Strain Fitness in Pantoea sp. MT58 around IAI47_18095

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,847,948	-				-0.8
3,847,948	-				-1.2
3,848,077	+				-0.8
3,848,077	+				-0.4
3,848,077	+				+0.8
3,848,077	+				+0.3
3,848,077	+				-0.3
3,848,078	-				-2.3
3,848,078	-				+0.2
3,848,078	-				-1.0
3,848,097	+				+0.2
3,848,098	-				+1.8
3,848,107	+				-0.1
3,848,107	+				-0.2
3,848,107	+				+0.7
3,848,151	+				+1.0
3,848,152	-				-1.0
3,848,205	-		IAI47_18090	0.15	+0.4
3,848,205	-		IAI47_18090	0.15	-2.0
3,848,205	-		IAI47_18090	0.15	-0.2
3,848,225	+		IAI47_18090	0.18	-1.2
3,848,225	+		IAI47_18090	0.18	-1.2
3,848,226	-		IAI47_18090	0.18	-0.0
3,848,226	-		IAI47_18090	0.18	-0.2
3,848,226	-		IAI47_18090	0.18	+0.0
3,848,226	-		IAI47_18090	0.18	-0.9
3,848,289	+		IAI47_18090	0.28	-2.0
3,848,289	+		IAI47_18090	0.28	-0.4
3,848,289	+		IAI47_18090	0.28	-1.2
3,848,289	+		IAI47_18090	0.28	+0.0
3,848,290	-		IAI47_18090	0.28	-2.0
3,848,306	+		IAI47_18090	0.31	+0.3
3,848,306	+		IAI47_18090	0.31	+1.1
3,848,316	+		IAI47_18090	0.33	-1.4
3,848,316	+		IAI47_18090	0.33	+0.2
3,848,316	+		IAI47_18090	0.33	-2.5
3,848,333	+		IAI47_18090	0.35	+0.8
3,848,333	+		IAI47_18090	0.35	+0.5
3,848,334	-		IAI47_18090	0.35	+0.3
3,848,334	-		IAI47_18090	0.35	+1.8
3,848,334	-		IAI47_18090	0.35	-0.3
3,848,346	+		IAI47_18090	0.37	+0.5
3,848,346	+		IAI47_18090	0.37	+0.8
3,848,347	-		IAI47_18090	0.37	-0.3
3,848,347	-		IAI47_18090	0.37	+0.4
3,848,347	-		IAI47_18090	0.37	-2.2
3,848,347	-		IAI47_18090	0.37	-1.4
3,848,353	+		IAI47_18090	0.38	-0.4
3,848,353	+		IAI47_18090	0.38	+2.1
3,848,353	+		IAI47_18090	0.38	+1.0
3,848,353	+		IAI47_18090	0.38	-0.5
3,848,353	+		IAI47_18090	0.38	+2.2
3,848,353	+		IAI47_18090	0.38	-2.3
3,848,353	+		IAI47_18090	0.38	-0.6
3,848,353	+		IAI47_18090	0.38	+0.8
3,848,353	+		IAI47_18090	0.38	-0.7
3,848,353	+		IAI47_18090	0.38	-0.4
3,848,353	+		IAI47_18090	0.38	+1.2
3,848,354	-		IAI47_18090	0.39	+0.7
3,848,354	-		IAI47_18090	0.39	+0.2
3,848,354	-		IAI47_18090	0.39	-1.2
3,848,354	-		IAI47_18090	0.39	+0.5
3,848,354	-		IAI47_18090	0.39	-0.9
3,848,354	-		IAI47_18090	0.39	-0.2
3,848,354	-		IAI47_18090	0.39	+0.1
3,848,354	-		IAI47_18090	0.39	-1.7
3,848,354	-		IAI47_18090	0.39	+0.4
3,848,354	-		IAI47_18090	0.39	+0.8
3,848,354	-		IAI47_18090	0.39	-0.2
3,848,372	+		IAI47_18090	0.41	+1.3
3,848,478	+		IAI47_18090	0.58	+1.1
3,848,478	+		IAI47_18090	0.58	+0.2
3,848,478	+		IAI47_18090	0.58	+0.1
3,848,478	+		IAI47_18090	0.58	-1.4
3,848,478	+		IAI47_18090	0.58	-0.2
3,848,478	+		IAI47_18090	0.58	+0.4
3,848,479	-		IAI47_18090	0.59	-0.1
3,848,479	-		IAI47_18090	0.59	+0.3
3,848,479	-		IAI47_18090	0.59	+1.1
3,848,479	-		IAI47_18090	0.59	+0.2
3,848,495	+		IAI47_18090	0.61	+0.1
3,848,495	+		IAI47_18090	0.61	-1.0
3,848,513	+		IAI47_18090	0.64	-0.3
3,848,513	+		IAI47_18090	0.64	+0.5
3,848,513	+		IAI47_18090	0.64	+0.2
3,848,579	+		IAI47_18090	0.74	-0.9
3,848,579	+		IAI47_18090	0.74	-0.2
3,848,579	+		IAI47_18090	0.74	+0.5
3,848,580	-		IAI47_18090	0.75	+1.2
3,848,580	-		IAI47_18090	0.75	-0.6
3,848,580	-		IAI47_18090	0.75	-3.1
3,848,603	+		IAI47_18090	0.78	+0.1
3,848,629	+		IAI47_18090	0.82	-0.1
3,848,629	+		IAI47_18090	0.82	+0.0
3,848,636	+		IAI47_18090	0.84	+1.0
3,848,637	-		IAI47_18090	0.84	+0.3
3,848,651	+		IAI47_18090	0.86	-1.0
3,848,651	+		IAI47_18090	0.86	+0.6
3,848,651	+		IAI47_18090	0.86	-0.5
3,848,651	+		IAI47_18090	0.86	-0.4
3,848,652	-		IAI47_18090	0.86	-0.2
3,848,652	-		IAI47_18090	0.86	+0.3
3,848,652	-		IAI47_18090	0.86	+0.9
3,848,652	-		IAI47_18090	0.86	-1.2
3,848,672	+		IAI47_18090	0.89	+0.2
3,848,672	+		IAI47_18090	0.89	+0.2
3,848,737	-				+0.9
3,848,762	+				-1.0
3,848,762	+				-1.8
3,848,762	+				+0.8
3,848,763	-				-0.3
3,848,763	-				+0.4
3,848,763	-				-0.0
3,848,780	+				+0.0
3,848,780	+				+0.4
3,848,780	+				+2.4
3,848,781	-				+1.4
3,848,781	-				-1.8
3,848,781	-				-0.0
3,848,781	-				+0.3
3,848,781	-				+1.4
3,848,781	-				+1.2
3,848,781	-				-0.6
3,848,781	-				+1.1
3,848,781	-				+0.4
3,848,781	-				+0.5
3,848,855	-				-1.6
3,848,880	+				+1.4
3,848,881	-				-0.0
3,848,881	-				-0.0
3,848,933	+				+1.2
3,848,933	+				+0.8
3,848,934	-				-0.1
3,848,934	-				-0.5
3,848,935	+				+2.1
3,848,935	+				-0.5
3,848,935	+				+3.3
3,848,935	+				+2.8
3,848,935	+				-0.5
3,848,935	+				-0.5
3,848,935	+				+1.4
3,848,936	-				-1.2
3,848,936	-				+1.2
3,848,936	-				-0.3
3,848,936	-				+2.1
3,848,982	+				-1.0
3,848,983	-				+1.3
3,848,983	-				+1.1
3,848,983	-				-0.2
3,849,037	+				-1.3
3,849,038	-				-2.0
3,849,051	-				+0.6
3,849,051	-				-0.8
3,849,051	-				+1.1
3,849,051	-				+0.2
3,849,074	+				-0.1
3,849,074	+				-0.6
3,849,075	-				-0.0
3,849,230	+		IAI47_18095	0.20	-1.3
3,849,231	-		IAI47_18095	0.21	+1.6
3,849,231	-		IAI47_18095	0.21	+1.5
3,849,250	-		IAI47_18095	0.22	-0.6
3,849,250	-		IAI47_18095	0.22	+1.0
3,849,250	-		IAI47_18095	0.22	-0.2
3,849,260	+		IAI47_18095	0.23	-0.4
3,849,260	+		IAI47_18095	0.23	+0.2
3,849,260	+		IAI47_18095	0.23	+0.8
3,849,260	+		IAI47_18095	0.23	-0.5
3,849,260	+		IAI47_18095	0.23	+1.1
3,849,261	-		IAI47_18095	0.23	+0.3
3,849,264	+		IAI47_18095	0.23	-0.3
3,849,264	+		IAI47_18095	0.23	+0.8
3,849,264	+		IAI47_18095	0.23	-1.0
3,849,265	-		IAI47_18095	0.23	-0.0
3,849,265	-		IAI47_18095	0.23	+0.0
3,849,265	-		IAI47_18095	0.23	+1.0
3,849,265	-		IAI47_18095	0.23	-0.0
3,849,272	+		IAI47_18095	0.23	+0.7
3,849,272	+		IAI47_18095	0.23	-0.2
3,849,273	-		IAI47_18095	0.23	-1.2
3,849,273	-		IAI47_18095	0.23	+0.1
3,849,273	-		IAI47_18095	0.23	+0.7
3,849,273	-		IAI47_18095	0.23	+0.5
3,849,273	-		IAI47_18095	0.23	-0.2
3,849,293	-		IAI47_18095	0.25	+1.2
3,849,293	-		IAI47_18095	0.25	-0.3
3,849,306	-		IAI47_18095	0.26	-0.2
3,849,371	+		IAI47_18095	0.30	+0.1
3,849,372	+		IAI47_18095	0.30	-1.0
3,849,373	-		IAI47_18095	0.30	+0.2
3,849,374	+		IAI47_18095	0.30	+0.7
3,849,374	+		IAI47_18095	0.30	-0.1
3,849,374	+		IAI47_18095	0.30	+1.3
3,849,374	+		IAI47_18095	0.30	-0.3
3,849,374	+		IAI47_18095	0.30	+0.3
3,849,374	+		IAI47_18095	0.30	+0.5
3,849,375	-		IAI47_18095	0.30	+0.4
3,849,375	-		IAI47_18095	0.30	+0.3
3,849,375	-		IAI47_18095	0.30	-0.8
3,849,375	-		IAI47_18095	0.30	+0.8
3,849,375	-		IAI47_18095	0.30	+0.8
3,849,375	-		IAI47_18095	0.30	-1.5
3,849,375	-		IAI47_18095	0.30	+0.4
3,849,375	-		IAI47_18095	0.30	+0.1
3,849,375	-		IAI47_18095	0.30	+0.2
3,849,375	-		IAI47_18095	0.30	-2.6
3,849,375	-		IAI47_18095	0.30	-0.0
3,849,430	+		IAI47_18095	0.34	-0.2
3,849,430	+		IAI47_18095	0.34	+0.8
3,849,430	+		IAI47_18095	0.34	-0.2
3,849,430	+		IAI47_18095	0.34	+2.4
3,849,431	-		IAI47_18095	0.34	+0.1
3,849,431	-		IAI47_18095	0.34	-0.7
3,849,431	-		IAI47_18095	0.34	+0.2
3,849,431	-		IAI47_18095	0.34	+2.5
3,849,450	+		IAI47_18095	0.36	-0.5
3,849,498	+		IAI47_18095	0.39	-0.1
3,849,499	-		IAI47_18095	0.39	-0.0
3,849,499	-		IAI47_18095	0.39	+0.4
3,849,499	-		IAI47_18095	0.39	+1.0
3,849,499	-		IAI47_18095	0.39	+0.4
3,849,501	+		IAI47_18095	0.39	+0.3
3,849,501	+		IAI47_18095	0.39	+1.2
3,849,501	+		IAI47_18095	0.39	-0.5
3,849,501	+		IAI47_18095	0.39	+0.6
3,849,501	+		IAI47_18095	0.39	-0.5
3,849,501	+		IAI47_18095	0.39	+1.0
3,849,501	+		IAI47_18095	0.39	+1.4
3,849,501	+		IAI47_18095	0.39	+0.0
3,849,502	-		IAI47_18095	0.39	+0.1
3,849,502	-		IAI47_18095	0.39	-1.2
3,849,502	-		IAI47_18095	0.39	+0.4
3,849,502	-		IAI47_18095	0.39	+0.1
3,849,504	+		IAI47_18095	0.39	-0.2
3,849,504	+		IAI47_18095	0.39	-0.7
3,849,504	+		IAI47_18095	0.39	+0.5
3,849,504	+		IAI47_18095	0.39	+0.2
3,849,504	+		IAI47_18095	0.39	+0.9
3,849,504	+		IAI47_18095	0.39	+1.2
3,849,505	-		IAI47_18095	0.39	+0.5
3,849,505	-		IAI47_18095	0.39	-0.2
3,849,505	-		IAI47_18095	0.39	+0.0
3,849,505	-		IAI47_18095	0.39	+0.4
3,849,505	-		IAI47_18095	0.39	+1.5
3,849,519	-		IAI47_18095	0.40	+1.8
3,849,529	+		IAI47_18095	0.41	-0.5
3,849,529	+		IAI47_18095	0.41	+0.7
3,849,530	-		IAI47_18095	0.41	+0.1
3,849,530	-		IAI47_18095	0.41	-1.1
3,849,530	-		IAI47_18095	0.41	-1.0
3,849,530	-		IAI47_18095	0.41	+1.0
3,849,539	+		IAI47_18095	0.42	-0.1
3,849,539	+		IAI47_18095	0.42	-0.7
3,849,539	+		IAI47_18095	0.42	-0.2
3,849,540	-		IAI47_18095	0.42	+1.1
3,849,540	-		IAI47_18095	0.42	-0.4
3,849,540	-		IAI47_18095	0.42	-0.8
3,849,540	-		IAI47_18095	0.42	+1.2
3,849,540	-		IAI47_18095	0.42	-0.2
3,849,600	+		IAI47_18095	0.46	+1.8
3,849,600	+		IAI47_18095	0.46	+0.1
3,849,601	-		IAI47_18095	0.46	+1.3
3,849,601	-		IAI47_18095	0.46	+1.3
3,849,601	-		IAI47_18095	0.46	-1.0
3,849,633	+		IAI47_18095	0.48	-0.9
3,849,634	-		IAI47_18095	0.48	-1.2
3,849,634	-		IAI47_18095	0.48	+0.3
3,849,634	-		IAI47_18095	0.48	-1.4
3,849,634	-		IAI47_18095	0.48	-1.4
3,849,634	-		IAI47_18095	0.48	+0.7
3,849,663	+		IAI47_18095	0.50	-1.2
3,849,807	+		IAI47_18095	0.60	+1.8
3,849,867	+		IAI47_18095	0.64	-2.2
3,849,867	+		IAI47_18095	0.64	-0.2
3,849,867	+		IAI47_18095	0.64	+0.6
3,849,867	+		IAI47_18095	0.64	+0.1
3,849,867	+		IAI47_18095	0.64	+1.2
3,849,868	-		IAI47_18095	0.64	-0.8
3,849,868	-		IAI47_18095	0.64	+1.4
3,849,868	-		IAI47_18095	0.64	+0.6
3,849,868	-		IAI47_18095	0.64	-0.2
3,849,870	+		IAI47_18095	0.64	+0.2
3,849,870	+		IAI47_18095	0.64	-2.0
3,849,870	+		IAI47_18095	0.64	-0.1
3,849,870	+		IAI47_18095	0.64	-0.2
3,849,870	+		IAI47_18095	0.64	+0.2
3,849,870	+		IAI47_18095	0.64	-1.2
3,849,870	+		IAI47_18095	0.64	+1.2
3,849,871	-		IAI47_18095	0.65	-2.9
3,849,871	-		IAI47_18095	0.65	-1.5
3,849,871	-		IAI47_18095	0.65	-0.8
3,849,871	-		IAI47_18095	0.65	-0.5
3,849,907	+		IAI47_18095	0.67	+0.1
3,849,907	+		IAI47_18095	0.67	+0.0
3,849,907	+		IAI47_18095	0.67	+1.7
3,849,908	-		IAI47_18095	0.67	-0.2
3,849,908	-		IAI47_18095	0.67	-1.2
3,849,950	+		IAI47_18095	0.70	-0.5
3,849,950	+		IAI47_18095	0.70	-0.8
3,849,950	+		IAI47_18095	0.70	+0.8
3,849,950	+		IAI47_18095	0.70	-1.5
3,849,950	+		IAI47_18095	0.70	-0.3
3,849,951	-		IAI47_18095	0.70	+0.6
3,849,951	-		IAI47_18095	0.70	+0.8
3,849,951	-		IAI47_18095	0.70	-0.8
3,849,951	-		IAI47_18095	0.70	+0.4
3,849,962	+		IAI47_18095	0.71	-0.2
3,849,962	+		IAI47_18095	0.71	+0.4
3,849,963	-		IAI47_18095	0.71	-0.9
3,849,963	-		IAI47_18095	0.71	+0.4
3,849,963	-		IAI47_18095	0.71	+0.2
3,849,963	-		IAI47_18095	0.71	+0.8
3,850,023	+		IAI47_18095	0.75	-1.0
3,850,023	+		IAI47_18095	0.75	+0.5
3,850,024	-		IAI47_18095	0.75	-0.3
3,850,051	-		IAI47_18095	0.77	+0.5
3,850,092	+		IAI47_18095	0.80	-0.5
3,850,092	+		IAI47_18095	0.80	+0.5
3,850,092	+		IAI47_18095	0.80	+0.3
3,850,092	+		IAI47_18095	0.80	-0.3
3,850,093	-		IAI47_18095	0.80	+0.1
3,850,196	+		IAI47_18095	0.87	-0.8
3,850,196	+		IAI47_18095	0.87	-1.8
3,850,196	+		IAI47_18095	0.87	+0.8
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