Strain Fitness in Pantoea sp. MT58 around IAI47_09620

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
2,035,498	+				-0.3
2,035,499	-				-0.2
2,035,499	-				+0.6
2,035,531	-				+0.3
2,035,588	+		IAI47_09615	0.12	-1.9
2,035,589	-		IAI47_09615	0.12	+0.9
2,035,589	-		IAI47_09615	0.12	+1.3
2,035,596	-		IAI47_09615	0.13	+0.7
2,035,611	+		IAI47_09615	0.15	+1.5
2,035,632	+		IAI47_09615	0.17	-0.9
2,035,632	+		IAI47_09615	0.17	+0.2
2,035,651	+		IAI47_09615	0.19	+0.1
2,035,654	-		IAI47_09615	0.20	+0.5
2,035,720	+		IAI47_09615	0.27	+0.5
2,035,935	-		IAI47_09615	0.52	-1.0
2,035,969	-		IAI47_09615	0.55	-0.3
2,036,118	+		IAI47_09615	0.72	-1.8
2,036,118	+		IAI47_09615	0.72	+1.3
2,036,118	+		IAI47_09615	0.72	-1.3
2,036,118	+		IAI47_09615	0.72	+0.1
2,036,119	-		IAI47_09615	0.72	-0.1
2,036,119	-		IAI47_09615	0.72	+0.5
2,036,119	-		IAI47_09615	0.72	+2.0
2,036,152	+		IAI47_09615	0.76	-0.6
2,036,152	+		IAI47_09615	0.76	-0.3
2,036,338	-				+0.4
2,036,338	-				-0.7
2,036,375	+				-0.3
2,036,375	+				-0.4
2,036,376	-				+0.2
2,036,394	+				-1.3
2,036,395	-				+0.3
2,036,397	+				+0.1
2,036,398	-				+0.6
2,036,442	-				+0.5
2,036,450	-				+0.6
2,036,486	+				+0.4
2,036,486	+				+0.5
2,036,486	+				+0.1
2,036,486	+				-0.4
2,036,486	+				-0.6
2,036,486	+				+0.9
2,036,486	+				+2.2
2,036,486	+				+0.4
2,036,486	+				+0.1
2,036,487	-				-0.5
2,036,487	-				-1.5
2,036,487	-				-1.9
2,036,487	-				+0.6
2,036,487	-				+1.1
2,036,669	+		IAI47_09620	0.16	+0.6
2,036,669	+		IAI47_09620	0.16	-0.2
2,036,669	+		IAI47_09620	0.16	+0.7
2,036,669	+		IAI47_09620	0.16	-0.4
2,036,669	+		IAI47_09620	0.16	+0.7
2,036,670	-		IAI47_09620	0.16	-0.8
2,036,670	-		IAI47_09620	0.16	-0.1
2,036,670	-		IAI47_09620	0.16	-0.2
2,036,670	-		IAI47_09620	0.16	+0.1
2,036,670	-		IAI47_09620	0.16	+0.5
2,036,670	-		IAI47_09620	0.16	-0.5
2,036,670	-		IAI47_09620	0.16	-0.3
2,036,670	-		IAI47_09620	0.16	+0.3
2,036,677	-		IAI47_09620	0.16	+0.1
2,036,739	+		IAI47_09620	0.22	+0.3
2,036,740	-		IAI47_09620	0.22	-1.7
2,036,751	+		IAI47_09620	0.23	+0.9
2,036,751	+		IAI47_09620	0.23	+0.3
2,036,752	-		IAI47_09620	0.23	-0.9
2,036,752	-		IAI47_09620	0.23	+0.0
2,036,802	+		IAI47_09620	0.27	+0.8
2,036,802	+		IAI47_09620	0.27	+0.7
2,036,802	+		IAI47_09620	0.27	-1.9
2,036,802	+		IAI47_09620	0.27	+0.7
2,036,802	+		IAI47_09620	0.27	-0.6
2,036,802	+		IAI47_09620	0.27	-0.7
2,036,802	+		IAI47_09620	0.27	-0.1
2,036,802	+		IAI47_09620	0.27	-0.4
2,036,802	+		IAI47_09620	0.27	-0.5
2,036,802	+		IAI47_09620	0.27	-0.9
2,036,802	+		IAI47_09620	0.27	-0.3
2,036,802	+		IAI47_09620	0.27	-0.7
2,036,802	+		IAI47_09620	0.27	+0.3
2,036,802	+		IAI47_09620	0.27	-1.6
2,036,802	+		IAI47_09620	0.27	+0.8
2,036,802	+		IAI47_09620	0.27	-2.4
2,036,802	+		IAI47_09620	0.27	+1.7
2,036,802	+		IAI47_09620	0.27	-0.5
2,036,802	+		IAI47_09620	0.27	+0.4
2,036,802	+		IAI47_09620	0.27	+0.4
2,036,803	-		IAI47_09620	0.27	+2.7
2,036,803	-		IAI47_09620	0.27	+0.5
2,036,803	-		IAI47_09620	0.27	-0.1
2,036,803	-		IAI47_09620	0.27	+1.1
2,036,803	-		IAI47_09620	0.27	+0.1
2,036,803	-		IAI47_09620	0.27	-0.4
2,036,803	-		IAI47_09620	0.27	-1.7
2,036,803	-		IAI47_09620	0.27	+0.3
2,036,803	-		IAI47_09620	0.27	+0.4
2,036,803	-		IAI47_09620	0.27	-2.1
2,036,803	-		IAI47_09620	0.27	-1.1
2,036,804	+		IAI47_09620	0.27	-0.9
2,036,804	+		IAI47_09620	0.27	-0.7
2,036,804	+		IAI47_09620	0.27	-0.1
2,036,805	-		IAI47_09620	0.27	+0.5
2,036,805	-		IAI47_09620	0.27	-0.5
2,036,805	-		IAI47_09620	0.27	-2.0
2,036,805	-		IAI47_09620	0.27	-0.5
2,036,813	+		IAI47_09620	0.28	+0.6
2,036,814	-		IAI47_09620	0.28	-0.2
2,036,871	+		IAI47_09620	0.33	-0.2
2,036,871	+		IAI47_09620	0.33	+0.3
2,036,871	+		IAI47_09620	0.33	+0.7
2,036,871	+		IAI47_09620	0.33	-0.3
2,036,871	+		IAI47_09620	0.33	+0.4
2,036,871	+		IAI47_09620	0.33	-0.8
2,036,871	+		IAI47_09620	0.33	-0.4
2,036,871	+		IAI47_09620	0.33	-0.3
2,036,872	-		IAI47_09620	0.33	-0.0
2,036,872	-		IAI47_09620	0.33	-0.1
2,036,872	-		IAI47_09620	0.33	-0.0
2,036,872	-		IAI47_09620	0.33	+0.7
2,036,872	-		IAI47_09620	0.33	+0.1
2,036,872	-		IAI47_09620	0.33	-0.4
2,036,872	-		IAI47_09620	0.33	+0.5
2,036,908	+		IAI47_09620	0.36	+1.5
2,036,996	+		IAI47_09620	0.44	+0.4
2,036,997	-		IAI47_09620	0.44	+2.5
2,036,997	-		IAI47_09620	0.44	-0.4
2,036,997	-		IAI47_09620	0.44	+2.1
2,036,999	+		IAI47_09620	0.44	-0.9
2,037,000	-		IAI47_09620	0.44	-0.3
2,037,000	-		IAI47_09620	0.44	+1.0
2,037,008	+		IAI47_09620	0.45	+0.3
2,037,008	+		IAI47_09620	0.45	-0.5
2,037,008	+		IAI47_09620	0.45	-0.4
2,037,008	+		IAI47_09620	0.45	-0.9
2,037,008	+		IAI47_09620	0.45	-0.4
2,037,008	+		IAI47_09620	0.45	-0.6
2,037,009	-		IAI47_09620	0.45	+0.2
2,037,009	-		IAI47_09620	0.45	+0.7
2,037,026	-		IAI47_09620	0.46	+0.4
2,037,102	+		IAI47_09620	0.53	+0.4
2,037,102	+		IAI47_09620	0.53	-2.6
2,037,103	-		IAI47_09620	0.53	-0.3
2,037,110	+		IAI47_09620	0.53	+0.6
2,037,110	+		IAI47_09620	0.53	-0.6
2,037,110	+		IAI47_09620	0.53	-0.5
2,037,110	+		IAI47_09620	0.53	-0.4
2,037,110	+		IAI47_09620	0.53	+0.4
2,037,110	+		IAI47_09620	0.53	-0.0
2,037,110	+		IAI47_09620	0.53	-0.6
2,037,110	+		IAI47_09620	0.53	-0.4
2,037,111	-		IAI47_09620	0.53	-0.9
2,037,111	-		IAI47_09620	0.53	-0.6
2,037,111	-		IAI47_09620	0.53	-1.9
2,037,111	-		IAI47_09620	0.53	-2.1
2,037,111	-		IAI47_09620	0.53	+0.4
2,037,111	-		IAI47_09620	0.53	-0.1
2,037,111	-		IAI47_09620	0.53	-0.4
2,037,111	-		IAI47_09620	0.53	+0.1
2,037,111	-		IAI47_09620	0.53	+0.0
2,037,111	-		IAI47_09620	0.53	+0.4
2,037,111	-		IAI47_09620	0.53	+0.9
2,037,111	-		IAI47_09620	0.53	+1.3
2,037,195	-		IAI47_09620	0.61	-0.3
2,037,288	+		IAI47_09620	0.69	-0.4
2,037,288	+		IAI47_09620	0.69	-0.3
2,037,288	+		IAI47_09620	0.69	-0.5
2,037,289	-		IAI47_09620	0.69	-0.9
2,037,289	-		IAI47_09620	0.69	+1.7
2,037,289	-		IAI47_09620	0.69	+1.0
2,037,289	-		IAI47_09620	0.69	-0.3
2,037,289	-		IAI47_09620	0.69	+1.1
2,037,327	+		IAI47_09620	0.72	+1.0
2,037,327	+		IAI47_09620	0.72	+0.4
2,037,327	+		IAI47_09620	0.72	+0.4
2,037,327	+		IAI47_09620	0.72	-2.3
2,037,328	-		IAI47_09620	0.72	+0.2
2,037,328	-		IAI47_09620	0.72	+0.5
2,037,328	-		IAI47_09620	0.72	-0.3
2,037,328	-		IAI47_09620	0.72	-0.4
2,037,328	-		IAI47_09620	0.72	+0.1
2,037,328	-		IAI47_09620	0.72	-0.1
2,037,328	-		IAI47_09620	0.72	-2.6
2,037,348	+		IAI47_09620	0.74	-1.9
2,037,348	+		IAI47_09620	0.74	+0.2
2,037,348	+		IAI47_09620	0.74	+0.7
2,037,349	-		IAI47_09620	0.74	+0.3
2,037,369	+		IAI47_09620	0.76	+0.1
2,037,369	+		IAI47_09620	0.76	-0.4
2,037,369	+		IAI47_09620	0.76	-0.4
2,037,369	+		IAI47_09620	0.76	-0.3
2,037,369	+		IAI47_09620	0.76	-0.5
2,037,369	+		IAI47_09620	0.76	-1.1
2,037,369	+		IAI47_09620	0.76	-0.9
2,037,370	-		IAI47_09620	0.76	+0.1
2,037,370	-		IAI47_09620	0.76	-0.6
2,037,370	-		IAI47_09620	0.76	+0.2
2,037,449	+		IAI47_09620	0.82	-0.3
2,037,449	+		IAI47_09620	0.82	+0.7
2,037,450	-		IAI47_09620	0.83	-0.8
2,037,450	-		IAI47_09620	0.83	+0.5
2,037,450	-		IAI47_09620	0.83	-0.6
2,037,450	-		IAI47_09620	0.83	-2.6
2,037,463	-		IAI47_09620	0.84	-0.1
2,037,463	-		IAI47_09620	0.84	-0.4
2,037,463	-		IAI47_09620	0.84	+0.7
2,037,499	+		IAI47_09620	0.87	+0.3
2,037,536	-		IAI47_09620	0.90	-2.1
2,037,536	-		IAI47_09620	0.90	-1.1
2,037,552	+				-1.0
2,037,552	+				-0.3
2,037,553	-				-0.7
2,037,553	-				+1.2
2,037,553	-				-0.7
2,037,554	+				-0.9
2,037,554	+				-0.3
2,037,555	-				-0.5
2,037,613	+				+0.1
2,037,613	+				-0.1
2,037,614	-				-0.9
2,037,614	-				-0.6
2,037,634	+				+1.7
2,037,635	-				-0.9
2,037,689	+				-1.9
2,037,690	-				-1.1
2,037,690	-				-1.7
2,037,712	+				+0.5
2,037,712	+				-0.3
2,037,712	+				-0.7
2,037,713	-				-1.2
2,037,713	-				+0.4
2,037,713	-				-1.7
2,037,713	-				-1.1
2,037,763	+				-0.1
2,037,763	+				-0.2
2,037,763	+				+1.4
2,037,763	+				+0.1
2,037,763	+				+0.4
2,037,764	-				-1.7
2,037,784	+				-0.8
2,037,785	-				-0.3
2,037,785	-				-0.4
2,037,785	-				+0.1
2,037,785	-				+0.5
2,037,785	-				+1.3
2,037,796	+		IAI47_09625	0.11	+0.4
2,037,797	-		IAI47_09625	0.11	+0.5
2,037,807	+		IAI47_09625	0.12	-0.1
2,037,875	+		IAI47_09625	0.21	-1.9
2,037,875	+		IAI47_09625	0.21	-0.2
2,037,881	+		IAI47_09625	0.21	+0.7
2,037,881	+		IAI47_09625	0.21	+0.4
2,037,983	+		IAI47_09625	0.35	+0.7
2,037,984	-		IAI47_09625	0.35	+0.6
2,038,017	-		IAI47_09625	0.39	-0.5
2,038,029	+		IAI47_09625	0.41	+0.7
2,038,029	+		IAI47_09625	0.41	+0.1
2,038,030	-		IAI47_09625	0.41	-0.5
2,038,035	-		IAI47_09625	0.41	+0.3
2,038,100	+		IAI47_09625	0.50	-0.8
2,038,101	-		IAI47_09625	0.50	-1.0
2,038,127	+		IAI47_09625	0.53	+0.7
2,038,127	+		IAI47_09625	0.53	-0.4
2,038,207	-		IAI47_09625	0.63	+1.0
2,038,207	-		IAI47_09625	0.63	+0.4
2,038,214	+		IAI47_09625	0.64	+0.7
2,038,215	-		IAI47_09625	0.64	-0.7
2,038,215	-		IAI47_09625	0.64	-0.3
2,038,215	-		IAI47_09625	0.64	+0.4
2,038,280	+		IAI47_09625	0.73	+0.7
2,038,292	+		IAI47_09625	0.74	+0.5
2,038,293	-		IAI47_09625	0.75	-0.7
2,038,456	-				+0.7
2,038,488	+				-2.2
2,038,488	+				-0.3
2,038,533	+				+2.3
2,038,533	+				-0.1
2,038,533	+				+0.4
2,038,565	+				-0.6
2,038,566	-				+0.6
2,038,566	-				+0.3
2,038,572	-				-0.1
2,038,572	-				+0.7
2,038,587	+				-0.3
2,038,587	+				-0.1
2,038,608	+				+0.1
2,038,608	+				-0.0
2,038,609	-				+1.7
2,038,609	-				-0.1
2,038,623	+		IAI47_09630	0.11	+2.9
2,038,623	+		IAI47_09630	0.11	+0.2
2,038,624	-		IAI47_09630	0.11	+0.3
2,038,625	+		IAI47_09630	0.11	+1.7
2,038,626	-		IAI47_09630	0.12	-1.3
2,038,635	+		IAI47_09630	0.14	-0.4
2,038,639	-		IAI47_09630	0.14	+0.3