Strain Fitness in Pantoea sp. MT58 around IAI47_06705

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
1,395,770	+				+0.0
1,395,771	-				+1.4
1,395,790	+				+0.3
1,395,860	+				-0.3
1,395,860	+				-1.8
1,395,861	-				+0.7
1,395,888	+				+0.0
1,395,889	-				-0.7
1,395,901	+				-0.2
1,395,902	-				-0.8
1,395,906	-				-1.6
1,395,960	+				-0.1
1,395,960	+				+0.3
1,395,960	+				+0.4
1,395,968	+				-0.2
1,395,968	+				+0.4
1,395,968	+				-0.8
1,395,968	+				+0.4
1,395,968	+				-0.0
1,395,968	+				-0.0
1,395,968	+				-0.6
1,395,968	+				+0.0
1,395,968	+				-1.6
1,395,968	+				-0.6
1,395,968	+				-0.5
1,395,969	-				+0.2
1,395,969	-				-0.1
1,395,969	-				-0.7
1,395,969	-				-1.1
1,395,969	-				+0.1
1,395,969	-				+0.4
1,395,972	+				-0.0
1,395,972	+				-0.6
1,395,972	+				-3.0
1,395,972	+				-1.2
1,395,972	+				-0.7
1,395,972	+				-0.0
1,395,972	+				-0.2
1,395,972	+				+2.1
1,395,972	+				+0.0
1,395,972	+				-1.1
1,395,972	+				+0.8
1,395,972	+				-0.9
1,395,972	+				-0.0
1,395,972	+				-0.0
1,395,972	+				-0.9
1,395,973	-				-1.1
1,395,973	-				-0.2
1,395,973	-				-1.1
1,395,973	-				-0.5
1,395,973	-				+1.0
1,395,973	-				-0.0
1,395,973	-				+0.6
1,395,973	-				+0.4
1,395,973	-				+1.1
1,395,973	-				-0.2
1,395,980	+				+0.8
1,395,993	+		IAI47_06700	0.11	+0.4
1,395,993	+		IAI47_06700	0.11	+1.0
1,396,037	-		IAI47_06700	0.16	+0.4
1,396,142	+		IAI47_06700	0.28	+0.8
1,396,142	+		IAI47_06700	0.28	+1.8
1,396,142	+		IAI47_06700	0.28	+0.1
1,396,143	-		IAI47_06700	0.28	+0.9
1,396,175	+		IAI47_06700	0.32	-0.7
1,396,176	-		IAI47_06700	0.32	+0.0
1,396,176	-		IAI47_06700	0.32	+0.0
1,396,176	-		IAI47_06700	0.32	+0.2
1,396,176	-		IAI47_06700	0.32	+0.1
1,396,299	+		IAI47_06700	0.47	+0.9
1,396,300	-		IAI47_06700	0.47	+0.2
1,396,300	-		IAI47_06700	0.47	-1.9
1,396,342	-		IAI47_06700	0.52	-0.7
1,396,361	-		IAI47_06700	0.54	+0.4
1,396,361	-		IAI47_06700	0.54	-0.2
1,396,361	-		IAI47_06700	0.54	+0.3
1,396,361	-		IAI47_06700	0.54	+1.6
1,396,376	+		IAI47_06700	0.56	-0.5
1,396,377	-		IAI47_06700	0.56	+0.3
1,396,427	+		IAI47_06700	0.62	+1.0
1,396,428	-		IAI47_06700	0.62	+0.5
1,396,454	+		IAI47_06700	0.65	-0.5
1,396,455	-		IAI47_06700	0.65	-0.8
1,396,455	-		IAI47_06700	0.65	-0.6
1,396,455	-		IAI47_06700	0.65	+0.5
1,396,503	+		IAI47_06700	0.71	+0.6
1,396,504	-		IAI47_06700	0.71	+0.8
1,396,504	-		IAI47_06700	0.71	+1.5
1,396,637	+		IAI47_06700	0.87	+1.2
1,396,637	+		IAI47_06700	0.87	+1.0
1,396,637	+		IAI47_06700	0.87	-0.2
1,396,637	+		IAI47_06700	0.87	-0.5
1,396,637	+		IAI47_06700	0.87	+0.8
1,396,637	+		IAI47_06700	0.87	+0.9
1,396,637	+		IAI47_06700	0.87	-1.0
1,396,638	-		IAI47_06700	0.87	-1.1
1,396,638	-		IAI47_06700	0.87	+1.9
1,396,638	-		IAI47_06700	0.87	+1.1
1,396,638	-		IAI47_06700	0.87	+0.8
1,396,644	+		IAI47_06700	0.88	+0.5
1,396,644	+		IAI47_06700	0.88	+0.4
1,396,644	+		IAI47_06700	0.88	-1.2
1,396,644	+		IAI47_06700	0.88	-0.8
1,396,644	+		IAI47_06700	0.88	-0.2
1,396,645	-		IAI47_06700	0.88	+1.4
1,396,710	+				+0.8
1,396,711	-				+0.8
1,396,711	-				+0.2
1,396,726	+				-0.2
1,396,726	+				-0.4
1,396,726	+				-1.8
1,396,727	-				-0.2
1,396,727	-				+0.3
1,396,727	-				+0.4
1,396,760	+				+0.9
1,396,760	+				-0.9
1,396,761	-				-0.1
1,396,761	-				-0.7
1,396,761	-				+1.1
1,396,761	-				-0.6
1,396,761	-				+1.4
1,396,767	+				+0.6
1,396,767	+				-0.1
1,396,767	+				-0.8
1,396,767	+				+0.6
1,396,886	+		IAI47_06705	0.11	-0.8
1,396,887	-		IAI47_06705	0.11	+0.8
1,396,924	+		IAI47_06705	0.15	+1.1
1,396,924	+		IAI47_06705	0.15	+0.8
1,396,924	+		IAI47_06705	0.15	-2.6
1,396,925	-		IAI47_06705	0.15	-0.6
1,396,962	+		IAI47_06705	0.18	+0.4
1,396,984	-		IAI47_06705	0.20	+1.8
1,397,017	-		IAI47_06705	0.23	+0.1
1,397,068	+		IAI47_06705	0.27	-1.0
1,397,068	+		IAI47_06705	0.27	+0.4
1,397,068	+		IAI47_06705	0.27	-0.2
1,397,068	+		IAI47_06705	0.27	+0.3
1,397,068	+		IAI47_06705	0.27	+0.9
1,397,068	+		IAI47_06705	0.27	+0.5
1,397,068	+		IAI47_06705	0.27	-0.2
1,397,069	-		IAI47_06705	0.28	-0.9
1,397,069	-		IAI47_06705	0.28	-0.1
1,397,069	-		IAI47_06705	0.28	+0.4
1,397,069	-		IAI47_06705	0.28	+1.8
1,397,079	+		IAI47_06705	0.28	-0.5
1,397,080	-		IAI47_06705	0.29	+0.1
1,397,085	+		IAI47_06705	0.29	-1.1
1,397,086	-		IAI47_06705	0.29	+0.8
1,397,086	-		IAI47_06705	0.29	-0.1
1,397,086	-		IAI47_06705	0.29	+0.5
1,397,086	-		IAI47_06705	0.29	-0.1
1,397,153	+		IAI47_06705	0.35	-1.0
1,397,154	-		IAI47_06705	0.35	+0.2
1,397,190	+		IAI47_06705	0.38	-0.3
1,397,190	+		IAI47_06705	0.38	-1.5
1,397,235	+		IAI47_06705	0.42	+1.4
1,397,235	+		IAI47_06705	0.42	-0.2
1,397,236	-		IAI47_06705	0.42	-0.7
1,397,444	+		IAI47_06705	0.61	-0.0
1,397,444	+		IAI47_06705	0.61	-0.6
1,397,445	-		IAI47_06705	0.61	-0.3
1,397,445	-		IAI47_06705	0.61	-0.2
1,397,445	-		IAI47_06705	0.61	-0.0
1,397,471	+		IAI47_06705	0.63	-0.8
1,397,471	+		IAI47_06705	0.63	+1.8
1,397,472	-		IAI47_06705	0.63	+0.4
1,397,472	-		IAI47_06705	0.63	+0.1
1,397,472	-		IAI47_06705	0.63	-0.8
1,397,472	-		IAI47_06705	0.63	-2.4
1,397,472	-		IAI47_06705	0.63	-0.5
1,397,565	+		IAI47_06705	0.72	-0.6
1,397,566	-		IAI47_06705	0.72	-0.3
1,397,584	+		IAI47_06705	0.73	+0.8
1,397,585	+		IAI47_06705	0.73	+1.4
1,397,585	+		IAI47_06705	0.73	-0.2
1,397,585	+		IAI47_06705	0.73	-0.5
1,397,585	+		IAI47_06705	0.73	+0.1
1,397,586	-		IAI47_06705	0.74	-1.0
1,397,586	-		IAI47_06705	0.74	-0.3
1,397,586	-		IAI47_06705	0.74	-0.1
1,397,589	+		IAI47_06705	0.74	-0.3
1,397,589	+		IAI47_06705	0.74	+0.0
1,397,589	+		IAI47_06705	0.74	-0.8
1,397,589	+		IAI47_06705	0.74	-1.5
1,397,589	+		IAI47_06705	0.74	-1.2
1,397,590	-		IAI47_06705	0.74	+0.2
1,397,590	-		IAI47_06705	0.74	+0.3
1,397,590	-		IAI47_06705	0.74	+0.6
1,397,590	-		IAI47_06705	0.74	-0.2
1,397,590	-		IAI47_06705	0.74	+0.4
1,397,590	-		IAI47_06705	0.74	+0.1
1,397,590	-		IAI47_06705	0.74	+0.0
1,397,590	-		IAI47_06705	0.74	+0.0
1,397,590	-		IAI47_06705	0.74	+0.4
1,397,590	-		IAI47_06705	0.74	+0.8
1,397,612	+		IAI47_06705	0.76	+0.4
1,397,613	-		IAI47_06705	0.76	+0.0
1,397,613	-		IAI47_06705	0.76	-0.6
1,397,613	-		IAI47_06705	0.76	+0.7
1,397,651	-		IAI47_06705	0.79	-0.6
1,397,741	+		IAI47_06705	0.87	-1.6
1,397,742	-		IAI47_06705	0.87	-2.0
1,397,742	-		IAI47_06705	0.87	+1.2
1,397,752	-		IAI47_06705	0.88	+0.1
1,397,775	+				-0.6
1,397,775	+				+0.3
1,397,776	-				-0.6
1,397,776	-				-0.1
1,397,776	-				+2.6
1,397,776	-				+0.8
1,397,776	-				+0.2
1,397,809	+				+0.3
1,397,809	+				+0.8
1,397,810	-				-1.0
1,397,915	+				+2.1
1,397,915	+				-0.7
1,397,915	+				+0.4
1,397,916	-				+0.6
1,397,916	-				+0.8
1,397,918	+				+0.4
1,397,918	+				-0.6
1,397,919	-				+0.3
1,397,919	-				-0.3
1,397,938	+				-0.2
1,397,938	+				-0.2
1,397,938	+				+1.1
1,397,938	+				+1.4
1,397,938	+				-1.2
1,397,939	-				-1.2
1,397,939	-				-0.8
1,397,958	+				-0.1
1,398,023	-				+0.4
1,398,023	-				-0.5
1,398,056	-		IAI47_06710	0.11	+0.6
1,398,116	-		IAI47_06710	0.17	-0.5
1,398,194	+		IAI47_06710	0.26	-0.3
1,398,216	+		IAI47_06710	0.28	+0.2
1,398,217	-		IAI47_06710	0.29	-0.8
1,398,319	+		IAI47_06710	0.40	-2.8
1,398,478	+		IAI47_06710	0.57	+0.8
1,398,478	+		IAI47_06710	0.57	-0.1
1,398,479	-		IAI47_06710	0.57	-0.6
1,398,520	+		IAI47_06710	0.62	+2.8
1,398,537	+		IAI47_06710	0.64	-0.1
1,398,538	-		IAI47_06710	0.64	+2.4
1,398,647	+		IAI47_06710	0.76	-0.7
1,398,669	+		IAI47_06710	0.78	+0.4
1,398,682	+		IAI47_06710	0.79	+0.3
1,398,683	-		IAI47_06710	0.80	-0.7
1,398,724	+		IAI47_06710	0.84	-0.9
1,398,725	-		IAI47_06710	0.84	-0.8
1,398,740	+		IAI47_06710	0.86	-0.0
1,398,741	-		IAI47_06710	0.86	-0.2
1,398,741	-		IAI47_06710	0.86	-0.4
1,398,778	+				-3.0
1,398,779	-				-0.7
1,398,779	-				-0.4
1,398,847	+				-1.0
1,398,847	+				-1.6
1,398,847	+				-2.1
1,398,847	+				+0.4
1,398,847	+				-0.0
1,398,847	+				-0.6
1,398,847	+				-0.7
1,398,847	+				-0.2
1,398,848	-				-0.1
1,398,848	-				+1.1
1,398,848	-				-0.0
1,398,848	-				+0.1
1,398,848	-				+1.4
1,398,848	-				+1.0
1,398,848	-				+0.4
1,398,848	-				-0.2
1,398,848	-				+0.4
1,398,848	-				+0.8
1,398,848	-				-0.7
1,398,848	-				-0.9
1,398,848	-				-0.2
1,398,848	-				+0.6
1,398,861	-				-0.2
1,398,861	-				-0.7