Strain Fitness in Pantoea sp. MT58 around IAI47_11705

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
2,481,151	-				-1.6
2,481,154	+				+0.7
2,481,157	-				-1.0
2,481,157	-				-0.9
2,481,157	-				-0.6
2,481,160	+				+0.4
2,481,161	-				-0.5
2,481,182	+				-1.9
2,481,182	+				-0.3
2,481,182	+				-1.2
2,481,183	-				+0.1
2,481,183	-				+1.2
2,481,183	-				-0.6
2,481,218	-				+0.0
2,481,283	+				-2.0
2,481,284	-				+0.1
2,481,286	+				-1.2
2,481,305	-				+1.0
2,481,330	-				-0.3
2,481,344	-				+0.3
2,481,359	-				-0.9
2,481,456	+				+1.9
2,481,456	+				+1.7
2,481,457	-				+1.0
2,481,457	-				-0.9
2,481,457	-				+0.5
2,481,494	+				-2.9
2,481,494	+				-0.6
2,481,494	+				+0.6
2,481,494	+				-0.4
2,481,495	-				-0.3
2,481,495	-				-0.4
2,481,500	+				+0.5
2,481,500	+				-0.5
2,481,501	-				-0.9
2,481,501	-				-0.1
2,481,513	+				-0.5
2,481,558	+				-0.8
2,481,569	+				+0.1
2,481,582	-				+2.4
2,481,596	-				+0.7
2,481,608	+				+0.3
2,481,609	-				-0.1
2,481,632	+				-0.0
2,481,668	+				+1.3
2,481,694	+				-0.4
2,481,699	+				+0.1
2,481,699	+				-0.3
2,481,700	-				+1.1
2,481,708	+				-1.0
2,481,708	+				-0.1
2,481,765	+				-0.3
2,481,792	-				+0.0
2,481,792	-				+0.2
2,481,811	-				+0.5
2,481,811	-				+1.9
2,481,878	+				+1.7
2,481,878	+				-0.0
2,481,891	-				+0.4
2,481,956	+				+0.7
2,481,962	+				-0.1
2,481,962	+				+2.3
2,481,963	-				+0.6
2,481,995	-				+1.3
2,481,995	-				+0.6
2,482,086	+				+0.0
2,482,087	-				-0.7
2,482,087	-				+1.9
2,482,087	-				-0.3
2,482,087	-				-1.3
2,482,116	+				-0.8
2,482,165	+				+0.3
2,482,204	-				+1.0
2,482,210	+		IAI47_11705	0.10	-0.6
2,482,210	+		IAI47_11705	0.10	+0.3
2,482,210	+		IAI47_11705	0.10	-1.4
2,482,210	+		IAI47_11705	0.10	+0.6
2,482,211	-		IAI47_11705	0.10	-0.3
2,482,211	-		IAI47_11705	0.10	-1.0
2,482,211	-		IAI47_11705	0.10	-0.3
2,482,211	-		IAI47_11705	0.10	-1.0
2,482,211	-		IAI47_11705	0.10	+0.5
2,482,252	-		IAI47_11705	0.13	+0.3
2,482,264	+		IAI47_11705	0.14	-0.5
2,482,264	+		IAI47_11705	0.14	-0.8
2,482,265	-		IAI47_11705	0.14	+0.5
2,482,265	-		IAI47_11705	0.14	-2.0
2,482,296	+		IAI47_11705	0.16	+0.1
2,482,296	+		IAI47_11705	0.16	-3.2
2,482,296	+		IAI47_11705	0.16	-0.9
2,482,296	+		IAI47_11705	0.16	+0.7
2,482,296	+		IAI47_11705	0.16	-1.0
2,482,297	-		IAI47_11705	0.16	+1.3
2,482,297	-		IAI47_11705	0.16	+0.0
2,482,300	+		IAI47_11705	0.16	+0.7
2,482,300	+		IAI47_11705	0.16	-0.8
2,482,300	+		IAI47_11705	0.16	+0.0
2,482,300	+		IAI47_11705	0.16	-0.0
2,482,300	+		IAI47_11705	0.16	-0.5
2,482,300	+		IAI47_11705	0.16	-0.3
2,482,300	+		IAI47_11705	0.16	-1.7
2,482,301	-		IAI47_11705	0.16	-0.3
2,482,310	-		IAI47_11705	0.17	-0.1
2,482,339	+		IAI47_11705	0.18	+0.4
2,482,339	+		IAI47_11705	0.18	-0.6
2,482,339	+		IAI47_11705	0.18	-0.9
2,482,340	-		IAI47_11705	0.19	-1.1
2,482,349	-		IAI47_11705	0.19	-0.8
2,482,428	+		IAI47_11705	0.24	-1.3
2,482,428	+		IAI47_11705	0.24	+0.4
2,482,428	+		IAI47_11705	0.24	-1.1
2,482,428	+		IAI47_11705	0.24	+0.1
2,482,429	-		IAI47_11705	0.24	+0.0
2,482,431	+		IAI47_11705	0.25	+0.5
2,482,438	+		IAI47_11705	0.25	-0.8
2,482,441	+		IAI47_11705	0.25	-0.7
2,482,441	+		IAI47_11705	0.25	+1.1
2,482,441	+		IAI47_11705	0.25	+0.7
2,482,442	-		IAI47_11705	0.25	-1.4
2,482,442	-		IAI47_11705	0.25	+0.3
2,482,515	+		IAI47_11705	0.30	-0.8
2,482,516	-		IAI47_11705	0.30	-0.6
2,482,528	+		IAI47_11705	0.31	-0.4
2,482,529	-		IAI47_11705	0.31	-1.7
2,482,529	-		IAI47_11705	0.31	+0.4
2,482,529	-		IAI47_11705	0.31	-0.6
2,482,594	+		IAI47_11705	0.35	-0.5
2,482,594	+		IAI47_11705	0.35	-0.3
2,482,595	-		IAI47_11705	0.35	-2.6
2,482,638	+		IAI47_11705	0.38	-0.1
2,482,639	-		IAI47_11705	0.38	-1.4
2,482,639	-		IAI47_11705	0.38	-0.2
2,482,639	-		IAI47_11705	0.38	-1.4
2,482,639	-		IAI47_11705	0.38	-1.1
2,482,639	-		IAI47_11705	0.38	-1.5
2,482,639	-		IAI47_11705	0.38	-0.3
2,482,639	-		IAI47_11705	0.38	-0.6
2,482,639	-		IAI47_11705	0.38	+0.0
2,482,642	+		IAI47_11705	0.38	+0.2
2,482,642	+		IAI47_11705	0.38	+0.7
2,482,642	+		IAI47_11705	0.38	+0.1
2,482,642	+		IAI47_11705	0.38	-1.4
2,482,643	-		IAI47_11705	0.38	+0.7
2,482,643	-		IAI47_11705	0.38	-1.3
2,482,643	-		IAI47_11705	0.38	-0.3
2,482,675	+		IAI47_11705	0.41	-1.2
2,482,676	-		IAI47_11705	0.41	-0.4
2,482,676	-		IAI47_11705	0.41	-0.8
2,482,732	+		IAI47_11705	0.44	-0.5
2,482,733	-		IAI47_11705	0.44	-0.6
2,482,876	+		IAI47_11705	0.54	+1.3
2,482,876	+		IAI47_11705	0.54	-0.6
2,482,876	+		IAI47_11705	0.54	-0.4
2,482,876	+		IAI47_11705	0.54	-1.5
2,482,876	+		IAI47_11705	0.54	+0.4
2,482,876	+		IAI47_11705	0.54	-1.1
2,482,877	-		IAI47_11705	0.54	+1.2
2,482,877	-		IAI47_11705	0.54	-0.3
2,483,018	-		IAI47_11705	0.63	+1.5
2,483,021	+		IAI47_11705	0.63	-0.0
2,483,021	+		IAI47_11705	0.63	+0.2
2,483,022	-		IAI47_11705	0.63	+1.6
2,483,032	+		IAI47_11705	0.64	-2.0
2,483,033	-		IAI47_11705	0.64	-0.3
2,483,072	+		IAI47_11705	0.67	+0.4
2,483,076	-		IAI47_11705	0.67	+0.2
2,483,076	-		IAI47_11705	0.67	-0.3
2,483,076	-		IAI47_11705	0.67	+0.2
2,483,095	+		IAI47_11705	0.68	+2.3
2,483,096	-		IAI47_11705	0.68	-0.8
2,483,133	+		IAI47_11705	0.71	-1.0
2,483,200	-		IAI47_11705	0.75	-1.3
2,483,277	+		IAI47_11705	0.80	-0.3
2,483,277	+		IAI47_11705	0.80	-0.7
2,483,277	+		IAI47_11705	0.80	-0.3
2,483,277	+		IAI47_11705	0.80	-0.1
2,483,401	+		IAI47_11705	0.88	+0.8
2,483,464	+				-0.0
2,483,464	+				+1.3
2,483,465	-				-1.9
2,483,465	-				-0.5
2,483,465	-				+1.0
2,483,475	+				+1.1
2,483,475	+				+0.3
2,483,475	+				+0.1
2,483,476	-				-0.4
2,483,476	-				-1.1
2,483,476	-				-0.8
2,483,476	-				-0.2
2,483,510	-				+0.4
2,483,523	+				-0.0
2,483,524	-				+1.3
2,483,534	+				+0.1
2,483,534	+				-0.1
2,483,535	-				-1.0
2,483,535	-				+0.7
2,483,571	+				-0.4
2,483,572	-				+1.7
2,483,606	+				+0.7
2,483,607	-				+0.1
2,483,607	-				+1.4
2,483,622	+				+1.7
2,483,625	+				-0.6
2,483,664	+				+0.3
2,483,695	-				+1.0
2,483,695	-				+0.4
2,483,715	+				+0.7
2,483,715	+				-1.1
2,483,715	+				+0.1
2,483,715	+				-0.7
2,483,715	+				-0.9
2,483,715	+				+0.9
2,483,716	-				+0.5
2,483,716	-				-0.3
2,483,720	-				-1.2
2,483,790	+				-1.3
2,483,791	-				-0.0
2,483,791	-				-0.1
2,483,826	+				-1.5
2,483,826	+				-1.3
2,483,826	+				-1.1
2,483,826	+				-0.6
2,483,826	+				-0.3
2,483,826	+				-0.1
2,483,827	-				+0.2
2,483,827	-				-1.9
2,483,827	-				-0.3
2,483,830	-				-0.9
2,483,869	-		IAI47_11710	0.10	-0.4
2,483,898	+		IAI47_11710	0.15	-0.1
2,483,898	+		IAI47_11710	0.15	+0.1
2,483,899	-		IAI47_11710	0.15	+0.3
2,483,899	-		IAI47_11710	0.15	-0.0
2,483,899	-		IAI47_11710	0.15	-1.1
2,483,960	+		IAI47_11710	0.26	-0.0
2,483,960	+		IAI47_11710	0.26	+1.7
2,483,960	+		IAI47_11710	0.26	-0.6
2,483,960	+		IAI47_11710	0.26	+0.4
2,483,961	-		IAI47_11710	0.26	+1.3
2,483,961	-		IAI47_11710	0.26	+3.5
2,483,961	-		IAI47_11710	0.26	-1.6
2,483,961	-		IAI47_11710	0.26	-0.7
2,483,961	-		IAI47_11710	0.26	-0.8
2,484,057	+		IAI47_11710	0.43	+0.1
2,484,107	+		IAI47_11710	0.52	+0.3
2,484,128	-		IAI47_11710	0.56	+1.1
2,484,142	+		IAI47_11710	0.59	+0.0
2,484,143	-		IAI47_11710	0.59	+0.1
2,484,217	+		IAI47_11710	0.72	+0.2
2,484,217	+		IAI47_11710	0.72	-0.0
2,484,218	-		IAI47_11710	0.72	-0.3
2,484,218	-		IAI47_11710	0.72	-0.5
2,484,218	-		IAI47_11710	0.72	-0.3
2,484,218	-		IAI47_11710	0.72	-1.4
2,484,219	+		IAI47_11710	0.72	+0.1
2,484,219	+		IAI47_11710	0.72	-0.3
2,484,219	+		IAI47_11710	0.72	-0.4
2,484,259	+		IAI47_11710	0.79	-0.4
2,484,259	+		IAI47_11710	0.79	-0.4
2,484,260	-		IAI47_11710	0.79	+0.1
2,484,260	-		IAI47_11710	0.79	+0.1
2,484,292	+		IAI47_11710	0.85	+1.2
2,484,292	+		IAI47_11710	0.85	-1.3
2,484,292	+		IAI47_11710	0.85	-0.1
2,484,292	+		IAI47_11710	0.85	+1.7
2,484,293	-		IAI47_11710	0.85	-0.6
2,484,293	-		IAI47_11710	0.85	-0.6
2,484,293	-		IAI47_11710	0.85	-0.9
2,484,347	-				+2.3
2,484,364	+				-0.9
2,484,470	+		IAI47_11715	0.15	+1.0
2,484,471	-		IAI47_11715	0.15	+1.1
2,484,471	-		IAI47_11715	0.15	-1.3
2,484,510	-		IAI47_11715	0.20	-0.2
2,484,548	+		IAI47_11715	0.25	+0.1
2,484,548	+		IAI47_11715	0.25	-0.8
2,484,549	-		IAI47_11715	0.26	+0.4
2,484,549	-		IAI47_11715	0.26	-0.9
2,484,551	-		IAI47_11715	0.26	+0.4