAI47_09745	0.42	-1.7
2,062,259	-		IAI47_09745	0.42	+0.0
2,062,259	-		IAI47_09745	0.42	+1.2
2,062,260	+		IAI47_09745	0.42	+1.1
2,062,260	+		IAI47_09745	0.42	+0.6
2,062,260	+		IAI47_09745	0.42	-0.5
2,062,260	+		IAI47_09745	0.42	-1.0
2,062,261	-		IAI47_09745	0.42	+0.9
2,062,261	-		IAI47_09745	0.42	+0.3
2,062,261	-		IAI47_09745	0.42	+0.6
2,062,261	-		IAI47_09745	0.42	-0.1
2,062,339	+		IAI47_09745	0.51	+0.4
2,062,340	-		IAI47_09745	0.51	+1.2
2,062,340	-		IAI47_09745	0.51	-1.1
2,062,340	-		IAI47_09745	0.51	-0.1
2,062,340	-		IAI47_09745	0.51	+2.3
2,062,391	+		IAI47_09745	0.56	-0.2
2,062,392	-		IAI47_09745	0.56	-1.0
2,062,405	+		IAI47_09745	0.58	-1.5
2,062,405	+		IAI47_09745	0.58	-1.1
2,062,405	+		IAI47_09745	0.58	+0.5
2,062,406	-		IAI47_09745	0.58	+0.9
2,062,406	-		IAI47_09745	0.58	-0.3
2,062,406	-		IAI47_09745	0.58	+1.8
2,062,406	-		IAI47_09745	0.58	-0.7
2,062,406	-		IAI47_09745	0.58	+0.3
2,062,406	-		IAI47_09745	0.58	-1.9
2,062,406	-		IAI47_09745	0.58	-0.7
2,062,511	-		IAI47_09745	0.70	-1.5
2,062,532	+		IAI47_09745	0.72	+0.4
2,062,533	-		IAI47_09745	0.72	-0.9
2,062,547	+		IAI47_09745	0.74	+0.3
2,062,547	+		IAI47_09745	0.74	-0.0
2,062,547	+		IAI47_09745	0.74	+0.7
2,062,547	+		IAI47_09745	0.74	+0.1
2,062,547	+		IAI47_09745	0.74	-3.0
2,062,547	+		IAI47_09745	0.74	-0.5
2,062,547	+		IAI47_09745	0.74	+1.3
2,062,548	-		IAI47_09745	0.74	-0.7
2,062,548	-		IAI47_09745	0.74	+0.1
2,062,548	-		IAI47_09745	0.74	+0.2
2,062,548	-		IAI47_09745	0.74	+0.5
2,062,548	-		IAI47_09745	0.74	+0.1
2,062,548	-		IAI47_09745	0.74	+0.0
2,062,549	+		IAI47_09745	0.74	-1.1
2,062,549	+		IAI47_09745	0.74	+0.7
2,062,550	-		IAI47_09745	0.74	-0.2
2,062,550	-		IAI47_09745	0.74	+1.7
2,062,550	-		IAI47_09745	0.74	+0.1
2,062,550	-		IAI47_09745	0.74	+1.4
2,062,728	+				+1.3
2,062,728	+				+0.9
2,062,729	-				-0.1
2,062,729	-				-0.0
2,062,833	+				+0.9
2,062,876	+				+0.4
2,062,877	-				+0.3
2,062,881	-				-2.4
2,062,950	-				+0.0
2,062,950	-				-3.3
2,062,950	-				-1.1
2,062,972	+				+0.0
2,062,973	-				-0.5
2,062,973	-				+0.9
2,062,973	-				-1.7
2,062,973	-				+0.1
2,062,974	+				-0.4
2,062,981	+				-1.7
2,062,982	-				+0.1
2,062,992	+				-0.7
2,062,992	+				-1.0
2,063,104	-		IAI47_09750	0.16	-2.3
2,063,146	+		IAI47_09750	0.19	-1.5
2,063,146	+		IAI47_09750	0.19	-0.7
2,063,147	-		IAI47_09750	0.19	+0.6
2,063,147	-		IAI47_09750	0.19	-1.3
2,063,281	+		IAI47_09750	0.30	-1.9
2,063,281	+		IAI47_09750	0.30	-0.3
2,063,281	+		IAI47_09750	0.30	-1.7
2,063,282	-		IAI47_09750	0.30	-0.4
2,063,282	-		IAI47_09750	0.30	-1.4
2,063,293	+		IAI47_09750	0.31	-3.3
2,063,293	+		IAI47_09750	0.31	-1.0
2,063,296	+		IAI47_09750	0.32	-0.8
2,063,297	-		IAI47_09750	0.32	-1.9
2,063,360	+		IAI47_09750	0.37	-2.7
2,063,360	+		IAI47_09750	0.37	+0.9
2,063,418	+		IAI47_09750	0.42	-2.3
2,063,432	+		IAI47_09750	0.43	-1.4
2,063,649	-		IAI47_09750	0.61	-0.7
2,063,656	+		IAI47_09750	0.61	-2.0
2,063,656	+		IAI47_09750	0.61	-1.4
2,063,656	+		IAI47_09750	0.61	+0.5
2,063,657	-		IAI47_09750	0.61	-0.8
2,063,664	+		IAI47_09750	0.62	-2.4
2,063,664	+		IAI47_09750	0.62	+0.9
2,063,680	-		IAI47_09750	0.63	-3.0
2,063,680	-		IAI47_09750	0.63	-3.3
2,063,710	+		IAI47_09750	0.66	-3.1