Strain Fitness in Pantoea sp. MT58 around IAI47_14055

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
2,969,026	+				-0.6
2,969,031	+				-1.2
2,969,032	-				+0.3
2,969,079	+				+0.8
2,969,085	+				-0.9
2,969,738	+				+1.0
2,969,741	-				-0.8
2,969,741	-				+1.3
2,969,759	+				+0.9
2,969,759	+				-0.1
2,969,759	+				-0.8
2,969,759	+				+1.3
2,969,759	+				+0.9
2,969,760	-				+1.4
2,969,760	-				+1.5
2,969,760	-				-0.2
2,969,760	-				+1.2
2,969,790	+				-0.7
2,969,790	+				+1.1
2,969,790	+				-0.2
2,969,791	-				+2.8
2,969,791	-				-0.2
2,969,791	-				+0.2
2,969,791	-				-0.0
2,969,791	-				+0.1
2,969,794	+				+0.3
2,969,794	+				+0.3
2,969,794	+				-0.6
2,969,794	+				-0.4
2,969,794	+				+0.6
2,969,794	+				+0.0
2,969,799	+				+0.1
2,969,800	-				-0.6
2,969,840	+				-2.7
2,969,840	+				+0.6
2,969,937	+				+0.4
2,970,874	-				-0.6
2,970,902	-				+0.2
2,970,902	-				-1.6
2,970,902	-				+1.8
2,970,902	-				-0.7
2,970,902	-				-0.4
2,970,967	+				+0.0
2,970,993	-				-0.0
2,970,999	+				-1.0
2,971,006	+				+2.0
2,971,006	+				+0.5
2,971,007	-				-0.7
2,971,007	-				-2.5
2,971,019	+				+0.1
2,971,057	-		IAI47_14060	0.15	-2.7
2,971,089	-		IAI47_14060	0.31	+0.3
2,971,089	-		IAI47_14060	0.31	-0.3
2,971,089	-		IAI47_14060	0.31	+0.2
2,971,121	+		IAI47_14060	0.47	-0.7
2,971,122	-		IAI47_14060	0.47	-2.0
2,971,167	-		IAI47_14060	0.69	+0.0
2,971,180	-		IAI47_14060	0.75	-1.6
2,971,185	-		IAI47_14060	0.78	+0.2
2,971,185	-		IAI47_14060	0.78	+1.8
2,971,185	-		IAI47_14060	0.78	-0.9
2,971,185	-		IAI47_14060	0.78	-1.2
2,971,214	+				+2.1
2,971,215	-				-0.5
2,971,215	-				+0.9
2,971,215	-				-1.2
2,971,215	-				-0.8
2,971,215	-				-0.2
2,971,215	-				+0.9
2,971,220	+				+0.2
2,971,221	-				-0.1
2,971,221	-				-0.9
2,971,221	-				-0.6
2,971,221	-				-0.7
2,971,221	-				-1.4
2,971,221	-				+1.8
2,971,229	+				-1.6
2,971,229	+				+0.2
2,971,229	+				+0.8
2,971,229	+				+0.4
2,971,230	-				+1.2
2,971,230	-				+0.3
2,971,230	-				-0.4
2,971,230	-				+0.3
2,971,230	-				+0.8
2,971,230	-				+0.1
2,971,230	-				+0.5
2,971,230	-				+0.5
2,971,233	+				-1.7
2,971,234	-				-0.7
2,971,246	+				-2.0
2,971,247	-				-0.0
2,971,247	-				-1.7
2,971,272	-				-0.4
2,971,308	-				-1.6
2,971,336	+				+1.1
2,971,336	+				-0.2
2,971,336	+				-2.1
2,971,336	+				+0.2
2,971,336	+				-1.1
2,971,336	+				-0.5
2,971,336	+				-1.0
2,971,337	-				-0.3
2,971,337	-				+1.6
2,971,337	-				+0.5
2,971,337	-				+0.5
2,971,337	-				+1.0
2,971,337	-				-2.1
2,971,337	-				-1.1
2,971,337	-				+0.3
2,971,337	-				+1.1
2,971,340	+				-0.1
2,971,340	+				-0.2
2,971,340	+				-0.8
2,971,340	+				+0.6
2,971,340	+				+1.1
2,971,340	+				+0.4
2,971,399	+				+0.8
2,971,399	+				-0.2
2,971,399	+				-0.2
2,971,399	+				+0.4
2,971,399	+				+0.3
2,971,399	+				-0.2
2,971,399	+				+0.4
2,971,400	-				-0.4
2,971,400	-				+1.3
2,971,400	-				+0.1
2,971,464	+				-0.8
2,971,499	+		IAI47_14065	0.12	-0.6
2,971,499	+		IAI47_14065	0.12	-0.0
2,971,499	+		IAI47_14065	0.12	-0.9
2,971,499	+		IAI47_14065	0.12	-0.1
2,971,499	+		IAI47_14065	0.12	+1.0
2,971,499	+		IAI47_14065	0.12	+0.9
2,971,499	+		IAI47_14065	0.12	-0.2
2,971,500	-		IAI47_14065	0.12	+0.3
2,971,500	-		IAI47_14065	0.12	-0.7
2,971,500	-		IAI47_14065	0.12	-1.7
2,971,500	-		IAI47_14065	0.12	-0.3
2,971,500	-		IAI47_14065	0.12	-0.1
2,971,567	+		IAI47_14065	0.21	-0.8
2,971,568	-		IAI47_14065	0.21	+0.2
2,971,568	-		IAI47_14065	0.21	-0.2
2,971,600	+		IAI47_14065	0.25	-0.2
2,971,600	+		IAI47_14065	0.25	-0.9
2,971,600	+		IAI47_14065	0.25	+0.5
2,971,600	+		IAI47_14065	0.25	+0.4
2,971,600	+		IAI47_14065	0.25	-0.2
2,971,601	-		IAI47_14065	0.25	+0.5
2,971,601	-		IAI47_14065	0.25	+0.8
2,971,601	-		IAI47_14065	0.25	-0.4
2,971,601	-		IAI47_14065	0.25	+0.2
2,971,601	-		IAI47_14065	0.25	+1.1
2,971,601	-		IAI47_14065	0.25	-1.0
2,971,601	-		IAI47_14065	0.25	+0.8
2,971,602	+		IAI47_14065	0.25	-1.2
2,971,602	+		IAI47_14065	0.25	+0.7
2,971,602	+		IAI47_14065	0.25	+0.1
2,971,602	+		IAI47_14065	0.25	+0.4
2,971,602	+		IAI47_14065	0.25	+0.1
2,971,602	+		IAI47_14065	0.25	-0.3
2,971,602	+		IAI47_14065	0.25	+0.9
2,971,602	+		IAI47_14065	0.25	+1.7
2,971,602	+		IAI47_14065	0.25	-0.4
2,971,602	+		IAI47_14065	0.25	+0.2
2,971,602	+		IAI47_14065	0.25	+1.0
2,971,603	-		IAI47_14065	0.25	-0.3
2,971,603	-		IAI47_14065	0.25	-0.2
2,971,603	-		IAI47_14065	0.25	-0.6
2,971,603	-		IAI47_14065	0.25	-1.6
2,971,603	-		IAI47_14065	0.25	-0.1
2,971,603	-		IAI47_14065	0.25	+0.8
2,971,603	-		IAI47_14065	0.25	-2.6
2,971,603	-		IAI47_14065	0.25	+1.6
2,971,603	-		IAI47_14065	0.25	-0.6
2,971,638	-		IAI47_14065	0.30	-0.9
2,971,749	+		IAI47_14065	0.44	-0.6
2,971,749	+		IAI47_14065	0.44	+0.6
2,971,749	+		IAI47_14065	0.44	-0.7
2,971,749	+		IAI47_14065	0.44	+0.5
2,971,749	+		IAI47_14065	0.44	-1.0
2,971,749	+		IAI47_14065	0.44	+0.9
2,971,749	+		IAI47_14065	0.44	-0.6
2,971,749	+		IAI47_14065	0.44	-0.6
2,971,749	+		IAI47_14065	0.44	-2.7
2,971,749	+		IAI47_14065	0.44	+0.3
2,971,749	+		IAI47_14065	0.44	-0.2
2,971,750	-		IAI47_14065	0.44	-0.1
2,971,750	-		IAI47_14065	0.44	-2.2
2,971,750	-		IAI47_14065	0.44	+0.4
2,971,750	-		IAI47_14065	0.44	+0.6
2,971,750	-		IAI47_14065	0.44	-0.5
2,971,750	-		IAI47_14065	0.44	-0.5
2,971,750	-		IAI47_14065	0.44	+0.3
2,971,750	-		IAI47_14065	0.44	+0.3
2,971,750	-		IAI47_14065	0.44	+0.6
2,971,750	-		IAI47_14065	0.44	-0.9
2,971,760	+		IAI47_14065	0.45	+1.3
2,971,774	+		IAI47_14065	0.47	+0.8
2,971,774	+		IAI47_14065	0.47	-1.2
2,971,851	+		IAI47_14065	0.57	-0.6
2,971,851	+		IAI47_14065	0.57	-2.0
2,971,852	-		IAI47_14065	0.57	+0.8
2,971,852	-		IAI47_14065	0.57	+0.1
2,971,852	-		IAI47_14065	0.57	+1.5
2,971,869	+		IAI47_14065	0.59	-0.8
2,971,869	+		IAI47_14065	0.59	-0.5
2,971,869	+		IAI47_14065	0.59	-0.2
2,971,869	+		IAI47_14065	0.59	-0.8
2,971,870	-		IAI47_14065	0.59	+0.3
2,971,870	-		IAI47_14065	0.59	-0.2
2,971,879	+		IAI47_14065	0.60	+0.2
2,971,879	+		IAI47_14065	0.60	+0.0
2,971,879	+		IAI47_14065	0.60	-0.8