Strain Fitness in Pantoea sp. MT58 around IAI47_15805

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,333,290	-				+2.2
3,333,290	-				-1.6
3,333,290	-				+1.0
3,333,290	-				+1.0
3,333,290	-				+2.8
3,333,290	-				-0.9
3,333,290	-				-0.5
3,333,292	-				-1.3
3,333,420	-				-1.1
3,334,049	-		IAI47_15805	0.34	-1.3
3,335,316	-				-2.3
3,335,320	+				-0.3
3,335,321	-				+1.1
3,335,321	-				-0.9
3,335,331	-				-2.4
3,335,550	-				+0.7
3,335,631	-		IAI47_15810	0.11	-0.3
3,335,899	-		IAI47_15810	0.21	-0.3
3,335,930	+		IAI47_15810	0.23	-1.1
3,335,962	-		IAI47_15810	0.24	-2.9
3,336,018	-		IAI47_15810	0.26	-0.9
3,336,096	+		IAI47_15810	0.29	+0.7
3,336,237	-		IAI47_15810	0.34	-1.6